EY666003

Overview
NameEY666003
Unique NameEY666003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_ARATH (Cytoplasmic tRNA 2-thiolation protein 1 OS=Arabidopsis thaliana GN=NCS6 PE=2 SV=2)

HSP 1 Score: 303.138 bits (775), Expect = 1.370e-81
Identity = 147/183 (80.33%), Postives = 166/183 (90.71%), Query Frame = 1
Query:  235 ESKSKKA-GGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            E+K+KKA   RLC  CN R+  LKRPKTL+QICRECFYEVFEEEIHQVIV N+LFK+GER+AIGASGGKDSTVLA+VLSELNRRHNYGLDLFLLSIDEGI+GYRDDSL+TVKRNE+QYGLPLKIVSYKDLYGWTMDEIVK+IGLKNNCTFCG FR QALDR A+L+K +++ T HNA + A+T
Sbjct:    2 EAKNKKAVASRLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGERVAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGLPLKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDIAET 184          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_ORYSJ (Cytoplasmic tRNA 2-thiolation protein 1 OS=Oryza sativa subsp. japonica GN=NCS6 PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 1.085e-78
Identity = 141/177 (79.66%), Postives = 157/177 (88.70%), Query Frame = 1
Query:  250 KAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            +AG RLC+ C +RKAALKRPKTLEQICRECFY VFE+EIHQ IV N LFK G+R+AIGASGGKDSTVLA+VLSELNRRH Y LDLFLLS+DEGI+GYRDDSL+TVKRNEIQYGLPLKIVSYKDLYGWTMD+IVK IGLKNNCTFCG FR QALDR A+L+K  +I T HNA + A+T
Sbjct:   14 RAGSRLCTRCGERKAALKRPKTLEQICRECFYVVFEDEIHQTIVDNNLFKPGDRVAIGASGGKDSTVLAYVLSELNRRHKYCLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADDIAET 190          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_CHLRE (Cytoplasmic tRNA 2-thiolation protein 1 OS=Chlamydomonas reinhardtii GN=NCS6 PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 4.570e-69
Identity = 124/173 (71.68%), Postives = 143/173 (82.66%), Query Frame = 1
Query:  262 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            RLC  CN  +A L RPKT EQ+CRECF+  FEEE+HQ IV N+LFK GER+A+ ASGGKDSTVLA ++S LN R+NYGLDLFLLSIDEGI+GYRDDSL+TVKRNE QYG+PLK+VSYK+LYGWTMDEIV  IG KNNCTFCG FR QALDR A L+   +IAT HNA + A+T
Sbjct:    4 RLCVRCNTSRAMLNRPKTQEQVCRECFFTAFEEEVHQTIVDNKLFKHGERLAVAASGGKDSTVLAHIMSTLNARYNYGLDLFLLSIDEGITGYRDDSLETVKRNEQQYGIPLKVVSYKELYGWTMDEIVSQIGTKNNCTFCGVFRRQALDRGAVLMGANKIATGHNADDVAET 176          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_DICDI (Cytoplasmic tRNA 2-thiolation protein 1 OS=Dictyostelium discoideum GN=ctu1 PE=2 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 2.773e-66
Identity = 118/182 (64.84%), Postives = 146/182 (80.22%), Query Frame = 1
Query:  235 ESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            E+ + K   +LC  CN  +  LKRPKT E IC+ECFY VFE+EIH  I+ N LFK G+R+AIGASGGKDSTVLA +++ LN++++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SYK+LY WTMD+IVK IGLK NCTFCG FR QALDR A ++K  +I T HNA + A+T
Sbjct:    2 ENTATKKKSKLCEVCNVSRPVLKRPKTGEMICKECFYTVFEDEIHHTIISNNLFKRGDRVAIGASGGKDSTVLAEIMTLLNKKYDYGLDLFLLSIDEGITGYRDDSLETVKRNQEQYQIPLKILSYKELYNWTMDDIVKEIGLKGNCTFCGVFRRQALDRGAVMLKANKIVTGHNADDIAET 183          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_ASHGO (Cytoplasmic tRNA 2-thiolation protein 1 OS=Ashbya gossypii GN=NCS6 PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 2.197e-63
