CN187843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187843 vs. ExPASy Swiss-Prot
Match: PGDH_MACFA (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Macaca fascicularis GN=HPGD PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.030e-23 Identity = 71/178 (39.89%), Postives = 96/178 (53.93%), Query Frame = 1 Query: 127 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS 654 G A VTG A GIGRA + AL KG V +VD + E G + A +++ KF +FI+CDV + + F K V +G LDI +N+AG++N ++W TL +NLV+VI T + M Q + G+IINM S AGL P P+Y ASK G+V FTRS Sbjct: 5 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDE---KFEPQ----KTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE-----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRS 164
BLAST of CN187843 vs. ExPASy Swiss-Prot
Match: PGDH_HUMAN (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Homo sapiens GN=HPGD PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 8.978e-23 Identity = 69/178 (38.76%), Postives = 95/178 (53.37%), Query Frame = 1 Query: 127 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS 654 G A VTG A GIGRA + AL KG V +VD + E G + A ++++ +FI+CDV + + F K V +G LDI +N+AG++N ++W TL +NLV+VI T + M Q + G+IINM S AGL P P+Y ASK G+V FTRS Sbjct: 5 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDEQFEP-------QKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE-----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRS 164
BLAST of CN187843 vs. ExPASy Swiss-Prot
Match: PGDH_CAVPO (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Cavia porcellus GN=HPGD PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.531e-22 Identity = 69/178 (38.76%), Postives = 93/178 (52.25%), Query Frame = 1 Query: 127 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS 654 G A VTG A GIGRA + L KG V +VD + E G + A +++E +FI+CDV + F K V +G LDI +N+AG++N ++W TL +NLV+VI T + M Q + GVIINM S AGL P P+Y ASK G++ FTRS Sbjct: 5 GKVALVTGAAQGIGRAFAEGLLHKGAKVALVDWNLEAGVKCKAALDEEFEP-------QKTLFIQCDVADQEQLRDTFTKVVDYFGRLDILVNNAGVNNE-----------KNWEKTLQINLVSVISGTYLGLDYMSKQHGGEGGVIINMSSLAGLMPVAQQPVYCASKHGIIGFTRS 164
BLAST of CN187843 vs. ExPASy Swiss-Prot
Match: PGDH_BOVIN (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Bos taurus GN=HPGD PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.926e-22 Identity = 68/178 (38.20%), Postives = 93/178 (52.25%), Query Frame = 1 Query: 127 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS 654 G A VTG A GIGRA + AL KG V +VD + E G + A ++++ +FI+CDV + F K V +G LDI +N+AG++N ++W TL +NLV+VI T + M Q + G+ INM S AGL P P+Y ASK G+V FTRS Sbjct: 5 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVKCKAALDEQFEP-------QKTLFIQCDVADQEQLRDTFRKVVDHFGKLDILVNNAGVNNE-----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGININMSSLAGLMPVAQQPVYCASKHGIVGFTRS 164
BLAST of CN187843 vs. ExPASy Swiss-Prot
Match: PGDH_MOUSE (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Mus musculus GN=Hpgd PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.693e-21 Identity = 65/178 (36.52%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 127 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS 654 G A VTG A GIG+A + AL G V +VD + E G + A ++++ +F++CDV + + F K V +G LDI +N+AG++N ++W TL +NLV+VI T + M Q + G+IINM S AGL P P+Y ASK G++ FTRS Sbjct: 5 GKVALVTGAAQGIGKAFAEALLLHGAKVALVDWNLEAGVKCKAALDEQFEP-------QKTLFVQCDVADQKQLRDTFRKVVDHFGRLDILVNNAGVNNE-----------KNWEQTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIIGFTRS 164
BLAST of CN187843 vs. ExPASy Swiss-Prot
