CK938916
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_PRUAV (60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 4.045e-42 Identity = 89/112 (79.46%), Postives = 90/112 (80.36%), Query Frame = 3 Query: 36 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY---------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 MVLKTELC+FSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY PYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL Sbjct: 1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 112 HSP 2 Score: 23.8682 bits (50), Expect = 4.045e-42 Identity = 7/18 (38.89%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 452 GCRPEGPQARRWWWKAVN 505 G +P+GP+ W W+A++ Sbjct: 149 GAQPKGPKLGGWRWQALS 166
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_CICAR (60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.897e-39 Identity = 84/112 (75.00%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 36 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY---------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 MVLKTELC+FSGAKIYPG+GIRFIR DSQVFLF NSKCKRYFHNRLKPSKLTWTAM+ PYSRSIVGATLEVIQK+RTEKPEVRDAAREAAL Sbjct: 1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAAL 112
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_HORVU (60S ribosomal protein L24 OS=Hordeum vulgare GN=RPL24 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.520e-39 Identity = 84/112 (75.00%), Postives = 87/112 (77.68%), Query Frame = 3 Query: 36 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY---------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 MVLKTELC+FSG KIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKP+KL WTAMY PYSRSIVGATLEVIQK+R EKPEVRDAAREAAL Sbjct: 1 MVLKTELCRFSGQKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPAKLCWTAMYRKQHKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAAL 112
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL242_ARATH (60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 3.578e-38 Identity = 82/112 (73.21%), Postives = 86/112 (76.79%), Query Frame = 3 Query: 36 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY---------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 MVLKTELC+FSG KIYPG+GIRFIRSDSQVFLF NSKCKRYFHN+LKPSKL WTAMY PYSRSIVGATLEVIQK+R EKPEVRDAAREAAL Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAAL 112
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL241_ARATH (60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A PE=1 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 4.673e-38 Identity = 82/112 (73.21%), Postives = 86/112 (76.79%), Query Frame = 3 Query: 36 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY---------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 MVLKTELC+FSG KIYPG+GIRFIRSDSQVFLF NSKCKRYFHN+LKPSKL WTAMY PYSRSIVGATLEVIQK+R EKPEVRDAAREAAL Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAAL 112
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24B_SCHPO (60S ribosomal protein L24-B OS=Schizosaccharomyces pombe GN=rpl24b PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.481e-17 Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 +K E+C FSG+K+YPG G F+R D++VF F N K + F R P +L+WT +Y + R IVGA L+VI+++R ++PEVR AAR AAL Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVKHQRGIVGANLDVIKEKRNQRPEVRAAARAAAL 109
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24A_SCHPO (60S ribosomal protein L24-A OS=Schizosaccharomyces pombe GN=rpl24a PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.481e-17 Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 +K E+C FSG+K+YPG G F+R D++VF F N K + F R P +L+WT +Y + R IVGA L+VI+++R ++PEVR AAR AAL Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVKHQRGIVGANLDVIKEKRNQRPEVRAAARAAAL 109
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_DEBHA (60S ribosomal protein L24 OS=Debaryomyces hansenii GN=RPL24 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16 Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 +K EL FSG KIYPG+G F+R DS++F F +SK FH R P +++WT +Y R+IVGA+LE+I++RR++KP R AAR+ L Sbjct: 1 MKVELDSFSGTKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRISWTVLYRRQHKKGISEESAKRRTRKTVKNQRAIVGASLELIKERRSQKPSDRKAARDVKL 109
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_KLULA (60S ribosomal protein L24 OS=Kluyveromyces lactis GN=RPL24 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 43/106 (40.57%), Postives = 61/106 (57.55%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAARE 335 +K E+ FSGAKIYPG+G F+R DS++F F +SK FH R P ++ WT +Y R++VGA+LE+I++RR+ KPEVR A R+ Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVARKRTRKSVKAQRAVVGASLELIKERRSLKPEVRKAQRD 106
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_ASHGO (60S ribosomal protein L24 OS=Ashbya gossypii GN=RPL24 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 43/106 (40.57%), Postives = 61/106 (57.55%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAARE 335 +K E+ FSGAKIYPG+G F+R DS+VF F +SK FH R P ++ WT +Y R++VGA+LE+I++RR+ KPE+R A R+ Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKVFRFHSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVAKKRSRKTVKAQRAVVGASLELIKERRSLKPEIRKAKRD 106 The following BLAST results are available for this feature:
BLAST of CK938916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938916 ID=CK938916; Name=CK938916; organism=Citrus sinensis; type=EST; length=695bpback to top |