CN187848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187848 vs. ExPASy Swiss-Prot
Match: DOF52_ARATH (Dof zinc finger protein DOF5.2 OS=Arabidopsis thaliana GN=DOF5.2 PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 6.648e-31 Identity = 75/140 (53.57%), Postives = 93/140 (66.43%), Query Frame = -1 Query: 367 PGAWN-IPWIPQPTSPKTPSSAPNSPTLGKHSREESLVKASNSEGQEQ---HKENNAERCLWVPKTLRIDDPGDAAKSSIWTTLGIKNDK-ADSIGRGGLFKAFQQKND--GRGHIAGTSPVLQANPAALSRSLNFQESS 765 PGAWN W+PQP SP S PNSPTLGKHSR+E+ + + + + +++ ERCLWVPKTLRIDDP +AAKSSIW TLGIK D+ AD+ G F++ ++ G + G P LQANPAALSRS NF ESS Sbjct: 323 PGAWNSFTWMPQPNSPS--GSNPNSPTLGKHSRDENAAEPGTAFDETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGIKKDENADTF---GAFRSSTKEKSSLSEGRLPGRRPELQANPAALSRSANFHESS 457
BLAST of CN187848 vs. ExPASy Swiss-Prot
Match: DOF33_ARATH (Dof zinc finger protein DOF3.3 OS=Arabidopsis thaliana GN=DOF3.3 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.028e-23 Identity = 69/132 (52.27%), Postives = 79/132 (59.85%), Query Frame = -1 Query: 373 WNIPWIP--QPTSPKTPS-SAPNSPTLGKHSREESLVKASNSEGQEQHKENNAERCLWVPKTLRIDDPGDAAKSSIWTTLGIKNDKADSIGRGGLFKAFQQKND-GRGHIAGTSPVLQANPAALSRSLNFQE 756 W IP +P Q +SP + S NSPTLGKH R+E K N ++Q C+ VPKTLRIDDP +AAKSSIWTTLGIKN+ GG+FK F K A SPVL ANPAALSRS NF E Sbjct: 322 WTIPMLPPHQSSSPISQKCSNTNSPTLGKHPRDEGSSKKDNETERKQKAG-----CVLVPKTLRIDDPNEAAKSSIWTTLGIKNEA--MCKAGGMFKGFDHKTKMYNNDKAENSPVLSANPAALSRSHNFHE 446
BLAST of CN187848 vs. ExPASy Swiss-Prot
Match: DOF55_ARATH (Dof zinc finger protein DOF5.5 OS=Arabidopsis thaliana GN=DOF5.5 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.453e-17 Identity = 60/131 (45.80%), Postives = 72/131 (54.96%), Query Frame = -1 Query: 373 WNIPWIPQPTSPKTPSSAPNSPTLGKHSREESLVKASNSEGQEQHKENNAERCLWVPKTLRIDDPGDAAKSSIWTTLGIKNDKADSIGRGGLFKAFQQKND---GRGHIAGTSPVLQANPAALSRSLNFQE 756 W++P + P S S+P S TLGKHSR+E E K+ + VPKTLRIDDP +AAKSSIWTTLGIKN+ +F F K + TS VL ANPAALSRS+NF E Sbjct: 190 WSMPVLSSPVS-----SSPTS-TLGKHSRDED----------ETVKQKQRNGSVLVPKTLRIDDPNEAAKSSIWTTLGIKNEV--------MFNGFGSKKEVKLSNKEETETSLVLCANPAALSRSINFHE 296 The following BLAST results are available for this feature:
BLAST of CN187848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187848 ID=CN187848; Name=CN187848; organism=Citrus sinensis; type=EST; length=774bpback to top |