EY665997

Overview
NameEY665997
Unique NameEY665997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8028 contig Csv1_Contig8028:1..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665997 vs. ExPASy Swiss-Prot
Match: SERC3_PONAB (Serine incorporator 3 OS=Pongo abelii GN=SERINC3 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20
Identity = 67/211 (31.75%), Postives = 111/211 (52.61%), Query Frame = 1
Query:  214 RLAYCGLFGLSLIVSWIL-REVGTPLLEKFPW-------INTSD--GDTRTKEWYQIQAVLRVSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLPNVVIS-IYETISKFGAGLFLLVQVIILLDGVHTWNDAWVAKDEQ----KWYVALLAISVGCYLAAFTFSGILFIWF-NPSGHDCGLNVFFIVMTMIL 798
            RL Y  +  LS +VS+I+ R+     L+K P        I+ +D   D         +AV R+S    +FF + SL+M  +K   D R + H+G W  KI     ++V  F++P    S ++  +   GA LF+L+Q+++L+D  H+WN++WV + E+     WY ALL+ +   Y+ +    G+L+ ++  P G  C  N FFI + +IL
Sbjct:   39 RLIYAFILLLSTVVSYIMQRKEMETYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDPRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDG--CTENKFFISINLIL 247          
BLAST of EY665997 vs. ExPASy Swiss-Prot
Match: SERC3_HUMAN (Serine incorporator 3 OS=Homo sapiens GN=SERINC3 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.174e-20
Identity = 67/211 (31.75%), Postives = 111/211 (52.61%), Query Frame = 1
Query:  214 RLAYCGLFGLSLIVSWIL-REVGTPLLEKFPW-------INTSD--GDTRTKEWYQIQAVLRVSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLPNVVIS-IYETISKFGAGLFLLVQVIILLDGVHTWNDAWVAKDEQ----KWYVALLAISVGCYLAAFTFSGILFIWF-NPSGHDCGLNVFFIVMTMIL 798
            RL Y  +  LS +VS+I+ R+     L+K P        I+ +D   D         +AV R+S    +FF + SL+M  +K   D R + H+G W  KI     ++V  F++P    S ++  +   GA LF+L+Q+++L+D  H+WN++WV + E+     WY ALL+ +   Y+ +    G+L+ ++  P G  C  N FFI + +IL
Sbjct:   39 RLIYAFILLLSTVVSYIMQRKEMETYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDG--CTENKFFISINLIL 247          
BLAST of EY665997 vs. ExPASy Swiss-Prot
Match: SERC3_BOVIN (Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.840e-19
Identity = 67/210 (31.90%), Postives = 109/210 (51.90%), Query Frame = 1
Query:  214 RLAYCGLFGLSLIVSWILREVGTPL-LEKFPW-----INTSDGDTRTKEW---YQIQAVLRVSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLPNVVISI-YETISKFGAGLFLLVQVIILLDGVHTWNDAWVAKDEQK----WYVALLAISVGCYLAAFTFSGILFIWF-NPSGHDCGLNVFFIVMTMIL 798
            RL Y  +  L  IV  I+   G    L+K P      ++T   D   KE     + +AV R+S    +FF   SL+M+ +K   D R + H+G W  KI     ++V  F++P    +  +  I   GA  F+L+Q+++L+D  H+WN++WV + E+     WY ALL+++   Y+ +  F+G+L+ ++  P G  C  N FFI   +IL
Sbjct:   39 RLIYAFILFLGTIVCCIMFHEGMETQLKKIPGFCDEGLSTRITDIMDKECDVLVRYKAVYRISFALAVFFFAFSLLMLNVKTSKDPRAAIHNGFWFFKIAAIVGVMVGSFYIPGGHFNTAWFVIGMVGAAFFILIQLVLLVDFAHSWNESWVNRMEEGNPKCWYAALLSVTSLFYILSIIFAGLLYTYYTKPDG--CTENKFFISFNLIL 246          
BLAST of EY665997 vs. ExPASy Swiss-Prot
Match: SERIC_DICDI (Probable serine incorporator OS=Dictyostelium discoideum GN=serinc PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.558e-18
Identity = 61/206 (29.61%), Postives = 99/206 (48.06%), Query Frame = 1
Query:  214 RLAYCGLFGLSLIVSWILREVGTPLLEKFPWINTSD-------GDTRTKEWYQIQAVLRVSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLPNVVISIYETISKFGAGLFLLVQVIILLDGVHTWNDAWVAKDE------QKWYVALLAISVGCYLAAFTFSGILFIWFNPSGHDCGLNVFFIVMTM 792
            RL Y   F L  IV++IL          F W N  D       GD   K       V R++ G  L+  +L L+MI +K   D R     G W  KI++  +L+ + FF+PN    +Y  IS F A +F+ +Q+++L++  ++ N++ V K E      +KWYV L  +S G    A   + ++ +++      C +N F+IV  +
