CK938966
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938966 vs. ExPASy Swiss-Prot
Match: SCAM4_ARATH (Secretory carrier-associated membrane protein 4 OS=Arabidopsis thaliana GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 9.377e-80 Identity = 143/206 (69.42%), Postives = 160/206 (77.67%), Query Frame = 3 Query: 129 MNRHHDPNPFDEEE--VNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYWIHIXXC 740 MNRHHDPNPFDE+E VNPFS G +VP+ S P+ +GQ ATVDIPLDNMN+ +K+R+LA WEA+L AI K GV DD+NWPPFFPIIHHDI+KEIP+HAQ+LQYLAFASW GIVLCLVFNVIA +VCWIKGGGVKIFFLATIYAL+G P+SYVLWYRPLYRAMRTDSALKF WFF Y IHI C Sbjct: 1 MNRHHDPNPFDEDEEIVNPFSKGGG------RVPAA-SRPVEYGQSLDATVDIPLDNMNDSSQKQRKLADWEAELRKKEMDIKRREEAIAKFGVQIDDKNWPPFFPIIHHDIAKEIPVHAQKLQYLAFASWLGIVLCLVFNVIATMVCWIKGGGVKIFFLATIYALIGCPLSYVLWYRPLYRAMRTDSALKFGWFFFTYLIHIGFC 199
BLAST of CK938966 vs. ExPASy Swiss-Prot
Match: SCAM6_ORYSJ (Secretory carrier-associated membrane protein 6 OS=Oryza sativa subsp. japonica GN=SCAMP6 PE=2 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 4.366e-69 Identity = 129/207 (62.32%), Postives = 146/207 (70.53%), Query Frame = 3 Query: 138 HHDPNPFDEEEV--NPFSNGPAAPA---SRSQVPSVTSEPIGFGQKYG-ATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYWIHIXXC 740 HHDPNPFDE NPFSNG SR Q +EP GFG G ATVD+PLD M + K K REL+SWE DL A+ AGVP +D+NWPPFFPIIHHDI+ EIP + Q+LQYLAFASW GIVLCL +N IAVIVCWIK G K+FFLATIYALLG+P+SY++WYRPLYRAMRT+SA F WFFL Y IHI C Sbjct: 2 HHDPNPFDEGNADDNPFSNGGGGGGGGGSRQQYGFRPTEPAGFGAGRGDATVDVPLDTMGDSKSKARELSSWETDLKRREADIKRREEALRNAGVPMEDKNWPPFFPIIHHDIANEIPANLQKLQYLAFASWLGIVLCLSWNFIAVIVCWIKEGDSKLFFLATIYALLGIPLSYLIWYRPLYRAMRTNSAFSFGWFFLCYLIHIGFC 208
BLAST of CK938966 vs. ExPASy Swiss-Prot
Match: SCAM5_ORYSJ (Secretory carrier-associated membrane protein 5 OS=Oryza sativa subsp. japonica GN=SCAMP5 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.075e-67 Identity = 128/216 (59.26%), Postives = 149/216 (68.98%), Query Frame = 3 Query: 138 HHDPNPFDE-EEVNPFSNGPAAPASR--------------SQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYWIHIXXC 740 HHDPNPFDE + NPFSNG A R SQ S +G G K GATVDIPLDNM++ K K +EL WEADL A+ AGVP +++NWPPFFPIIHHDI+ EIP +AQ+LQYLAFASW GIVLCL +N IAVIVCWI+GG K+FFLATIY +LG+P+SY++WYRPLYRAMRTDSA F WFFL Y +HI C Sbjct: 2 HHDPNPFDEGADDNPFSNGGGGGARRGGGGGGGGGGGGGKSQF-SFGFGGLGGGSKGGATVDIPLDNMSDSKGKGKELLQWEADLKRREADIRRREEALKSAGVPMEEKNWPPFFPIIHHDIANEIPANAQKLQYLAFASWLGIVLCLFWNFIAVIVCWIRGGDSKLFFLATIYGMLGMPLSYLMWYRPLYRAMRTDSAFSFGWFFLCYMLHIAFC 216
BLAST of CK938966 vs. ExPASy Swiss-Prot
