EY666004

Overview
NameEY666004
Unique NameEY666004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7943 contig Csv1_Contig7943:46..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY666004 vs. ExPASy Swiss-Prot
Match: SDR1_ARATH ((+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.761e-30
Identity = 68/109 (62.39%), Postives = 89/109 (81.65%), Query Frame = 3
Query:    3 VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTL-SGFIEEGVARGKM-TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 323
            ++FHQLDVADPA+I S+A+F+++ FGKLDILVNNAGI GI +DA+ L +G  +EG    ++ T+TYE  E+C++ NY G KRMCEA IPLL+LSDS RIVNVSSS+G+L
Sbjct:   61 LLFHQLDVADPASITSLAEFVKTQFGKLDILVNNAGIGGIITDAEALRAGAGKEGFKWDEIITETYELTEECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGQL 169          

HSP 2 Score: 58.9214 bits (141), Expect = 3.230e-12
Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 1
Query:  547 VTHEWAKGVFSDAENLTQERVDEVLNHYLNDYQEGPRKLKD 669
            V +EWAKG+ SDAENLT+ER+D+V+N  LND++EG  K K+
Sbjct:  172 VLNEWAKGILSDAENLTEERIDQVINQLLNDFKEGTVKEKN 212          

HSP 3 Score: 33.8834 bits (76), Expect = 3.230e-12
Identity = 16/44 (36.36%), Postives = 25/44 (56.82%), Query Frame = 3
Query:  648 GSPETKGWPANAPAYILSKASINAYPGILGQKDRKFLPSYCACP 779
            G+ + K W     AY++SKAS+N Y  +L +K  +F  +   CP
Sbjct:  206 GTVKEKNWAKFMSAYVVSKASLNGYTRVLAKKHPEFRVN-AVCP 248          
BLAST of EY666004 vs. ExPASy Swiss-Prot
Match: SDR2_ARATH (Short-chain dehydrogenase/reductase 2 OS=Arabidopsis thaliana GN=SDR2 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.122e-30
Identity = 62/109 (56.88%), Postives = 87/109 (79.82%), Query Frame = 3
Query:    3 VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTL-SGFIEEGVA-RGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 323
            ++FHQLDV+DP ++ S+A+F+++HFGKLDIL+NNAG+ G+ +D D L +G  +EG      +T+TYE AE+C++ NY G KRMCEA IPLLQLSDS RI+NVSS +G++
Sbjct:   61 IVFHQLDVSDPVSVTSLAEFVKTHFGKLDILINNAGVGGVITDVDALRAGTGKEGFKWEETITETYELAEECIKINYYGPKRMCEAFIPLLQLSDSPRIINVSSFMGQV 169          
BLAST of EY666004 vs. ExPASy Swiss-Prot
Match: SALR_PAPBR (Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.445e-26
Identity = 66/122 (54.10%), Postives = 80/122 (65.57%), Query Frame = 3
Query:    3 VIFHQLDVADP-AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFI--------------EEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 323
            V+FHQLDV DP   + S+ADFI++ FGKLDILVNNAG+ G S DAD     I              E+  A+  M++TYE AE+CL+ NY G K + E L+PLLQLSDS RIVNVSSS G L
Sbjct:   64 VVFHQLDVTDPITTMSSLADFIKARFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEEVVKIYEKPEAQELMSETYELAEECLKINYYGVKSVTEVLLPLLQLSDSPRIVNVSSSTGSL 185          
BLAST of EY666004 vs. ExPASy Swiss-Prot
Match: MNR1_CAPAN ((+)-neomenthol dehydrogenase OS=Capsicum annuum GN=MNR1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.136e-23
Identity = 60/126 (47.62%), Postives = 84/126 (66.67%), Query Frame = 3
Query:    3 VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADT------LSGFI------EEGVARGKMTQT-------YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 323
            ++FHQLD+ DPA+I S+ + I++ FG+LDIL+NNAGI+G+  + D       L  +I      +E    G  T++       YE  ++C++TNY GAKRM EA IPLLQLS+S RIVNV+SS+GKL
Sbjct:   63 ILFHQLDIMDPASISSLVNLIKTKFGRLDILINNAGISGVMVEGDVQVLKEILERYISIVFTEDENGEEGGWTKSGPGSVTNYELTKECIETNYYGAKRMTEAFIPLLQLSNSPRIVNVASSMGKL 188          
The following BLAST results are available for this feature:
BLAST of EY666004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
SDR1_ARATH4.761e-3062.39(+)-neomenthol dehydrogenase OS=Arabidopsis thalia... [more]
SDR2_ARATH8.122e-3056.88Short-chain dehydrogenase/reductase 2 OS=Arabidops... [more]
SALR_PAPBR2.445e-2654.10Salutaridine reductase OS=Papaver bracteatum GN=SA... [more]
MNR1_CAPAN1.136e-2347.62(+)-neomenthol dehydrogenase OS=Capsicum annuum GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-011-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666004 ID=EY666004; Name=EY666004; organism=Citrus sinensis; type=EST; length=821bp
ATGTGATCTTTCATCAGCTTGATGTTGCAGACCCTGCTGCTATTCACTCT
GTAGCTGATTTCATTCGAAGTCATTTTGGAAAGCTTGATATTTTGGTAAA
TAATGCAGGGATTACTGGAATCAGTTCGGATGCTGATACTTTGTCAGGTT
TTATTGAGGAAGGTGTTGCAAGAGGAAAAATGACTCAAACTTATGAGTCA
GCTGAAAAGTGCCTGCAAACAAACTACTTGGGGGCCAAAAGAATGTGTGA
AGCACTCATTCCTCTCCTCCAGTTATCCGATTCAGCAAGAATTGTTAATG
TATCCTCTTCCTTGGGAAAGTTGATGGTAAAACAGTTTTACAGCCCTTTA
TAAAATTGAACTAGTTGACATTCAGGTAATTAAGCCCAATTTGGCCGCTA
AATTTTGCTTCCACTGCATCTGATATTCCCTTATAATTACCTGTAGATCG
ATATTGGAGTACTCCTTGTCTCAATTTTAATTATGATTAAGTTCATTGGA
ATCATGAAGGTTGAAATTTCTGTTTCTCATCATTTTCTTTCAGTATGTAA
CACATGAATGGGCCAAAGGAGTGTTTAGTGATGCTGAGAACCTCACACAA
GAAAGAGTGGATGAGGTATTGAACCACTATCTAAATGATTACCAAGAGGG
TCCCCGGAAACTAAAGGATGGCCTGCTAATGCACCTGCTTACATACTATC
AAAAGCCAGTATTAATGCCTACCCAGGGATCCTGGGCCAGAAAGACCGCA
AATTTTTGCCTTCATATTGTGCTTGCCCCTGGCTTAGGTATAACCCAGAA
CGGACCCACAAGCGCCGTGGA
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