CN187858

Overview
NameCN187858
Unique NameCN187858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_PARUW (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Protochlamydia amoebophila (strain UWE25) GN=mraW PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.850e-32
Identity = 76/177 (42.94%), Postives = 107/177 (60.45%), Query Frame = 3
Query:  246 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRAR 776
            V+L EV++ F   + +  F+D TLGA GH+ AI+  HPE++L++G+D DP+AL  A   L            K      NF      L +I      S +D +L+DLG+SSMQ++ PERGFS   DGPLDMRM+P   L A DI+N+W + ++G++ R+YGEE  WRL    IV+AR
Sbjct:   11 VLLEEVIEAFQPVQ-LKVFIDGTLGAGGHAEAILEHHPEIELYLGIDQDPNALNIANKRLEKWKQ-------KILLKQGNFSQFDIFLKEIGF----SSMDGLLVDLGVSSMQLDQPERGFSFSKDGPLDMRMNPEGKLTAADIVNTWSEHDLGKIFRDYGEEKKWRLAARTIVQAR 175          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_BREBN (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=mraW PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.515e-25
Identity = 69/167 (41.32%), Postives = 94/167 (56.29%), Query Frame = 3
Query:  300 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            +VDCTLG AGHSS I     E    I +D D  AL  AR  L S +        +      NFRHIK ++    +++  SGVD +L DLG+SS Q++  ERGFS   D PLDMRMD  A L A DI+N W + E+ +++  YGEE   R +  +IV+ R +  + +T
Sbjct:   28 YVDCTLGGAGHSSLIASKLTEGGRLIAIDQDDWALDNARERLASYMD-------RVTLVKSNFRHIKDIV----KDLGLSGVDGVLFDLGVSSPQLDEGERGFSYNADAPLDMRMDQQAPLSAYDIINEWDEEEIAKIIWLYGEEKFSRRIARQIVQQRKKQPIQTT 183          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_DESRM (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Desulfotomaculum reducens (strain MI-1) GN=mraW PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.675e-24
Identity = 68/168 (40.48%), Postives = 100/168 (59.52%), Query Frame = 3
Query:  300 FVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            +VDCTLG AGHS  I+R   PE KL +G+D DP+A+A A   L     GQ H         +NF  IK +L ++      S VD IL DLG+SS Q++ PERGFS + D  LDMRM P  ++ A++++N   + E+  ++R YGE+   + + + IV+ R +  +H+T
Sbjct:   25 YVDCTLGGAGHSLEILRRLGPEGKL-VGIDQDPAAIANAAEKLQEF-PGQFH------AVQRNFFQIKQILREM----AISEVDGILFDLGVSSYQLDTPERGFSYMHDAELDMRMGPDQTISAKELVNDISEEELATIIRRYGEDRWAKRIASFIVKERKKRAIHTT 180          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_SALTO (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=mraW PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.187e-24
Identity = 73/192 (38.02%), Postives = 103/192 (53.65%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITS------FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            PV+L   L++ S +   T       +VD TLG  GH+ AI+ AHP   L +G+D D  ALA AR  L            + H     +  +  VL +I   +    VD IL DLG+SS+Q++ P+RGF+   D PLDMRMD    + AE+++NS+   E+ RVLR YGEE     + + IVR R R  + S+
Sbjct:   10 PVLLERCLELLSPALDRTGQTGRTVYVDATLGLGGHAEAILTAHPRTML-VGLDRDTEALAHARVRLARFAD-------RVHLEHAVYDELPDVLDRIGHPV----VDGILFDLGVSSLQLDAPDRGFAYAQDAPLDMRMDQSRGVTAEEVVNSYSHPELARVLRVYGEEKFASRIASAIVRERDRAPITSS 189          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_SALAI (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Salinispora arenicola (strain CNS-205) GN=mraW PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.857e-24
