CK938791

Overview
NameCK938791
Unique NameCK938791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13608 contig Csv1_Contig13608:607..1387. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 3.657e-69
Identity = 135/186 (72.58%), Postives = 143/186 (76.88%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 563
            SPL HFGLKQS                   AKAMGHHVTVISSSDKKR EAMEHLGAD+YLVSSD   MQ+AAD LDYIIDTVP  HPLEPY             GVIN P+QF+TPMVMLGRK+ITGSFIGSMKET+EMLEFC+EKGV SMIEVIKMDY+N AFERLEKNDVRYRFVVDVAGSKL
Sbjct:  170 SPLKHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEAMEHLGADEYLVSSDVESMQKAADQLDYIIDTVPVVHPLEPYLSLLKLDGKLILMGVINAPLQFVTPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGVASMIEVIKMDYINTAFERLEKNDVRYRFVVDVAGSKL 355          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.064e-68
Identity = 134/188 (71.28%), Postives = 148/188 (78.72%), Query Frame = 3
Query:    6 SPLSHFGLKQ-SXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SPL+HFGLK+ S                   AKAMGHHVTVISSSDKK+ EA++HLGAD YLVSSDAT+MQEAADSLDYIIDTVP  HPLEPY             GVINTP+QF++PMVMLGRKAITGSFIGSMKET+EML+FC EKG+TS IEV+KMDY+N AFERLEKNDVRYRFVVDVAGSKLD
Sbjct:  170 SPLTHFGLKEISGLRGGILGLGGVGHMGVKLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVSSDATQMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFISPMVMLGRKAITGSFIGSMKETEEMLDFCNEKGITSTIEVVKMDYINTAFERLEKNDVRYRFVVDVAGSKLD 357          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.280e-68
Identity = 129/187 (68.98%), Postives = 144/187 (77.01%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SPL+HFG KQS                   AKAMGHHVTVISSS+KKR EA+EHLGAD YLVSSD  +MQEA+DSLDYIIDTVP  HPLEPY             GVINTP+QF++PMVMLGRK+ITGSFIGSMKET+EML+FC+EKGVTS IE++KMDY+N A ERLEKNDVRYRFVVDV GSKLD
Sbjct:  170 SPLNHFGFKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEASDSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVRYRFVVDVIGSKLD 356          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 6.896e-68
Identity = 130/186 (69.89%), Postives = 144/186 (77.42%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 563
            SPL+HFGLKQS                   AKAMGHHVTVISSSDKKR EA++HLGAD YLVSSDA RMQEAADSLDYIIDTVP  HPLEPY             GV+NTP+QF++PMVMLGRK+ITGSFIGSMKE  EMLEFC+EK ++S IE++KMDY+N AFERLEKNDVRYRFVVDVAGSKL
Sbjct:  170 SPLNHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVSSDAARMQEAADSLDYIIDTVPVFHPLEPYLSLLKIDGKLILMGVVNTPLQFVSPMVMLGRKSITGSFIGSMKELAEMLEFCKEKDLSSTIEIVKMDYINTAFERLEKNDVRYRFVVDVAGSKL 355          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.838e-67
Identity = 131/187 (70.05%), Postives = 141/187 (75.40%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SPL  FGLKQS                   AKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+EA DSLDYI DT+P  HPLEPY            TGVIN P+QF++PMVMLGRK+ITGSFIGSMKET+EMLEFC+EKG+TS IEVIKMDYVN A ERLEKNDVRYRFVVDVAGSKLD
Sbjct:  169 SPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVAGSKLD 355          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.699e-66
Identity = 130/187 (69.52%), Postives = 140/187 (74.87%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SPL  FGLKQS                   AKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+EA DSLDYI DT+P  HPLEPY            TGVIN P+QF++PMVMLGRK+ITGSFIGSMKET+EMLEFC+EKG+TS IEVIKMDYVN A ERLEKNDVRYRFVVDV GSKLD
Sbjct:  170 SPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGSKLD 356          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.699e-66
