CK938716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938716 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.569e-33 Identity = 65/85 (76.47%), Postives = 76/85 (89.41%), Query Frame = 2 Query: 77 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSTGFGFVTFRDEKSTRGAIKGMNGQNLDGRTITVNEAQ 331 MASGDVE+RCFVGGLAWAT D +L AF YGD+++SKIINDRETGRS GFGFVTF+DEK+ + AI+GMNGQ+LDGR+ITVNEAQ Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CK938716 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.665e-32 Identity = 65/85 (76.47%), Postives = 75/85 (88.24%), Query Frame = 2 Query: 77 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSTGFGFVTFRDEKSTRGAIKGMNGQNLDGRTITVNEAQ 331 MAS DVE+RCFVGGLAWAT D +L AF YG++L+SKIINDRETGRS GFGFVTF+DEKS + AI+GMNGQ+LDGR+ITVNEAQ Sbjct: 1 MASPDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CK938716 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.841e-31 Identity = 63/85 (74.12%), Postives = 75/85 (88.24%), Query Frame = 2 Query: 77 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSTGFGFVTFRDEKSTRGAIKGMNGQNLDGRTITVNEAQ 331 MAS DVE+RCFVGGLAWAT + SL AF +G++++SKIINDRETGRS GFGFVTF+DEKS + AI+GMNGQ+LDGR+ITVNEAQ Sbjct: 1 MASPDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CK938716 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.405e-31 Identity = 63/81 (77.78%), Postives = 70/81 (86.42%), Query Frame = 2 Query: 89 DVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSTGFGFVTFRDEKSTRGAIKGMNGQNLDGRTITVNEAQ 331 +VE+RCFVGGLAWAT D SL +AF +GDI +SKIINDRETGRS GFGFVTF+DEKS R AI+GMNGQ LDGR ITVNEAQ Sbjct: 3 EVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQ 83
BLAST of CK938716 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.905e-28 Identity = 57/81 (70.37%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 89 DVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSTGFGFVTFRDEKSTRGAIKGMNGQNLDGRTITVNEAQ 331 +VE+RCFVGGLAWAT D+ L F +G++++SKIINDRETGRS GFGFVTF+DEKS + AI MNG+ LDGRTITVNEAQ Sbjct: 3 EVEYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQ 83
BLAST of CK938716 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.489e-28 Identity = 58/85 (68.24%), Postives = 69/85 (81.18%), Query Frame = 2 Query: 77 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSTGFGFVTFRDEKSTRGAIKGMNGQNLDGRTITVNEAQ 331 MA+ DVE+RCFVGGLAWAT++ SL AF +YG+IL+SK+I DRETGRS GFGFVTF E S AI+ MNG+ LDGR ITVN+AQ Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of CK938716 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.250e-28 Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 89 DVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSTGFGFVTFRDEKSTRGAIKGMNGQNLDGRTITVNEAQ 331 +VE+RCFVGGLAWAT D L F +GD+++SKIINDRE+GRS GFGFVTF+DEK+ R AI+ MNG+ LDGR ITVNEAQ Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
BLAST of CK938716 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.544e-28 Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 89 DVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSTGFGFVTFRDEKSTRGAIKGMNGQNLDGRTITVNEAQ 331 DVE+RCFVGGL WAT D SL AF YGD+++SKII DRETGRS GFGFVTF +++ R AI+ MNGQ+LDGR ITVNEAQ Sbjct: 3 DVEYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQ 83
BLAST of CK938716 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 8.006e-27 Identity = 54/85 (63.53%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 77 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSTGFGFVTFRDEKSTRGAIKGMNGQNLDGRTITVNEAQ 331 MA+ DVE+RCFVGGLAWAT + +L +AF +G +++SK+I DRETGRS GFGFVTF E+S AI+ MNG+ LDGR ITVN+AQ Sbjct: 1 MAAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of CK938716 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.704e-19 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 2 Query: 140 SSLHEAFGAYGDILESKIINDRETGRSTGFGFVTFRDEKSTRGAIKGMNGQNLDGRTITVNEAQ 331 +SLH AF YG++LESKII DRET RS GFGFVTF E++ R AI+GMNG+ LDGR ITVNEAQ Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQ 64 The following BLAST results are available for this feature:
BLAST of CK938716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938716 ID=CK938716; Name=CK938716; organism=Citrus sinensis; type=EST; length=430bpback to top |