CK938954

Overview
NameCK938954
Unique NameCK938954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3674 contig Csv1_Contig3674:449..1168. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.066e-44
Identity = 88/227 (38.77%), Postives = 134/227 (59.03%), Query Frame = 2
Query:   41 LASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADD-EQVKLYGMGKFDFRTS 718
            +A C YE N+ WG K+GF Y SLVEDYFT F  LHC+GWRS++ +P +  F G S   L D + Q  RWS GL++VA S+Y PL YG   +SLL S+ Y     +P   C+PL  +  +P + ++HG+ ++P+       +++ +FL   ++ L + L  GG+ + W N+QR+WM+R ++   +G     +  L L+   ++ T+K  DD EQ+K Y    FDF  S
Sbjct:  412 VAGCNYECNTNWGSKIGFRYGSLVEDYFTGF-MLHCEGWRSIFCSPTKAAFYGDSPKCLTDVIGQQIRWSVGLLEVAFSRYNPLTYGIKPLSLLMSLGYCHYAFWPFW-CIPLVVYGILPQVALIHGVSVFPKASDPWFWLYIILFLGGYAQDLSDFLLEGGTYRKWWNDQRMWMVRGLSSFFFGFTEFTLKTLNLSTQGYNVTSKSNDDNEQMKRYEQEIFDFGPS 636          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.221e-41
Identity = 83/231 (35.93%), Postives = 135/231 (58.44%), Query Frame = 2
Query:   26 QESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTS 718
            +++K LA+C YE  ++WG ++G  Y   VED  T    +HC+GW SVY+ P+R  F+G +   L  +++Q  RWS G   + +SK+   ++G  ++SL   M Y   G++   N LP   +  +P L ++ G PL+PE++S  +  F++VF       LYE L +G ++K W N QR+WM++ +T  LYG ++ I   LGL++ SF  T KV+D ++ K Y     +F +S
Sbjct:  416 EKAKSLATCTYELRTQWGNEIGVKYGCPVEDVITGLA-IHCRGWESVYMEPQRAAFVGVAPATLAQTILQHKRWSEGNFTIFLSKHNTFLFGHGKISLQLQMGYCIYGLWAA-NSLPTIYYVMIPALGLVKGTPLFPEIMSPWATPFIYVFCVKTLYSLYEALLSGDTLKGWWNGQRMWMVKRITSYLYGFIDTIRKLLGLSKMSFEITAKVSDGDEAKRYEQEILEFGSS 644          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.125e-41
Identity = 88/218 (40.37%), Postives = 134/218 (61.47%), Query Frame = 2
Query:   35 KFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLY 688
            K LASC YE N++WG+++G  Y   VED  T    + C+GW+S YLNPE+  FLG + TNL+  LVQ  RWS G  Q+ +SKY P+ YG  ++SL   + Y    ++   + LP+  ++ +  LC+  GIPL+P+V SS    F +V ++A +  L E L  GG+ + W NEQR+W+ R  +  L+G ++ I   LG++E++F  T KVA++E  + Y
Sbjct:  416 KALASCTYEENTQWGKEMGVKYGCPVEDVITGLT-IQCRGWKSAYLNPEKQAFLGVAPTNLHQMLVQQRRWSEGDFQIMLSKYSPVWYGKGKISLGLILGYCCYCLWAP-SSLPVLIYSVLTSLCLFKGIPLFPKVSSSWFIPFGYVTVAATAYSLAEFLWCGGTFRGWWNEQRMWLYRRTSSFLFGFMDTIKKLLGVSESAFVITAKVAEEEAAERY 631          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.061e-40
Identity = 85/222 (38.29%), Postives = 142/222 (63.96%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG--PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIK-IWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADD 670
            STL++E+  + SCGYE  ++WG+++G++Y S+ ED  T FK +HC+GWRS+Y  P RP F G++  NL+D L Q  RW+ G V++ +S++CPL YG    R+ LL+ +AY +  ++P  + LPL  + T+P +C+L G  + P + + +S +F+ +F+S +   + E+  +G SI+ +WRNEQ  W+I  V+  L+      +  L   + +F+ T+K ADD
Sbjct:  649 STLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFK-MHCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGCSGGRLKLLQRLAYINTIVYPFTS-LPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQ-FWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADD 867          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.032e-40