Identity = 70/191 (36.65%), Postives = 106/191 (55.50%), Query Frame = 3
Query:  243 PVMLGEVLDVFS-----SSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            PV+L   L++ +     + RT+  +VD TLG  GH+ A++  HP+  L +G+D D  ALA AR  L            + H     +  +  VL ++   +    VD IL DLG+SS+Q++ P+RGF+   D PLDMRMD    L AE+++N++P  ++ RVLR YGEE     + + IVR R R  + S+
Sbjct:   14 PVLLERCLELLAPALGRAGRTV--YVDATLGLGGHAEAVLATHPQTML-VGLDRDTEALAHARVRLARFAD-------RVHLEHAVYDELPDVLDRLGHPV----VDGILFDLGVSSLQLDAPDRGFAYAQDAPLDMRMDQTRGLTAEEVVNTYPHPDLARVLRVYGEEKFAPRIASAIVRERERDPITSS 190          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_HELMI (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=mraW PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.857e-24
Identity = 71/186 (38.17%), Postives = 105/186 (56.45%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            PV+L +VL+V    R    ++D T+G  GHS+AI++        IG+D DP+ALA A   L S          +      NFRHI +V+ ++    L   +D IL+D+G+SS Q++  ERGF+   D PLDMRM+P ++L A  +LN  P+ E+ R+LR+YGEE   + +   IV+ R    L  T
Sbjct:    7 PVLLHQVLEVLKP-RPEGVYLDGTVGGGGHSAAILQKLSGRGRVIGLDQDPAALAAAGRKLASFGD-------RVTLVRSNFRHIGAVVAELG---LTGKIDGILLDIGVSSHQLDEAERGFTYRMDAPLDMRMNPESALTASKLLNEAPEGEIARILRDYGEERWAKRIAQFIVKRRALQPLERT 181          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_PAESJ (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Paenibacillus sp. (strain JDR-2) GN=mraW PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.731e-24
Identity = 71/170 (41.76%), Postives = 93/170 (54.71%), Query Frame = 3
Query:  300 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRS--GVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            +VDCTLG AGHS  I+         I  D D +AL  AR  L         P++   T  K NFR+++ +L   D   +     VD IL DLG+SS Q++  ERGFS   D PLDMRMD   +L A DI+NSW + E+ R+L  YGEE   R +  KIV+AR    + +T
Sbjct:   24 YVDCTLGGAGHSERIVSQLSGGGRLIAFDQDDAALDNARVRLA--------PYMDRVTLVKSNFRYLEEMLLTCDVPTVDGVPQVDGILFDLGVSSPQLDEAERGFSYNHDAPLDMRMDQGGALTAYDIVNSWEEREISRILHVYGEEKFARSIARKIVQARENAPIETT 185          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_BACP2 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Bacillus pumilus (strain SAFR-032) GN=mraW PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.364e-24
Identity = 71/185 (38.38%), Postives = 101/185 (54.59%), Query Frame = 3
Query:  246 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            V+L E +D  +     T +VDCTLG AGHSS ++    E    IG D D +AL  AR  L       A           NFR++K  L +  + I  + VD ++ DLG+SS Q++ PERGFS   D PLDMRMD  A+L A+ ++N WP  ++ R+  +YGEE   + +  KI  AR +  + +T
Sbjct:    7 VLLKETVDGLNVKEDGT-YVDCTLGGAGHSSYLLSQLSEKGTLIGFDQDDAALDHAREKL-------AGSKANILFIKSNFRYLKERLNE--QGI--TSVDGVIFDLGVSSPQLDTPERGFSYHHDAPLDMRMDQSAALSAKKVVNEWPFEDLVRIFYKYGEEKFSKQIARKIEEARKKAPIETT 179          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_HELMO (S-adenosyl-L-methionine-dependent methyltransferase mraW (Fragment) OS=Heliobacillus mobilis GN=mraW PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.852e-23