Identity = 112/179 (62.57%), Postives = 142/179 (79.33%), Query Frame = 1
Query:  244 SKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            +K   G+LC  C+ RKA +KRPK L+++C+ CF+ VFE EIH  I+ N+LF+ GER+A+GASGGKDSTVLA++L  LN RH+YGL++ LLSIDEGI GYRDDSL TVKRN+ QYGLPLKIVSYKDLY WTMDEIV   G++N+CT+CG FR QALDR A+++    + T HNA + A+T
Sbjct:   12 AKVTAGQLCELCHARKALVKRPKNLQKVCKLCFFHVFETEIHNTIMENKLFQRGERVAVGASGGKDSTVLAYILKLLNERHDYGLEIVLLSIDEGIVGYRDDSLATVKRNQEQYGLPLKIVSYKDLYDWTMDEIVACAGMRNSCTYCGVFRRQALDRGAAMLDIHHVVTGHNADDMAET 190          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_USTMA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Ustilago maydis GN=NCS6 PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.894e-63
Identity = 113/173 (65.32%), Postives = 137/173 (79.19%), Query Frame = 1
Query:  262 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            +LC  CN  +A L+RPKT +QIC+ECF+ VFE E+H  IV N LFK G+R+AIGASGGKDSTVLA  +  LN R++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY LPLK++ Y +LYGWTMD+IVK +G KNNCTFCG FR QALDR A+ +    I T HNA + A+T
Sbjct:    4 KLCVICNAERAVLRRPKTAQQICKECFFYVFETEVHHTIVSNNLFKRGDRVAIGASGGKDSTVLAHCMKVLNERYDYGLDLFLLSIDEGITGYRDDSLETVKRNQQQYQLPLKVLGYGELYGWTMDDIVKSVGRKNNCTFCGVFRRQALDRGAAALGVDHIVTGHNADDVAET 176          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_KLULA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Kluyveromyces lactis GN=NCS6 PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.894e-63
Identity = 113/173 (65.32%), Postives = 138/173 (79.77%), Query Frame = 1
Query:  262 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            +LC  C+ RKA +KRPK L++IC+ECF+ VFE EIH  IV N LF  GERIA+GASGGKDSTVLA+VL  LN RH+YG+++ LLSIDEGI GYRDDSL TVKRN++QY LPL+IVSYKDLY WTMDEIV   G++N+CT+CG FR QALDR A+ +  K + T HNA + A+T
Sbjct:   18 QLCELCHARKAVMKRPKNLQRICKECFFSVFETEIHNTIVSNNLFHRGERIAVGASGGKDSTVLAYVLKLLNDRHDYGVEIVLLSIDEGIVGYRDDSLATVKRNQVQYDLPLEIVSYKDLYNWTMDEIVACAGIRNSCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDMAET 190          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_XENTR (Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis GN=ctu1 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.424e-62
Identity = 112/171 (65.50%), Postives = 137/171 (80.12%), Query Frame = 1
Query:  268 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            CS+C +R+A L+RPKT   +C++CF+  FEEEIH  IV  +LF  GE++ IGASGGKDSTVLA VL  LN R+ YGLDL L+S+DEGISGYRDDSL+TVKRN+ QY LPLKIVSY++LYGWTMD+IVK +GLKNNCTFCG FR QALDR A ++   +I T HNA + A+T
Sbjct:    5 CSSCEERRAVLRRPKTGHSLCKDCFFHAFEEEIHHTIVSAKLFNPGEKVGIGASGGKDSTVLAHVLKVLNERYAYGLDLILVSVDEGISGYRDDSLETVKRNQQQYELPLKIVSYQELYGWTMDQIVKQVGLKNNCTFCGVFRRQALDRGAMMLGVNKICTGHNADDIAET 175          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_CRYNE (Cytoplasmic tRNA 2-thiolation protein 1 OS=Cryptococcus neoformans GN=NCS6 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.860e-62
Identity = 113/172 (65.70%), Postives = 142/172 (82.56%), Query Frame = 1
Query:  268 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIV-GNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            CS C+  +A +KRPKT +Q+C++CF+EVFE E+H  IV G  +FK GER+AIGASGGKDSTVLA VLS LN+R++YGLDL+LLSIDEGI+GYRDDSL+TVK+N+ +YGLPLKI+SY +LYGWTMD+IV+ +G KNNCTFCG FR QALDR A+ +    I T HNA + A+T
