CK938728

Overview
NameCK938728
Unique NameCK938728
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13771 contig Csv1_Contig13771:1181..1908. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938728 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.002e-62
Identity = 115/117 (98.29%), Postives = 115/117 (98.29%), Query Frame = 3
Query:    3 EAQKQFFEAMXHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGAQSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 353
            EAQKQFFEAM HRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGA SQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  378 EAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CK938728 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.243e-46
Identity = 84/117 (71.79%), Postives = 98/117 (83.76%), Query Frame = 3
Query:    3 EAQKQFFEAMXHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGAQSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 353
            EA+KQ  E M HRMH+D S++L+GKLLFGIEK PE+LN VRPAG  LVDDW CLK++VRTFE+HCG+ SQYGMKHMRS AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  368 EARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CK938728 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.113e-45
Identity = 84/117 (71.79%), Postives = 99/117 (84.62%), Query Frame = 3
Query:    3 EAQKQFFEAMXHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGAQSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 353
            EA+KQ  EAM HR H+D+S+KLIG+LLFGIEKG E+L+ VRPAG PLVD+W CLK++V+TFE+HCG+ SQYGMKHMRS ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  377 EAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CK938728 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 7.215e-45
Identity = 80/117 (68.38%), Postives = 98/117 (83.76%), Query Frame = 3
Query:    3 EAQKQFFEAMXHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGAQSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 353
            EAQKQ  EAM HR+H+D+S+ L+GK+LFGI +GPE+LN VR AGQPLVDDW CLK+ VR FE HCG+ SQYG+KHMRS ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  378 EAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CK938728 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 5.717e-42
Identity = 81/117 (69.23%), Postives = 95/117 (81.20%), Query Frame = 3
Query:    3 EAQKQFFEAMXHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGAQSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 353
            EAQKQ  EAM HR+HVD+SI LIG LLFG+E G  +LN VRP+G+PLVDDW CLKSLVR FE HCG+ SQYG+KHMRS+AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  363 EAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of CK938728 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.321e-30
Identity = 62/117 (52.99%), Postives = 80/117 (68.38%), Query Frame = 3
Query:    3 EAQKQFFEAMXHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGAQSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 353
            E  +Q  +A+ HR H+D S++LIG LLFG +K   IL +VR  G PLVDDWGCLKS+VR FE+ CG+ +QYGMKHMR+ ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  381 EILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CK938728 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.843e-30
Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = 3
Query:   12 KQFFEAMXHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGAQSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 353
            KQ  E + HR H+D S++LIG LL+G  KG  +L +VR  G  LVDDW CLKS+VR FE+HCG  +QYGMKHMR+ ANICN+G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  382 KQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CK938728 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.615e-28
Identity = 58/114 (50.88%), Postives = 78/114 (68.42%), Query Frame = 3
Query:   12 KQFFEAMXHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGAQSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 353
            KQ  E + HR H+D S++LIG LL+G EK   +L +VR  G PLVDDW CLKS+VR +E+HCG+ +QYGMKHMR+ ANICN+G+ +  M +A   AC    +G     + G+SA
Sbjct:  380 KQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of CK938728 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.136e-28
Identity = 57/114 (50.00%), Postives = 77/114 (67.54%), Query Frame = 3
Query:   12 KQFFEAMXHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGAQSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 353
            +Q  E + HR H+D S++LIG LL+G  K   +L++VR  G PLVDDW CLKS+VR FE+HCG+ +QYGMKHMR+  N+CN+G+ K  M EA   AC    +G     + G+SA
Sbjct:  362 EQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
BLAST of CK938728 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 4.397e-26
Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 3
Query:   12 KQFFEAMXHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGAQSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 302
            K+  E   HR H+D S++LI  +LFG      +LN VR  G PLVDDW CLKS+VR FE HCG+ +QYGMKHMR+ AN+CN G+ KE M EAS  AC
Sbjct:  373 KELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
The following BLAST results are available for this feature:
BLAST of CK938728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI1.002e-6298.29Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU2.243e-4671.79Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_VICSA1.113e-4571.79Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEG_ARATH7.215e-4568.38Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPEA_ARATH5.717e-4269.23Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO1.321e-3052.99Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN3.843e-3052.63Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU1.615e-2850.88Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
LEGU_CANEN6.136e-2850.00Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPEB_ARATH4.397e-2656.70Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004439_A09 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938728 ID=CK938728; Name=CK938728; organism=Citrus sinensis; type=EST; length=727bp
GGGAAGCTCAGAAGCAGTTTTTTGAAGCAATGNNNCATAGAATGCATGTA
GACCACAGCATCAAACTTATTGGAAAGCTCTTATTTGGAATTGAGAAAGG
TCCAGAGATCTTGAACACTGTTCGACCTGCTGGTCAGCCTCTTGTTGATG
ACTGGGGCTGCCTCAAATCACTGGTGAGGACTTTTGAGTCGCACTGTGGA
GCTCAATCGCAATATGGAATGAAGCACATGCGTTCTCTTGCAAACATCTG
TAATACAGGAATTGGGAAAGAGAAGATGGCTGAAGCATCAGCACAAGCCT
GTGAAAATATTCCTTCTGGTCCTTGGAGTTCTCTCGACAAAGGATTCAGT
GCATAAAGAAGCCGAGAACTGTGCGAATATCATAAGCCAGTCTTGAAATA
TGTTAGTTTTCATTATAGTCGCCAATATGGCAATATCTATTTTCATTTGG
CTGATGATTGCTTCCATTTATGGCAATGTCTATTTTCATTTGGCTGGTGA
TTGCTTCCTTGTAATTATTATATTTAAAAGCTCTTCCCTGCCAGACCGCA
GTTGTAATTTGATAGTATATATTTTGGATGTATGCGATGCTATTTTATGC
TTATGTAGCTATATTTGTTCCTGATTTGTAGACCGTGCAACTCAACCCTC
TTCGTGGTGTTGCTCTAAATATTGAAATAAAAGCTCTAATTTTGGATTAA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
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