Match: PGDH_RAT (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Rattus norvegicus GN=Hpgd PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.772e-21 Identity = 65/178 (36.52%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 127 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS 654 G A VTG A GIG+A + AL G V +VD + E G + A ++++ +FI+CDV + + F K V +G LDI +N+AG++N ++W TL +NLV+VI T + M Q + G+IIN+ S AGL P P+Y ASK G++ FTRS Sbjct: 5 GKVALVTGAAQGIGKAFTEALLLHGAKVALVDWNLETGVKCKAALDEQFEP-------QKTLFIQCDVADQKQLRDTFRKVVDHFGRLDILVNNAGVNNE-----------KNWEQTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINISSIAGLMPVAQQPVYCASKHGIIGFTRS 164
BLAST of CN187843 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 9.291e-20 Identity = 68/176 (38.64%), Postives = 93/176 (52.84%), Query Frame = 1 Query: 133 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENA-KFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSL 657 + +TGGASGIG A A G+ V V D+ E +G+ A+V KEN + H F++ D+T+ A E V T+GGLD+ IN+AGI P HE + W L VNL + ++ A+ M AA K G IIN S GL + P Y+ASKGGV+ T+S+ Sbjct: 7 TVLITGGASGIGYAAVQAFLGQQANVVVADIDEAQGE---AMVRKENNDRLH---------FVQTDITDEAACQHAVESAVHTFGGLDVLINNAGIEIVAPIHEMELS---DWNKVLQVNLTGMFLMSKHALKHMLAAGK-GNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSM 166
BLAST of CN187843 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.316e-17 Identity = 62/176 (35.23%), Postives = 90/176 (51.14%), Query Frame = 1 Query: 133 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENA-KFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSL 657 + +TGGASGIG A A + V V D+ E +G+ A++ KEN + H F+ D+T+ A V +GGLD+ IN+AGI P HE + +W L+VNL + ++ A+ M + K G IIN S G+ + P Y+ASKGGV+ TRS+ Sbjct: 7 TVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGE---AMIRKENNDRLH---------FVHTDITDEPACQNAIRSAVDKFGGLDVLINNAGIEIVAPIHEMELS---NWNKVLNVNLTGMFLMSKHALKYMLKSGK-GNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSM 166
BLAST of CN187843 vs. ExPASy Swiss-Prot
Match: DHR11_CHICK (Dehydrogenase/reductase SDR family member 11 OS=Gallus gallus GN=DHRS11 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.232e-16 Identity = 61/186 (32.80%), Postives = 95/186 (51.08%), Query Frame = 1 Query: 112 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMF-IRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAK-KPGVIINMGSSAG--LYPFYTDPIYSASKGGVVLFTRSL 657 ME G A VTG + GIG A++ AL G+ V S +K +++AA + + G+P + +CD++N + + F + G+D+CIN+AG++ P P +T+G WR +DVN++AV CT++A M+ G IIN+ S G + P YSA+K V T L Sbjct: 1 MERWTGRVALVTGASVGIGAAVARALVQHGMKVVGCARSVDKIEKLAAECQ--------SAGYPGTLIPYKCDLSNEEEILSMFSAIKTLHQGVDVCINNAGLARPEPLLSGKTEG---WRTMIDVNVMAVSICTREAYQSMKERNIDDGHIININSMNGHSVVPQSVVHFYSATKYAVTALTEGL 175
BLAST of CN187843 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16 Identity = 57/173 (32.95%), Postives = 86/173 (49.71%), Query Frame = 1 Query: 142 VTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSL 657 VTGG+ G+GRA+++ + V V S EE+ EV +E+ + A+ +R DVT D E V +G LD+ IN+AG+ NP+P HE + +W +D NL +++AI G +INM S + P+ Y+ASKGG+ L T +L Sbjct: 12 VTGGSKGLGRAMAVRFGQEQSKVVVNYRSNEEEALEVKKEIEEAGGQ---------AIIVRGDVTKEEDVVNLVETAVKEFGSLDVMINNAGVENPVPSHELSLE---NWNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETL 172 The following BLAST results are available for this feature:
BLAST of CN187843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187843 ID=CN187843; Name=CN187843; organism=Citrus sinensis; type=EST; length=677bpback to top |