CK938789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938789 vs. ExPASy Swiss-Prot
Match: U497D_RICCO (UPF0497 membrane protein 13 OS=Ricinus communis GN=RCOM_1446020 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.796e-29 Identity = 42/74 (56.76%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 364 LLIRMEVTMVLLISGCAAASAIGYVGKYGELKMGWGAVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKL 585 L + V MV+++SGC+AA+AIGYVG+YGE ++ W AVC F KFCN++ +S+VL+YLA CY+ LT L+AHKL Sbjct: 115 LFLHDMVMMVMMVSGCSAATAIGYVGRYGEKEITWTAVCDFVGKFCNQALVSIVLAYLALFCYVALTTLAAHKL 188 HSP 2 Score: 51.9878 bits (123), Expect = 6.796e-29 Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 218 WPWSNKR-FFVAQITLRILATAFSLAAVSLMITSTQTVLVFLVQMKVTYSSSSAWR 382 +P KR FF+AQ+ RILA AF++A++S M+TS Q V+VF + YS SSA+R Sbjct: 23 YPSQPKRIFFMAQVIFRILAIAFAVASISAMVTSDQNVIVFGMDTAARYSYSSAFR 78
BLAST of CK938789 vs. ExPASy Swiss-Prot
Match: U4971_POPTR (UPF0497 membrane protein 1 OS=Populus trichocarpa GN=POPTRDRAFT_824792 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.527e-15 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 1 Query: 355 YLQLLIRMEVTMVLLISGCAAASAIGYVGKYGELKMGWGAVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHK 582 Y L + M L++ GCAAA+ +G++GK+G GW +C KFCNR+ S+ +SYL +C LTI SA K Sbjct: 100 YFFLFLHDLAMMSLVVGGCAAATTVGFLGKHGNSHTGWMQICDNFGKFCNRAQTSVTISYLNLICLSILTITSASK 175 HSP 2 Score: 33.4982 bits (75), Expect = 3.527e-15 Identity = 22/62 (35.48%), Postives = 34/62 (54.84%), Query Frame = 2 Query: 197 AKYSSSSWPWSNKRFFVAQITLRILATAFSLAAVSLMITSTQTVLVFLVQMKVTYSSSSAWR 382 AK+S + + K F QI RI+A A S+A+ LMITS Q + + + + YS S ++ Sbjct: 6 AKFSVNQPLKTQKLFIGVQIFFRIVAIAASVASSWLMITSKQVIDIGGIVLDARYSYSPEFK 67
BLAST of CK938789 vs. ExPASy Swiss-Prot
Match: U497B_RICCO (UPF0497 membrane protein 11 OS=Ricinus communis GN=RCOM_1504680 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.427e-15 Identity = 45/115 (39.13%), Postives = 70/115 (60.87%), Query Frame = 1 Query: 253 NYAQNFSHCFL---IGCSLSYDHQYSNCPC-LFGPDEGYLQLLIRMEVTMV-LLISGCAAASAIGYVGKYGELKMGWGAVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHK 582 NY+ F L I C+ S C + + G++ LL ++ M+ L+++GC+AA+AIG++GKYG K GW +C +FCNR TIS++LSYL+ +C + LT+ SA+K Sbjct: 59 NYSSAFKFFVLANVIACACSVVSLLFLCALGRYSSNPGHVFLLFLHDLLMMSLVLAGCSAATAIGFLGKYGNTKSGWMPICDQFGQFCNRGTISMMLSYLSMVCLLILTVTSANK 173
BLAST of CK938789 vs. ExPASy Swiss-Prot
Match: U4978_VITVI (UPF0497 membrane protein 8 OS=Vitis vinifera GN=GSVIVT00018013001 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.389e-13 Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 388 MVLLISGCAAASAIGYVGKYGELKMGWGAVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHK 582 M L+++GCAAA+AIGYVG+YG GW A+C ++CNR +SL+ SYLAF+ + LTI+SA+K Sbjct: 111 MSLVLAGCAAATAIGYVGRYGNNHAGWMAICDQFDEYCNRIRLSLMFSYLAFVFILMLTIMSANK 175
BLAST of CK938789 vs. ExPASy Swiss-Prot
Match: U4977_VITVI (UPF0497 membrane protein 7 OS=Vitis vinifera GN=GSVIVT00037922001 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.389e-13 Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 1 Query: 340 GPDEGYLQLLIRMEVTMVLLISGCAAASAIGYVGKYGELKMGWGAVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSAHKL 585 G Y L + MVL +S CAAA+A+GYVG+YG+ K W AVCG FC+++ S++LS + F+C LTI++A L Sbjct: 101 GKSNHYFFLYFHDLILMVLSMSACAAATAVGYVGRYGQDKAAWMAVCGNVKMFCDKALASILLSLIGFICLFLLTIMAARNL 182
BLAST of CK938789 vs. ExPASy Swiss-Prot
Match: U497U_ARATH (UPF0497 membrane protein At4g25040 OS=Arabidopsis thaliana GN=At4g25040 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 3.037e-13 Identity = 29/65 (44.62%), Postives = 43/65 (66.15%), Query Frame = 1 Query: 382 VTMVLLISGCAAASAIGYVGKYGELKMGWGAVCGFAPKFCNRSTISLVLSYLAFLCYMGLTILSA 576 +T + IS +AA A GYVGKYG + GW +CG+ +C+R TISL +S+ +F+ LT+L+A Sbjct: 100 LTTLTAISAFSAAFAEGYVGKYGNKQAGWLPICGYVHGYCSRVTISLAMSFASFILLFILTVLTA 164 HSP 2 Score: 32.7278 bits (73), Expect = 3.037e-13 Identity = 14/44 (31.82%), Postives = 29/44 (65.91%), Query Frame = 2 Query: 251 QITLRILATAFSLAAVSLMITSTQTVLVFLVQMKVTYSSSSAWR 382 Q+++R+L ++A++ +MIT+ + V+ + + YS SSA+R Sbjct: 18 QVSMRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFR 61 The following BLAST results are available for this feature:
BLAST of CK938789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938789 ID=CK938789; Name=CK938789; organism=Citrus sinensis; type=EST; length=823bpback to top |