Sbjct:    6 CSLCHTARALVKRPKTGQQVCKDCFFEVFETEVHNTIVEGEGIFKRGERVAIGASGGKDSTVLAHVLSVLNKRYDYGLDLYLLSIDEGITGYRDDSLETVKQNQAEYGLPLKILSYSELYGWTMDKIVEQVGKKNNCTFCGVFRRQALDRGAAQLGVDHIVTGHNADDIAET 177          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_LACBS (Cytoplasmic tRNA 2-thiolation protein 1 OS=Laccaria bicolor (strain S238N-H82) GN=NCS6 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 7.067e-62
Identity = 112/171 (65.50%), Postives = 135/171 (78.95%), Query Frame = 1
Query:  268 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            C+ C + KA +KRPKT EQICRECF+ VFE E+H  I    LFK G+R+AIGASGGKDSTVLA+V+  LN R+ YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SY +LYGWTMD IV  +G KNNCTFCG FR QALDR A+++    I T HNA + A+T
Sbjct:    6 CAICQKAKAMVKRPKTGEQICRECFFYVFETEVHNTITQANLFKPGDRVAIGASGGKDSTVLAYVMKMLNERYQYGLELFLLSIDEGITGYRDDSLETVKRNQQQYDMPLKILSYDELYGWTMDAIVSQVGRKNNCTFCGVFRRQALDRGAAMLNVDHIVTGHNADDIAET 176          
The following BLAST results are available for this feature:
BLAST of EY666003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
CTU1_ARATH1.370e-8180.33Cytoplasmic tRNA 2-thiolation protein 1 OS=Arabido... [more]
CTU1_ORYSJ1.085e-7879.66Cytoplasmic tRNA 2-thiolation protein 1 OS=Oryza s... [more]
CTU1_CHLRE4.570e-6971.68Cytoplasmic tRNA 2-thiolation protein 1 OS=Chlamyd... [more]
CTU1_DICDI2.773e-6664.84Cytoplasmic tRNA 2-thiolation protein 1 OS=Dictyos... [more]
CTU1_ASHGO2.197e-6362.57Cytoplasmic tRNA 2-thiolation protein 1 OS=Ashbya ... [more]
CTU1_USTMA4.894e-6365.32Cytoplasmic tRNA 2-thiolation protein 1 OS=Ustilag... [more]
CTU1_KLULA4.894e-6365.32Cytoplasmic tRNA 2-thiolation protein 1 OS=Kluyver... [more]
CTU1_XENTR1.424e-6265.50Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus... [more]
CTU1_CRYNE1.860e-6265.70Cytoplasmic tRNA 2-thiolation protein 1 OS=Cryptoc... [more]
CTU1_LACBS7.067e-6265.50Cytoplasmic tRNA 2-thiolation protein 1 OS=Laccari... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-011-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666003 ID=EY666003; Name=EY666003; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGCCCACGCGTCCGTGAGAAGGTCCAGAGACTTTGGAGGGG
TGAGGGTGCCGGTCGGACCGCTGCTTTCATAACAGTTCCATTCCGAGAAG
CTGTTGCCGCACTGCAAAAGCAAACTCAAATCTTCAATTTTTCCCTCATA
ACCCAAACTTGATCTCTTGTAAGTCTGTTAGCTTGTCTCTTCATAGTTTA
CTTAGTGGGCCATTAACCGTCAATGGAGGTCGCCGAGTCGAAGTCCAAGA
AGGCCGGTGGCCGCCTTTGTTCCACCTGTAACCAGAGAAAGGCTGCCCTC
AAACGACCTAAAACCCTAGAACAGATATGTAGGGAGTGTTTCTATGAGGT
ATTTGAGGAGGAGATCCACCAAGTCATTGTGGGCAATCAGCTATTCAAGG
CTGGTGAGCGTATTGCCATCGGCGCCTCTGGTGGAAAAGATTCCACTGTC
CTTGCTTTTGTGTTGTCAGAGCTGAACCGGCGTCACAACTATGGCCTTGA
TCTTTTCCTCCTATCAATTGATGAAGGCATTTCAGGATACAGGGATGATT
CACTTCAAACTGTCAAAAGAAATGAAATTCAGTATGGTCTGCCACTGAAG
ATTGTTTCATACAAGGATTTATATGGATGGACAATGGATGAGATAGTGAA
GGTGATCGGTTTAAAGAATAATTGCACCTTTTGTGGGGGTTTTCGCCCGC
AGGCCCTTGATCGAAGTGCTTCCTTGGTGAAAGGGAAACAGATTGCAACG
GAACATAATGCAAAGGAATTTGCGCAAACTGGCTAATGAAAATATGGCGA
GTGAAATTGCTAAATGAGTAAATGACATTGAAAAAAACTGGGAGAAAAGA
ACCGATCCAAGAAGCGACCTGTTAAGGCCCTTGAACGGAGAGGT
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