Sbjct:   23 RLVYVVFFLLVSIVAYILS------YWTFSWFNNLDVLKICSKGDNECKG---ALVVYRLTFGLALYHILLGLVMINVKSAGDSRAKLQDGYWPLKILLLGVLIFVSFFIPNSFFRVYTWISIFSAAIFIFIQLVLLIECAYSLNESCVRKIEDEGHSGKKWYVLLCVLSFGSIALAVAGTVLMLVFYGRG--SCSINQFYIVFNL 217          
BLAST of EY665997 vs. ExPASy Swiss-Prot
Match: SERC1_MOUSE (Serine incorporator 1 OS=Mus musculus GN=Serinc1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.249e-17
Identity = 48/153 (31.37%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  355 QAVLRVSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLP-NVVISIYETISKFGAGLFLLVQVIILLDGVHTWNDAWVAKDEQK----WYVALLAISVGCYLAAFTFSGILFIWFNPSGHDCGLNVFFIVMTMIL 798
            +AV R+  G  +F+ +LSL+MI +K  +D R + H+G W  K      +++  FF+P     +++  +   GA  F+L+Q+++L+D  H+WN++WV K E+     WY ALL+ +   YL +     + F+++      C  N  FI + M+L
Sbjct:   88 KAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFATAVAIIIGAFFIPEGTFTTVWFYVGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAVVLFFVYYTHPA-SCAENKAFISVNMLL 239          
BLAST of EY665997 vs. ExPASy Swiss-Prot
Match: SERC1_RAT (Serine incorporator 1 OS=Rattus norvegicus GN=Serinc1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17
Identity = 48/153 (31.37%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  355 QAVLRVSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLP-NVVISIYETISKFGAGLFLLVQVIILLDGVHTWNDAWVAKDEQK----WYVALLAISVGCYLAAFTFSGILFIWFNPSGHDCGLNVFFIVMTMIL 798
            +AV R+  G  +F+ +LSL+MI +K  +D R + H+G W  K      +++  FF+P     +++  +   GA  F+L+Q+++L+D  H+WN++WV K E+     WY ALL+ +   YL +     + F+++      C  N  FI + M+L
Sbjct:   88 KAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFATAVAIIIGAFFIPEGTFTTVWFYVGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIILFFVYYTHPA-SCSENKAFISVNMLL 239          
BLAST of EY665997 vs. ExPASy Swiss-Prot
Match: SERC1_PONAB (Serine incorporator 1 OS=Pongo abelii GN=SERINC1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17
Identity = 48/153 (31.37%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  355 QAVLRVSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLPN-VVISIYETISKFGAGLFLLVQVIILLDGVHTWNDAWVAKDEQK----WYVALLAISVGCYLAAFTFSGILFIWFNPSGHDCGLNVFFIVMTMIL 798
            +AV R+  G  +F+ +LSL+MI +K  +D R + H+G W  K      +++  FF+P     +++  +   GA  F+L+Q+++L+D  H+WN++WV K E+     WY ALL+ +   YL +     + F+++      C  N  FI + M+L
Sbjct:   88 KAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFYVGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYTHPA-SCSENKAFISVNMLL 239          
BLAST of EY665997 vs. ExPASy Swiss-Prot
Match: SERC1_HUMAN (Serine incorporator 1 OS=Homo sapiens GN=SERINC1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17
Identity = 48/153 (31.37%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  355 QAVLRVSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLPN-VVISIYETISKFGAGLFLLVQVIILLDGVHTWNDAWVAKDEQK----WYVALLAISVGCYLAAFTFSGILFIWFNPSGHDCGLNVFFIVMTMIL 798
            +AV R+  G  +F+ +LSL+MI +K  +D R + H+G W  K      +++  FF+P     +++  +   GA  F+L+Q+++L+D  H+WN++WV K E+     WY ALL+ +   YL +     + F+++      C  N  FI + M+L
Sbjct:   88 KAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFYVGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYTHPA-SCSENKAFISVNMLL 239          
BLAST of EY665997 vs. ExPASy Swiss-Prot
Match: SERC1_BOVIN (Serine incorporator 1 OS=Bos taurus GN=SERINC1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17
Identity = 48/153 (31.37%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  355 QAVLRVSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLPN-VVISIYETISKFGAGLFLLVQVIILLDGVHTWNDAWVAKDEQK----WYVALLAISVGCYLAAFTFSGILFIWFNPSGHDCGLNVFFIVMTMIL 798
