CN187868

Overview
NameCN187868
Unique NameCN187868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3733 contig Csv1_Contig3733:37..806. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN187868 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.686e-34
Identity = 72/176 (40.91%), Postives = 101/176 (57.39%), Query Frame = -1
Query:  249 GTPLRPKDPLNVYLFALFNENQKPGPTSERNYGLFYPNEQTVYDSPFVSTSG----NSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 764
            GTP +P + +NVY+F+LFNEN+K G  SERN+GLFYP++ +VY   F   S     NSS T ++  S +                    WC+A++ A E+ L+ A+D+ACG G  DC  IQ    C+ P+TL +HAS+ FNSY+Q+      +C FGGA   V + P Y KC + T
Sbjct:  300 GTPAKPGEAMNVYIFSLFNENRKAGLDSERNWGLFYPDQTSVYQLDFTGKSNGFHSNSSGTNSSGSSNS--------------------WCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIYIT 455          
BLAST of CN187868 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.427e-33
Identity = 74/184 (40.22%), Postives = 104/184 (56.52%), Query Frame = -1
Query:  255 GTPLRPKDPLNVYLFALFNENQKPGPTSERNYGLFYPNEQTVYD-----------SPFVSTSGNS---SSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 764
            GTP +P + ++VYLF+LFNEN+KPG  SERN+G+FY N   VY            SP  ST+G S   SS+P  N + T                  + WC+A++ A   +LQ A+D+ACG G  DC  +Q    C++P+T+ +HASYAFN+YYQ+    +  C F GA+  V + P YG C +
Sbjct:  299 GTPAKPGEEIDVYLFSLFNENRKPGIESERNWGMFYANGTNVYALDFTGENTTPVSPTNSTTGTSPSPSSSPIINGNST-------VTIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLY 475          
BLAST of CN187868 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.180e-33
Identity = 76/182 (41.76%), Postives = 102/182 (56.04%), Query Frame = -1
Query:  222 SGTPLRPKDPLNVYLFALFNENQKPGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPTGY*VGKNRE 767
            +GTPL P+   +VY++ LFNE+ +  P SE ++GLFY N   VY    +  SG  S T  AN +  Q                  T+C+A      K LQAA+D+ACG G ++C  IQ G +CY PN ++ HAS+AFNSYYQK+ R +GSCDF G A + T  P +G C FP    VG   +
Sbjct:  209 TGTPLHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVY---LLHVSG--SGTFLANDTTNQ------------------TYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFPGSKKVGNRTQ 367          
BLAST of CN187868 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.061e-32
Identity = 71/172 (41.28%), Postives = 91/172 (52.91%), Query Frame = -1
Query:  255 GSGTPLRPKDPLNVYLFALFNENQKPGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 770
            G GTPL P      YLF+LF+ENQKPGP +ER++GLF P+   VYD   +    + + TP+ N S                      WCVA   A    LQ  I+YACG    DC+PIQ G  C+ PN+L+AHASY  N+YYQ       +CDF G   V +  P YG C++
Sbjct:  298 GKGTPLMPNRTFETYLFSLFDENQKPGPIAERHFGLFNPDFTPVYDLGLLRDGASVAPTPSPNPSPNPSPKPAPSGGGK--------WCVAKDGANGTDLQNNINYACGF--VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGCKY 459          
BLAST of CN187868 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.336e-31
Identity = 69/173 (39.88%), Postives = 97/173 (56.07%), Query Frame = -1
Query:  246 GTPLRPKDPLNVYLFALFNENQKPGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPTG 764
            GTPL P  P++ Y+FAL++EN KPGP+SER +GLF  +   VYD     +S +SS TP+   + +                    WCV    A  ++LQA++D+ACG G  DC  IQ G  C++PN + +HA+YA N Y+QK  ++   CDF   A V +Q P Y  C +P G
Sbjct:  299 GTPLMPGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYDVGLAKSS-SSSQTPSGKVTSSG-------------------WCVPKKGATNEELQASLDWACGHG-IDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYPGG 450          
BLAST of CN187868 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.745e-31
Identity = 67/172 (38.95%), Postives = 93/172 (54.07%), Query Frame = -1
Query:  252 SGTPLRPKDPLNVYLFALFNENQKPGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFP 767
            +GTP  P   +  Y++ L+NE+ +PGP SE+N+GLFY N   VY       +G   +    N                      QT+C+A      K LQAA+D+ACG G  DC  + +G +CY+P+ + AH++YAFN+YYQK  + +GSCDF G A V T  P  G C FP
Sbjct:  297 TGTPKHPGTAVTTYIYELYNEDTRPGPVSEKNWGLFYTNGTPVYTLRLAG-AGAILANDTTN----------------------QTFCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTCVFP 445          
BLAST of CN187868 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.279e-31
Identity = 68/171 (39.77%), Postives = 96/171 (56.14%), Query Frame = -1
