CK938694

Overview
NameCK938694
Unique NameCK938694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length439
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:424..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK938694 vs. ExPASy Swiss-Prot
Match: UBL5_ARATH (Ubiquitin-like protein 5 OS=Arabidopsis thaliana GN=UBL5 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.257e-14
Identity = 34/36 (94.44%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 RADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYS 111
            RA+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Sbjct:   38 RAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN 73
The following BLAST results are available for this feature:
BLAST of CK938694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UBL5_ARATH1.257e-1494.44Ubiquitin-like protein 5 OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004439_D05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938694 ID=CK938694; Name=CK938694; organism=Citrus sinensis; type=EST; length=439bp
GGGCGAGCCGACAAGATTCGGATTCAGAAGTGGTACAACATCTACAAGGA
CCACATCACTCTCAAGGACTACGAGATTCACGACGGCATGGGCCTTGAAC
TCTATTACAGCTAAATCCACCGTTAAATATATATGCTGCTGCAAGCAGTC
AATACTACTAGGAACCATATGCTATAATAAGCAAGGGGTATTGGAAGATG
CGGCAGGGCCAACTTTACTAATACTGTCTTGTAAGAAAAAATTTGTGAAG
ACTCGTAAAAACTTATTTGTGGTTATGTAACATATCTGGGATCTGGACTT
ACTCTCCATTTTGAATGGTGTTTAGATCTTTATCAAGGTATTGAGGTACC
ACATGCTTGTCAGTCCATTAGGCTGATAGAATTTTGTGAATACCTTGGCT
AAGTGTGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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