Identity = 69/186 (37.10%), Postives = 101/186 (54.30%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            PV+L EVL+     R    ++D T+G  GHS+AI+         IG+D DP ALA AR  L            +      NFR + SV+ ++ +   +  +D IL+D+G+SS Q++  ERGF+   + PLDMRM+P  ++ A  ILN +P+ E+ R+L EYGEE   + +   IV  R    L ST
Sbjct:    7 PVLLEEVLEALQP-RPDGLYLDGTVGGGGHSAAILEKTAGQGRLIGLDQDPRALAAARIKLEKFAD-------QVTLVRSNFRQLGSVVEELGQ---KGKIDGILLDIGVSSHQLDEAERGFTYRAEAPLDMRMNPDGAVTAAQILNEYPEGEIFRILWEYGEERWSKRIAQFIVNRRTEQPLAST 181          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_BIFAA (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=mraW PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.852e-23
Identity = 70/180 (38.89%), Postives = 103/180 (57.22%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRAR 776
            PV+L + +D+ + +  +  +  VDCTLG AGHS+A ++A P  +L IG+D D  ALA A   +   + G A      H    +F  + S  G +D+      V+A+ MDLG+SS+Q++  ERGFS   D PLDMRMD    L AE +L  +  A++ R+ R YGEE   + +  +IVR R
Sbjct:   10 PVLLRDCVDLVAPALAKPGSIAVDCTLGLAGHSTAFLKASPNARL-IGIDRDTEALALATKRME--MEGLADRFTPVHAAFDDFSQVLSDQG-VDK------VNAVFMDLGLSSLQIDETERGFSYSHDAPLDMRMDVTQPLTAEQVLAEYSFADLVRIFRAYGEERFSKQIAREIVRRR 179          
The following BLAST results are available for this feature:
BLAST of CN187858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MRAW_PARUW2.850e-3242.94S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_BREBN1.515e-2541.32S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_DESRM1.675e-2440.48S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_SALTO2.187e-2438.02S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_SALAI2.857e-2436.65S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_HELMI2.857e-2438.17S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_PAESJ3.731e-2441.76S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_BACP26.364e-2438.38S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_HELMO1.852e-2337.10S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_BIFAA1.852e-2338.89S-adenosyl-L-methionine-dependent methyltransferas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005B21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187858 ID=CN187858; Name=CN187858; organism=Citrus sinensis; type=EST; length=800bp
CTTAATAGCTGCTGTGTTTGGAGTGTCTCTTCCAATCCCATCCCTGGGCC
TGTGTTGCTGTTTTCACAACGTTTCCATTTCGCGCCGCACATGACAGTAA
GAATAAGAAGGTGGCGAAGGCGAAAGCAACGTCAGCAAGAGTGGGAGTGG
GAATGGGACTGGTGAAGGAAAAGAGGAGAACTCGTTCTAACAAAGATTAT
GACTATGAATCGATTATTCAGCAGCAGCAATCATCTCACATTCCAGTGAT
GTTGGGTGAAGTATTGGACGTGTTCTCATCGTCGAGGACAATTACCTCTT
TTGTCGATTGCACTTTGGGAGCTGCTGGTCATTCCTCTGCGATCATTCGG
GCCCACCCTGAATTGAAACTTCATATAGGTGTGGATGTTGATCCTTCGGC
ACTTGCAAAGGCTCGAGCTCATCTCAATTCTTTATTGCACGGCCAAGCTC
ATCCCCACCTGAAAACACATACTTTTGCGAAAAACTTCAGACATATCAAA
TCCGTGCTTGGTCAGATTGATGAGAATATATTACGCTCTGGAGTTGATGC
CATCTTAATGGACTTGGGAATGTCATCAATGCAGGTGAACAATCCTGAAA
GAGGCTTCAGTGTGCTTGGCGATGGACCACTTGATATGCGGATGGATCCT
CANGCAAGTCTGAAAGCAGAAGACATATTAAATTCATGGCCAGATGCTGA
AGTGGGGCGAGTCTTGCGGGAGTATGGAGAAGAAAGCAACTGGCGTTTGC
TTCAAAATAAAATAGTTCGGGCTCGCCTTCGTGGTGGATTGCATTCTACT
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