Match: SCAM2_ORYSJ (Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 7.213e-64 Identity = 117/204 (57.35%), Postives = 143/204 (70.10%), Query Frame = 3 Query: 129 MNRHHDPNPFDEEEVNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYWIHIXXC 740 M +D NPFDE++VNPF+ G PAS S++P + EP GF GATVDIPLD+ + KKKE+EL + EA+L A +AG+ +++NWPPFFPIIHHDIS EIPIH QR+QYLAF+S G+ CL +N+IA WIKG GV I+ LA IY + GVP +YVLWYRPLY AMRT+SALKF WFFLFY IHI C Sbjct: 1 MAGRYDRNPFDEDDVNPFAGGSVPPASNSRMPPLPHEP-GFYNDRGATVDIPLDSTKDMKKKEKELQAKEAELNKRESELRRREEAASRAGIVIEEKNWPPFFPIIHHDISNEIPIHLQRMQYLAFSSLLGLAACLFWNIIATTAAWIKGAGVMIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHILFC 203
BLAST of CK938966 vs. ExPASy Swiss-Prot
Match: SCAM_PEA (Secretory carrier-associated membrane protein OS=Pisum sativum GN=PSAM2 PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.169e-62 Identity = 113/205 (55.12%), Postives = 143/205 (69.76%), Query Frame = 3 Query: 129 MNRHHDPNPFDEEEVNPFSNG-PAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYWIHIXXC 740 M +DPNPFDEE+VNPFSN AA A+ S+ + + + +G TVDIPLD + KKKER+L + EA+L AI +AG+ +++NWPPFFPIIHHDI+ EIPIH + LQY+AF S G+VLCL +NV++V WIKG GVKI+FLA IY + GVP +Y LWYRPLYRA RTDSA+KF WFF+FY +HI C Sbjct: 1 MAGRYDPNPFDEEQVNPFSNPRSAASATNSRPAPLNPDRADYNYGFGPTVDIPLDTSTDGKKKERDLQAKEAELRKREQEVRRKEEAIARAGIVIEEKNWPPFFPIIHHDITNEIPIHLRTLQYVAFFSLLGLVLCLTWNVVSVTAAWIKGEGVKIWFLAIIYFIAGVPGAYALWYRPLYRAFRTDSAIKFGWFFMFYLLHIGFC 205
BLAST of CK938966 vs. ExPASy Swiss-Prot
Match: SCAM3_ARATH (Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana GN=SCAMP3 PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.464e-61 Identity = 116/208 (55.77%), Postives = 143/208 (68.75%), Query Frame = 3 Query: 129 MNRHHDPNPF-DEEEVNPFSNGPAAP-ASRSQVPSVTSEPIGFGQKYGATVDIPLDNMN--EPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYWIHIXXC 740 M +DPNPF +EEEVNPF+N P AS S++ + EP+GF YG TVDIPLD + KKKE+EL + EA+L A +AG+ + +NWPPFFP+IHHDI+ EIP+H QRLQY+ FA++ G+VLCL +N+IAV WIKG GV I+ LA IY + GVP YVLWYRPLYRA RTDSAL F WFFLFY +HI C Sbjct: 1 MANRYDPNPFAEEEEVNPFANARGVPPASNSRLSPLPPEPVGFD--YGRTVDIPLDRAGTQDLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGEGVTIWLLALIYFIAGVPGGYVLWYRPLYRAFRTDSALSFGWFFLFYMLHIAFC 206
BLAST of CK938966 vs. ExPASy Swiss-Prot
Match: SCAM3_ORYSJ (Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.192e-58 Identity = 106/200 (53.00%), Postives = 138/200 (69.00%), Query Frame = 3 Query: 141 HDPNPFDEEEVNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYWIHIXXC 740 H N F++++VNPF+ G PA+ S++P ++ EP F VDIPLD+ + KKKE+EL + EA+L A +AG+ +D+NWPPFFP+IHH+IS EIPIH QR+QYLAF+S+ G+ CL +N+IA W+KG GV I+ LA IY + GVP +YVLWYRPLY AMRT+SALKF WFFLFY IHI C Sbjct: 5 HGRNGFEDDDVNPFAGGSVPPANNSRLPPLSHEPADF-----YNVDIPLDSSKDLKKKEKELQAMEAELNKRERELKRKEEAAAQAGIVIEDKNWPPFFPLIHHNISNEIPIHLQRMQYLAFSSFLGLAACLFWNIIATTTAWVKGEGVIIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHIIFC 199