Identity = 85/227 (37.44%), Postives = 132/227 (58.15%), Query Frame = 2
Query:   41 LASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKV-ADDEQVKLYGMGKFDFRTS 718
            +A C YE N+ WG K+GF Y SLVEDY+T F  LHC+GWRSV+ NP++  F G S   L D + Q  RW+ GL +++ SKY P+ YG   + LL  + Y +    P  + +PL  +  +P L ++ G+ ++P+       +++ +F  A ++ L + L  GG+ + W N+QR+ MI+ ++   +G +  I+  L L+   F+ T+K   DDEQ K Y    FDF TS
Sbjct:  422 VAGCIYEYNTNWGSKIGFRYGSLVEDYYTGF-MLHCEGWRSVFCNPKKAAFYGDSPKCLVDLVGQQIRWAVGLFEMSFSKYSPITYGIKSLDLLMGLGYCNSPFKPFWS-IPLTVYGLLPQLALISGVSVFPKASDPWFWLYIILFFGAYAQDLSDFLLEGGTYRKWWNDQRMLMIKGLSSFFFGFIEFILKTLNLSTPKFNVTSKANDDDEQRKRYEQEIFDFGTS 646          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.532e-39
Identity = 77/231 (33.33%), Postives = 133/231 (57.58%), Query Frame = 2
Query:   26 QESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTS 718
            +++  L +C YE  ++WG  +G  Y    ED  T    +HC+GW S ++NP+R  FLG + + L  +++Q  RWS G + + +SKYC  ++G  ++ L   M Y   G++   N LP   +  +P L ++ G PL+P+++S  +  F++VF       LYE L +G ++K W N QR+WM++++T  LYG ++ I   +G+++ SF  T KV+  ++ K Y     +F +S
Sbjct:  421 EKATSLVTCTYEHRTQWGNDIGVKYGFPAEDIITGLA-IHCRGWESAFINPKRAAFLGLAPSTLAQNILQHKRWSEGNLTIFLSKYCSFLFGHGKIKLQLQMGYCICGLWAA-NSLPTLYYVVIPSLGLVKGTPLFPQIMSPWATPFIYVFCVKTLYGLYEALLSGDTLKGWWNGQRMWMVKSITSYLYGFIDTIRKCVGMSKMSFEVTAKVSGHDEAKRYEQEILEFGSS 649          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.614e-39
Identity = 88/230 (38.26%), Postives = 133/230 (57.83%), Query Frame = 2
Query:   41 LASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSP---IFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADD-EQVKLYGMGKFDFRTS 718
            +A C YE N+ WG K+GF Y SLVEDY+T ++ LHC+GWRSV+  P+R  F G S  +L D + Q  RW+ GL++VAIS+Y P+ YG   M L+  + Y     +   + LPL  +  +P L +L+   ++P+   SS P   +++ +FL A  + L + +  GG+   W N+QR+W IR  +  L+G +   +  L L+   F+ T+K  DD EQ K Y    F+F  S
Sbjct:  441 VAGCIYELNTNWGSKIGFRYGSLVEDYYTGYR-LHCEGWRSVFCRPKRAAFCGDSPKSLIDVVSQQKRWAIGLLEVAISRYSPITYGVKSMGLVTGVGYCQYACWAFWS-LPLIVYGFLPQLALLYQSSVFPK---SSDPWFWLYIVLFLGAYGQDLLDFVLEGGTYGGWWNDQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSKANDDEEQSKRYEKEIFEFGPS 665          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.932e-39
Identity = 86/235 (36.60%), Postives = 132/235 (56.17%), Query Frame = 2
Query:    5 DSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDF 709
            + ++ L +  + L +C YE N+ WG + G  Y   +ED  T   Q+ C+GWRSVY NP+R  FLG + T+L   LV   RW+ G +Q+++S+Y P + G  ++ L   M Y+  G F  +N  P   + T+P LC L+GI L+PE  S     F +V ++A S  L E L  G S   W N QR+W+IR +T  L  +++     LG++E+ F+ T KV D + ++ Y  G  +F
Sbjct:  421 EDANELEEMGRSLVTCTYEHNTIWGIEKGVRYGCPLEDVTTGL-QIQCRGWRSVYYNPKRKGFLGMTPTSLGQILVLYKRWTEGFLQISLSRYSPFLLGHGKIKLGLQMGYSVCG-FWAVNSFPTLYYVTIPSLCFLNGISLFPEKTSPWFIPFAYVMVAAYSCSLAESLQCGDSAVEWWNAQRMWLIRRITSYLLATIDTFRRILGISESGFNLTVKVTDLQALERYKKGMMEF 653          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.297e-38
Identity = 81/224 (36.16%), Postives = 143/224 (63.84%), Query Frame = 2
Query:    8 SSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIK-IWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673