Query:  255 SGTPLRPKDPLNVYLFALFNENQKPGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 767
            SG P +P  P+N Y++ L+NE+++ GP SERN+G+ +PN  +VY    +S SG SSS      S                      +CVA A+A + KL   +++ACG+G A+C  IQ G  CY PN +++HAS+AFN YYQK     G+CDF G A   T+ P Y  C +
Sbjct:  300 SGPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVYP---LSLSGGSSSAALNGSSM---------------------FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446          
BLAST of CN187868 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 8.961e-28
Identity = 68/180 (37.78%), Postives = 97/180 (53.89%), Query Frame = -1
Query:  228 SGTPLRPKDPLNVYLFALFNENQKPGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPTGY*VGKN 767
            +GTP RP   ++ Y++ L+NE+ K G  SE+N+GLF  N + VY    V    NS S  A + +                    QT+C A   A  K LQAA+D+ACG G  DC PI++G TCY+P+ + AHA+YAF++YY +      +C+F G A + T  P +G C F      G+N
Sbjct:  306 TGTPKRPGIAVSTYIYELYNEDTKAG-LSEKNWGLFNANGEPVY----VLRLTNSGSVLANDTTN-------------------QTYCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTCVFAGSRGNGRN 461          
BLAST of CN187868 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.480e-22
Identity = 54/172 (31.40%), Postives = 85/172 (49.42%), Query Frame = -1
Query:  249 GTPLRPKDPLNVYLFALFNENQKPGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 764
            GTP RP  P+  ++F+LFNENQK G  ++R++G+ +P+   +YD  F   +  +   P    +                   GQ WCV    A E +L+  +  AC +    C  +  G  CY+P ++  HASYA NSY+ +   ++  C F G A+  T  P   +C+FP+
Sbjct:  317 GTPSRPGLPIPTFVFSLFNENQKSGSGTQRHWGILHPDGSPIYDVDFTGQTPLTGFNPLPKPTNN-------------VPYKGQVWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFRNQSIQCFFNGLAHETTTNPGNDRCKFPS 475          
BLAST of CN187868 vs. ExPASy Swiss-Prot
Match: E13L1_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 1 OS=Arabidopsis thaliana GN=At3g58100 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.930e-19
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = -1
Query:  249 QTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 515
            + WCVA  NA +  LQ AI++ACG+GGADC PIQ+G  C DP  ++  AS+ FN+YY K   +  +C+F   A + +  P  G C++P+
Sbjct:   39 ELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKYPS 127          
The following BLAST results are available for this feature:
BLAST of CN187868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
E1313_ARATH1.686e-3440.91Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E1312_ARATH1.427e-3340.22Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E131_ARATH3.180e-3341.76Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E13B_WHEAT2.061e-3241.28Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E137_ARATH1.336e-3139.88Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E133_ARATH1.745e-3138.95Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E134_ARATH2.279e-3139.77Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E132_ARATH8.961e-2837.78Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
EA6_ARATH1.480e-2231.40Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E13L1_ARATH9.930e-1943.82Glucan endo-1,3-beta-glucosidase-like protein 1 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005C04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187868 ID=CN187868; Name=CN187868; organism=Citrus sinensis; type=EST; length=770bp
GAGGCATAATCATTAGAATAAATACAATAAGGATTTGATCATATTGACAC
TAGAGTCAAACCAACTGATAACAACCGCACCCACTCAGCGTACTAGTATA
TAAAATTTAAATACAAGGGAGAAAAATTAATGTTCCAATCGTCTAAATCT
ATCAGAAAAAATCATCACCAATCGTAAGCCGCGAGAAAGCTCCAAATCTG
CAGACCACAAATCAGCTAATGCTCCCTATTTTTTCCCACTCAATAGCCAG
TTGGGAACTGGCATTTTCCATATTTAGGAGCCTGCGTGACCACGTAGGCC
GCACCACCAAAATCACAAGATCCAGCCTTACGCACTTGCTTCTGATAATA
ACTATTGAAGGCATACGATGCATGGGCTTCTAACGTGTTAGGATCGTAAC
ACGTGGCGCCCTCTTGAATCGGACGGCAATCAGCGCCTCCCTCGCCGCAG
GCATAATCAATTGCGGCTTGCAACTTTTTCTCACCAGCATTCGCGTTAGC
CACGCACCAAGTCTGTCCCGCCGCCGAGGGCGACACGTCACCACCGCCTC
CTCCGCTCACCGGAACTTGAGTCTTGCTCTTATTGGCTGCCGGCGTTGAG
CTTGAGTTCCCACTAGTTGACACAAACGGCGAGTCGTACACCGTCTGTTC
GTTGGGATAAAACAACCCGTAATTCCTTTCCGATGTGGGACCCGGTTTTT
GATTCTCATTGAACAAAGCGAAGAGGTAAACGTTAAGTGGGTCCTTTGGT
CTCAAGGGGGTCCCACTTCC
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