Identity = 130/187 (69.52%), Postives = 140/187 (74.87%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SPL  FGLKQS                   AKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+EA DSLDYI DT+P  HPLEPY            TGVIN P+QF++PMVMLGRK+ITGSFIGSMKET+EMLEFC+EKG+TS IEVIKMDYVN A ERLEKNDVRYRFVVDV GSKLD
Sbjct:  170 SPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGSKLD 356          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.942e-66
Identity = 127/187 (67.91%), Postives = 141/187 (75.40%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SP +HFG  QS                   AKAMGHHVTVISSS+KKR EA+EHLGAD YLVSSD  +MQEAADSLDYIIDTVP  HPLE Y             GVINTP+QF++PMVMLGRK+ITGSFIGSMKET+EML+FC+EKGVTS IE++KMDY+N A ERLEKNDV YRFVVDVAGSKLD
Sbjct:  170 SPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEAADSLDYIIDTVPVGHPLELYLSLLKIDGKLILIGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVSYRFVVDVAGSKLD 356          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.203e-65
Identity = 126/187 (67.38%), Postives = 141/187 (75.40%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SPLSHFGLK                     AKA+GHHVTVISSSDKK+ EA+E LGAD YLVSSD   MQEAADSLDYIIDTVP  HPLEPY             GVINTP+QF+TPMVMLGRK+ITGSF+GS+KET+EMLEF +EKG+TSMIE++ MDY+NKAFERLEKNDVRYRFVVDV GSK +
Sbjct:  171 SPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQEAADSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFVTPMVMLGRKSITGSFVGSVKETEEMLEFWKEKGLTSMIEIVTMDYINKAFERLEKNDVRYRFVVDVKGSKFE 357          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.758e-63
Identity = 122/187 (65.24%), Postives = 139/187 (74.33%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SPLSHFGLKQ                    AKAMGHHVTVISSS+KKR EA++ LGAD Y++ SD  +M E ADSLDY+IDTVP +H LEPY             GVIN P+QFLTP++MLGRK ITGSFIGSMKET+EMLEFC+EKG++S+IEV+KMDYVN AFERLEKNDVRYRFVVDV GS LD
Sbjct:  170 SPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSNLD 356          
The following BLAST results are available for this feature:
BLAST of CK938791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CADH_POPDE3.657e-6972.58Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH1_ARACO1.064e-6871.28Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH1_TOBAC5.280e-6868.98Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH1_OCIBA6.896e-6869.89Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH_EUCBO5.838e-6770.05Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH_EUCGL1.699e-6669.52Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU1.699e-6669.52Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH2_TOBAC4.942e-6667.91Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH_MEDSA3.203e-6567.38Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH5_ARATH1.758e-6365.24Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004438_D03 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938791 ID=CK938791; Name=CK938791; organism=Citrus sinensis; type=EST; length=782bp
GGGTCAGTCCCCTGAGCCACTTTGGATTGAAGCAGAGCGGGCTGAGAGGA
GGAATCTTGGGGCTCGGAGGAGTAGGTCACATGGGGGTTTTGATAGCTAA
GGCGATGGGACACCATGTTACTGTGATTAGCTCTTCTGATAAGAAAAGAG
TGGAAGCTATGGAGCATCTTGGTGCCGATCAGTACCTTGTCAGCTCCGAC
GCAACTCGTATGCAAGAAGCCGCTGACTCACTTGATTATATCATTGATAC
CGTGCCCGCAAATCACCCTCTGGAGCCTTACCTTTCGCTGCTGAAGCTTG
ATGGAAAGTTGATCTTGACGGGTGTCATTAACACTCCCATGCAGTTTCTT
ACCCCTATGGTTATGCTTGGGAGAAAGGCAATCACGGGGAGCTTCATTGG
GAGCATGAAGGAGACAAAGGAAATGCTTGAATTCTGCCGAGAGAAGGGAG
TCACCTCCATGATTGAAGTGATCAAGATGGATTACGTTAACAAAGCATTC
GAGAGACTCGAAAAGAACGACGTTAGGTACAGATTCGTCGTGGACGTTGC
CGGAAGCAAACTCGATCCGTAGAGAAATTCAATTTTGGCATGATGCTCGT
TTTGTTTTTTGAGTGCCTTGTTTGGTTTTTATGCTTTCGTCGTTGGCCTA
ACCATATGTGGCTTCCGTGTTTACAATTTCTCCTAATAAGTTAAAAAAAA
AAAACAAGCTGAGGTGTTTACTGACAGTGTGTTAATTTAATCAGTATTTT
TTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top