CK939296

Overview
NameCK939296
Unique NameCK939296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length124
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2178 contig Csv1_Contig2178:384..507. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK939296 vs. ExPASy Swiss-Prot
Match: MPK3_ARATH (Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana GN=MPK3 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.976e-11
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = -2 
Query:    1 AVKDVVPPPLRREFTXXYIAAELMDTDLYQITRSNQSLSEE 123
            A++DVVPPPLRR+F+  YI+ ELMDTDL+QI RSNQSLSEE
Sbjct:   99 AIRDVVPPPLRRQFSDVYISTELMDTDLHQIIRSNQSLSEE 139
The following BLAST results are available for this feature:
BLAST of CK939296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MPK3_ARATH1.976e-1175.61Mitogen-activated protein kinase 3 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004752_E11 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IVF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939296 ID=CK939296; Name=CK939296; organism=Citrus sinensis; type=EST; length=124bp
CTCCTCGGATAAACTTTGATTTGAGCGAGTAATTTGGTAAAGGTCAGTGT
CCATGAGTTCCGCAGCAATATAGNNNTCAGTGAATTCTCTTCGTAACGGT
GGGGGGACCACATCTTTTACAGCT
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