BLAST of CK938966 vs. ExPASy Swiss-Prot
Match: SCAM1_ARATH (Secretory carrier-associated membrane protein 1 OS=Arabidopsis thaliana GN=SCAMP1 PE=1 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.540e-57 Identity = 104/200 (52.00%), Postives = 137/200 (68.50%), Query Frame = 3 Query: 141 HDPNPFDEEEVNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYWIHIXXC 740 + + FD+ E+NPF+N + PA+ S++ + EP GAT+DIPLD+ + K KE+EL EA+L AI +AG+ +++NWPPFFP+IHHDIS EIPIH QR+QY+AF S G+V+CL++N++AV WIKG G I+FLA IY + GVP +YV+WYRPLYRAMRTDSALKF WFF Y HI C Sbjct: 4 YQSHSFDDGEINPFANPTSVPAATSKLSPLPPEPYD----RGATMDIPLDSGKDLKAKEKELREKEAELKRREQEIKRKEDAIAQAGIVIEEKNWPPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGAYVMWYRPLYRAMRTDSALKFGWFFFTYLFHIAFC 199
BLAST of CK938966 vs. ExPASy Swiss-Prot
Match: SCAM5_ARATH (Secretory carrier-associated membrane protein 5 OS=Arabidopsis thaliana GN=SCAMP5 PE=2 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 3.588e-55 Identity = 111/210 (52.86%), Postives = 138/210 (65.71%), Query Frame = 3 Query: 129 MNRHHDPNPFDEE-EVNPFSNGPAAPA-SRSQVPSVTSEPIGFGQKYGATVDIPLDN----MNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYWIHIXXC 740 M +D N FDE+ EVNPF+N + PA S S++ + EP GFG YG TVDIPLD + KKKE+EL + EADL A +AG+ + +NWP FFP+IHHDI+ EI + QRLQY+AFA++ G+VL L +N+IAV WIKG GV I+ LA IY + GVP YVLWYRPLYRA R+DSA F WFFLFY +HI C Sbjct: 1 MGGRYDRNTFDEQDEVNPFANPGSVPAASNSRLSPLPPEPAGFG--YGRTVDIPLDRPGSGAQDLKKKEKELQAKEADLRRREQDLKRKQDAAARAGIVIEAKNWPTFFPLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIKGEGVTIWLLAVIYFISGVPGGYVLWYRPLYRAFRSDSAFNFGWFFLFYMLHILFC 208
BLAST of CK938966 vs. ExPASy Swiss-Prot
Match: SCAM2_ARATH (Secretory carrier-associated membrane protein 2 OS=Arabidopsis thaliana GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.781e-54 Identity = 106/201 (52.74%), Postives = 134/201 (66.67%), Query Frame = 3 Query: 141 HDPNPFDEEEVNPFSNGPAAP-ASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYWIHIXXC 740 HDPNPF +EE+NPF+N + P AS S + + EP GATVDIPLD+ N+ + KE EL + E +L AI + GV +++NWP FFP+IHHDI EIPIH Q++QY+AF + G+V CL++N++AV V WIKG G I+ L+ IY L GVP +YVLWYRPLYRA RTDSALKF FF FY HI C Sbjct: 4 HDPNPFADEEINPFANHTSVPPASNSYLKPLPPEPYD----RGATVDIPLDSGNDLRAKEMELQAKENELKRKEQELKRREDAIARTGVVIEEKNWPEFFPLIHHDIPNEIPIHLQKIQYVAFTTLLGLVGCLLWNIVAVTVAWIKGEGPTIWLLSIIYFLAGVPGAYVLWYRPLYRATRTDSALKFGAFFFFYVFHIAFC 200 The following BLAST results are available for this feature:
BLAST of CK938966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938966 ID=CK938966; Name=CK938966; organism=Citrus sinensis; type=EST; length=741bpback to top |