CK939294

Overview
NameCK939294
Unique NameCK939294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length172
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1266 contig Csv1_Contig1266:104..285. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939294 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.362e-12
Identity = 32/37 (86.49%), Postives = 37/37 (100.00%), Query Frame = 3
Query:   60 MANAASGMAIDDDCKLKFLELKAKRTYRFIVFKIEEK 170
            MANAASGMA+DD+CKLKFLELKAKRTYRFI++KI+EK
Sbjct:    1 MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEK 37          
BLAST of CK939294 vs. ExPASy Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.362e-12
Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 3
Query:   60 MANAASGMAIDDDCKLKFLELKAKRTYRFIVFKIEEK 170
            MANAASGMA+ DDCKLKFLELKAKRTYRFI++KIEEK
Sbjct:    1 MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEK 37          
BLAST of CK939294 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.828e-12
Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 3
Query:   60 MANAASGMAIDDDCKLKFLELKAKRTYRFIVFKIEEK 170
            MANAASGMA+ DDCKL+FLELKAKRT+RFIV+KIEEK
Sbjct:    1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEK 37          
BLAST of CK939294 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.828e-12
Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 3
Query:   60 MANAASGMAIDDDCKLKFLELKAKRTYRFIVFKIEEK 170
            MANAASGMA+ DDCKL+FLELKAKRT+RFIV+KIEEK
Sbjct:    1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEK 37          
BLAST of CK939294 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.828e-12
Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 3
Query:   60 MANAASGMAIDDDCKLKFLELKAKRTYRFIVFKIEEK 170
            MANAASGMA+ DDCKL+FLELKAKRT+RFIV+KIEEK
Sbjct:    1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEK 37          
BLAST of CK939294 vs. ExPASy Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.967e-11
Identity = 30/37 (81.08%), Postives = 36/37 (97.30%), Query Frame = 3
Query:   60 MANAASGMAIDDDCKLKFLELKAKRTYRFIVFKIEEK 170
            MAN++SGMA+DD+CKLKF+ELKAKR +RFIVFKIEEK
Sbjct:    1 MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEK 37          
BLAST of CK939294 vs. ExPASy Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.355e-11
Identity = 30/37 (81.08%), Postives = 36/37 (97.30%), Query Frame = 3
Query:   60 MANAASGMAIDDDCKLKFLELKAKRTYRFIVFKIEEK 170
            MAN+ASGM ++D+CK+KFLELKAKRTYRFIVFKI+EK
Sbjct:    1 MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEK 37          
BLAST of CK939294 vs. ExPASy Swiss-Prot
Match: ADF3_ARATH (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana GN=ADF3 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.761e-11
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 3
Query:   60 MANAASGMAIDDDCKLKFLELKAKRTYRFIVFKIEE 167
            MANAASGMA+ DDCKLKF+ELK KRT+RFI++KIEE
Sbjct:    1 MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEE 36          
BLAST of CK939294 vs. ExPASy Swiss-Prot
Match: ADF2_ARATH (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.761e-11
Identity = 30/37 (81.08%), Postives = 35/37 (94.59%), Query Frame = 3
Query:   60 MANAASGMAIDDDCKLKFLELKAKRTYRFIVFKIEEK 170
            MANAASGMA+ DDCKLKF+ELKAKRT+R IV+KIE+K
Sbjct:    1 MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDK 37          
BLAST of CK939294 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.761e-11
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 3
Query:   60 MANAASGMAIDDDCKLKFLELKAKRTYRFIVFKIEEK 170
            MAN+ASGM + D+CKLKFLELKAKR YRFIVFKI+EK
Sbjct:    1 MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEK 37          
The following BLAST results are available for this feature:
BLAST of CK939294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
ADF7_ORYSJ1.362e-1286.49Actin-depolymerizing factor 7 OS=Oryza sativa subs... [more]
ADF2_PETHY1.362e-1289.19Actin-depolymerizing factor 2 OS=Petunia hybrida G... [more]
ADF4_ARATH8.828e-1286.49Actin-depolymerizing factor 4 OS=Arabidopsis thali... [more]
ADF1_PETHY8.828e-1286.49Actin-depolymerizing factor 1 OS=Petunia hybrida G... [more]
ADF1_ARATH8.828e-1286.49Actin-depolymerizing factor 1 OS=Arabidopsis thali... [more]
ADF_LILLO1.967e-1181.08Actin-depolymerizing factor OS=Lilium longiflorum ... [more]
ADF8_ARATH3.355e-1181.08Actin-depolymerizing factor 8 OS=Arabidopsis thali... [more]
ADF3_ARATH9.761e-1180.56Actin-depolymerizing factor 3 OS=Arabidopsis thali... [more]
ADF2_ARATH9.761e-1181.08Actin-depolymerizing factor 2 OS=Arabidopsis thali... [more]
ADF10_ARATH9.761e-1181.08Actin-depolymerizing factor 10 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004752_E09 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939294 ID=CK939294; Name=CK939294; organism=Citrus sinensis; type=EST; length=172bp
GGGGGTCACTATAGACTCCCTAGATTTTCTCACAATTTCCCCCATTTTCT
CTCCCGAAAATGGCAAATGCAGCATCTGGAATGGCAATCGACGATGACTG
CAAGCTGAAGTTTTTGGAATTGAAGGCAAAAAGGACTTACCGCTTCATAG
TTTTCAAGATTGAAGAGAAGCA
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