            ++S+L++E+  + SCGYE  ++WG+++G++Y S+ ED  T F+ +HC+GW+SVY  P+RP F G++  NL+D L Q  RW+ G V++  S++CPL Y    ++ +LE +AY +  ++P  + +PL  + T+P +C+L G  + P + + +S  F+ +FLS ++  + E+  +G SI  +WRNEQ  W+I  V+  L+     ++  L   + +F+ T+K A DE
Sbjct:  712 NTSSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFR-MHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFTS-IPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQ-FWVIGGVSAHLFAVFQGLLKVLFGVDTNFTVTSKGASDE 932          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.694e-38
Identity = 78/220 (35.45%), Postives = 133/220 (60.45%), Query Frame = 2
Query:   17 TLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673
            +LL+E+  + SCGYE  S WG ++G++Y S+ ED  T FK +H +GWRS+Y  P+RP F G++  NL+D L Q  RW+ G V++  S++CP+ YG   R+  LE  AY +  ++PL + +PL  +  +P +C+L G  + PE+ + +S  F+ +FLS  +  + E+  +G  I  W   ++ W+I  ++  L+     ++  L   + SF+ T+K +D+E
Sbjct:  740 SLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFK-MHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTS-IPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEE 957          
The following BLAST results are available for this feature:
BLAST of CK938954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLG2_ARATH2.066e-4438.77Cellulose synthase-like protein G2 OS=Arabidopsis ... [more]
CSLE6_ORYSJ6.221e-4135.93Cellulose synthase-like protein E6 OS=Oryza sativa... [more]
CSLE1_ARATH8.125e-4140.37Cellulose synthase-like protein E1 OS=Arabidopsis ... [more]
CESA8_ARATH1.061e-4038.29Cellulose synthase A catalytic subunit 8 [UDP-form... [more]
CSLG1_ARATH4.032e-4037.44Cellulose synthase-like protein G1 OS=Arabidopsis ... [more]
CSLE1_ORYSJ1.532e-3933.33Cellulose synthase-like protein E1 OS=Oryza sativa... [more]
CSLG3_ARATH2.614e-3938.26Cellulose synthase-like protein G3 OS=Arabidopsis ... [more]
CSLE2_ORYSJ9.932e-3936.60Cellulose synthase-like protein E2 OS=Oryza sativa... [more]
CESA4_ARATH1.297e-3836.16Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA2_ORYSJ1.694e-3835.45Probable cellulose synthase A catalytic subunit 2 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004436_B05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938954 ID=CK938954; Name=CK938954; organism=Citrus sinensis; type=EST; length=720bp
TAATGATTCATCAAGCACTTTGCTACAAGAGAGCAAATTTTTGGCCTCAT
GTGGCTATGAAAGTAACTCAAAATGGGGTGAAAAGGTTGGTTTTATGTAT
CATTCTCTTGTTGAAGATTACTTCACGNGATTTAAACAACTACACTGCAA
AGGATGGAGATCGGTGTATCTTAACCCGGAAAGGCCGCAATTTTTGGGCA
CTTCTACAACAAACTTAAATGACTCGTTGGTTCAAGGCACGAGATGGAGT
TCGGGATTGGTTCAAGTAGCAATCTCAAAGTATTGCCCTCTGATATATGG
ACCACCGAGGATGTCTTTGCTTGAAAGCATGGCCTATGCTGACCTTGGAA
TGTTCCCTCTTCTTAATTGCTTGCCTCTGTGGTGCTTTGCCACTGTCCCT
CATCTCTGCGTATTGCATGGCATCCCATTGTACCCTGAGGTTTTAAGTTC
ATCTTCCCCCATATTCGTATTCGTTTTCCTATCGGCGCTTTCTAAACATC
TATACGAGGTTCTTTCAACTGGTGGATCAATCAAGATATGGAGAAATGAA
CAGAGAATATGGATGATAAGGGCAGTCACATGCCAACTTTATGGAAGCTT
AAATGCCATTATGCACAAGCTTGGCTTAGCTGAAGCCAGTTTCTCGGCCA
CAAATAAAGTCGCGGATGATGAACAAGTGAAGCTCTACGGAATGGGCAAG
TTCGATTTCCGAACATCAAA
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