            +AV R+  G  +F+ +LSL+MI +K  +D R + H+G W  K      +++  FF+P     +++  +   GA  F+L+Q+++L+D  H+WN++WV K E+     WY ALL+ +   YL +     + F+++      C  N  FI + M+L
Sbjct:   88 KAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAIHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFYVGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAVVLFFVYYTHPA-SCAENKAFISVNMLL 239          
BLAST of EY665997 vs. ExPASy Swiss-Prot
Match: SERIC_MONBE (Probable serine incorporator OS=Monosiga brevicollis GN=serinc PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.487e-16
Identity = 67/218 (30.73%), Postives = 105/218 (48.17%), Query Frame = 1
Query:  214 RLAYCGLFGLSLIVSWIL--REVGTPLLEKF--------------PWINTSDGDTRTKEWYQIQAVLRVSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLPN--VVISIYETISKFGAGLFLLVQVIILLDGVHTWNDAWVAKDEQ----KWYVALLAISVGCYLAAFTFSGILFIWFNPSGHDCGLNVFFIVMTMILA 801
            R+ Y  LF LS I +WI+  ++V   L++                P I T+   T    W ++  V+R+     LF   LSL  IG+    D R S H+G W  K+I+    +V  FF+ N   + + +  I   GA LF++VQ I+L+D  ++WND+WV K E+      + +   IS    L AF  +  + ++   +  DC L+ FFI   + LA
Sbjct:   45 RITYAILFFLSSIAAWIMLDKDVSKGLMKVCCYHSTLFRLVLFTQPAIKTT---TNVVPWGEL-GVMRIMFSVCLFHLFLSLCTIGVSSSKDPRSSLHNGMWFIKLILLVGAMVGSFFISNSFFIGASWSWIGLVGAVLFMIVQFILLVDFAYSWNDSWVGKLEEGSKCAGFGSYRLISATVMLMAFVITLTVLMFHFYTNGDCKLSNFFIGFNLALA 258          
The following BLAST results are available for this feature:
BLAST of EY665997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
SERC3_PONAB1.664e-2031.75Serine incorporator 3 OS=Pongo abelii GN=SERINC3 P... [more]
SERC3_HUMAN2.174e-2031.75Serine incorporator 3 OS=Homo sapiens GN=SERINC3 P... [more]
SERC3_BOVIN1.840e-1931.90Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=... [more]
SERIC_DICDI1.558e-1829.61Probable serine incorporator OS=Dictyostelium disc... [more]
SERC1_MOUSE2.249e-1731.37Serine incorporator 1 OS=Mus musculus GN=Serinc1 P... [more]
SERC1_RAT2.938e-1731.37Serine incorporator 1 OS=Rattus norvegicus GN=Seri... [more]
SERC1_PONAB2.938e-1731.37Serine incorporator 1 OS=Pongo abelii GN=SERINC1 P... [more]
SERC1_HUMAN2.938e-1731.37Serine incorporator 1 OS=Homo sapiens GN=SERINC1 P... [more]
SERC1_BOVIN2.938e-1731.37Serine incorporator 1 OS=Bos taurus GN=SERINC1 PE=... [more]
SERIC_MONBE2.487e-1630.73Probable serine incorporator OS=Monosiga brevicoll... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-011-E07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665997 ID=EY665997; Name=EY665997; organism=Citrus sinensis; type=EST; length=864bp
CCACGCGTCCGGATATCTTGACAGTCAGCAAGAGAGGTGATTTTACTTCC
TAGCCTTGACCAGCGTGTTCGGTGCTCTTGTTGTAGGCTGTGGCTAGGAG
TTTCTCGACAGACAGAGGAAAGAGAACCAATGTCTTGCTTAGCATCATGC
TGTGCGTCGCTGACTTGCGGCCTCTGCTCATCAGTGGCTTCTGGGAGCTC
CAAAAAATCAGCTAGACTCGCCTACTGTGGCCTCTTTGGTCTTTCACTCA
TCGTTTCTTGGATTCTCCGAGAAGTTGGTACTCCGCTGTTGGAAAAATTC
CCTTGGATAAACACTTCTGATGGTGATACACGTACAAAGGAATGGTATCA
AATACAAGCTGTTCTTCGCGTGAGCTTGGGGAATTTTCTATTTTTCGGTA
TACTTTCCCTTATAATGATTGGTATTAAGGACCAAAATGACAAACGTGAT
TCGTGGCACCATGGCGGATGGTGTGCAAAGATCATTATATGGGCTTTGCT
TGTTGTCCTCATGTTTTTCCTCCCAAATGTCGTCATCTCGATTTATGAAA
CTATATCAAAGTTTGGAGCGGGATTATTTTTATTGGTTCAAGTGATAATA
TTACTGGATGGTGTCCACACGTGGAATGATGCATGGGTTGCAAAAGATGA
ACAGAAGTGGTATGTTGCATTGCTTGCCATATCAGTTGGATGCTACCTTG
CAGCATTTACATTCTCAGGAATTCTGTTCATATGGTTCAATCCCTCCGGC
CATGACTGTGGCCTGAATGTATTTTTCATTGTCATGACCATGATCCTTGC
ATTCGNTTTTCGCTGGTATAGCCTTGAATCCCTCGGTAAACGGCAGTCTT
TTGCCTGCTTCAGT
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