CN187832 | Citrus Genome Database

Overview


Name	CN187832
Unique Name	CN187832
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	661

Libraries


Library Name	Type
Washington Navel Orange Stored Fruit Pulp cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9095	contig	Csv1_Contig9095:32..692.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CN187832 vs. ExPASy Swiss-Prot
Match: ENO_RICCO (Enolase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.808e-65
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = -3

Query:  264 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVDLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 659
            KLTSE+GEKVQIVGDDLLVTNPKRVEKAI+EK CNALLLKVNQIGSVTESIEAVRMSK+AGWGVMASHRSGETEDTFIADLSV LATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFR PVEPY
Sbjct:  314 KLTSEIGEKVQIVGDDLLVTNPKRVEKAIQEKACNALLLKVNQIGSVTESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRTPVEPY 445

[Close]

BLAST of CN187832 vs. ExPASy Swiss-Prot
Match: ENO1_HEVBR (Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.531e-64
Identity = 124/132 (93.94%), Postives = 128/132 (96.97%), Query Frame = -3

Query:  264 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVDLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 659
            KLTSE+GEKVQIVGDDLLVTNPKRVEKAIKEK CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSV LATGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  314 KLTSEIGEKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRKPVEPY 445

[Close]

BLAST of CN187832 vs. ExPASy Swiss-Prot
Match: ENO2_HEVBR (Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.410e-64
Identity = 124/132 (93.94%), Postives = 127/132 (96.21%), Query Frame = -3

Query:  264 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVDLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 659
            KLTSE+G KVQIVGDDLLVTNPKRVEKAIKEK CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSV LATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGA FR PVEPY
Sbjct:  314 KLTSEIGVKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGANFRTPVEPY 445

[Close]

BLAST of CN187832 vs. ExPASy Swiss-Prot
Match: ENO_ALNGL (Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.871e-62
Identity = 122/132 (92.42%), Postives = 127/132 (96.21%), Query Frame = -3

Query:  264 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVDLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 659
            KLT+E+GEKVQIVGDDLLVTNPKRVEKAIKEK CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMA HRSGETEDTFIADLSV LATGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  310 KLTAEIGEKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMA-HRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRTPVEPY 440

[Close]

BLAST of CN187832 vs. ExPASy Swiss-Prot
Match: ENO1_MAIZE (Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.871e-62
Identity = 121/132 (91.67%), Postives = 125/132 (94.70%), Query Frame = -3

Query:  264 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVDLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 659
            KLT E+G+KVQIVGDDLLVTNP RV KAI EKTCNALLLKVNQIGSVTESIEAVRMSK+AGWGVMASHRSGETEDTFIADLSV L+TGQIKTGAPCRSERLAKYNQLLRIEEELG  AVYAGAKFRAPVEPY
Sbjct:  315 KLTDEIGQKVQIVGDDLLVTNPTRVAKAINEKTCNALLLKVNQIGSVTESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDAAVYAGAKFRAPVEPY 446

[Close]

BLAST of CN187832 vs. ExPASy Swiss-Prot
Match: ENO_SOLLC (Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 9.286e-62
Identity = 118/132 (89.39%), Postives = 126/132 (95.45%), Query Frame = -3

Query:  264 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVDLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 659
            KLT+E+GE+VQIVGDDLLVTNPKRV KAI EKTCNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+V L+TGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  313 KLTAEIGEQVQIVGDDLLVTNPKRVAKAIAEKTCNALLLKVNQIGSVTESIEAVKMSKKAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGASFRKPVEPY 444

[Close]

BLAST of CN187832 vs. ExPASy Swiss-Prot
Match: ENO_ORYSJ (Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE=1 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 9.286e-62
Identity = 118/132 (89.39%), Postives = 127/132 (96.21%), Query Frame = -3

Query:  264 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVDLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 659
            K+T+E+GE+VQIVGDDLLVTNP RV KAI+EK+CNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+V LATGQIKTGAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  315 KMTAEIGEQVQIVGDDLLVTNPTRVAKAIQEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAAAVYAGAKFRAPVEPY 446

[Close]

BLAST of CN187832 vs. ExPASy Swiss-Prot
Match: ENO2_MAIZE (Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.584e-61
Identity = 118/132 (89.39%), Postives = 126/132 (95.45%), Query Frame = -3

Query:  264 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVDLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 659
            K+T E+GE+VQIVGDDLLVTNP RV KAIKEK+CNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+V L+TGQIKTGAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  315 KMTEEIGEQVQIVGDDLLVTNPTRVAKAIKEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGAIAVYAGAKFRAPVEPY 446

[Close]

BLAST of CN187832 vs. ExPASy Swiss-Prot
Match: ENO_MESCR (Enolase OS=Mesembryanthemum crystallinum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.751e-60
Identity = 117/132 (88.64%), Postives = 124/132 (93.94%), Query Frame = -3

Query:  264 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVDLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 659
            K+T+E GEKVQIVGDDLLVTNPKRV+KAI E  CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSV L+TGQIKTGAPCRSERLAKYNQLLRIEEELG +AVYAGA FR PVEPY
Sbjct:  313 KMTAECGEKVQIVGDDLLVTNPKRVKKAIDENPCNALLLKVNQIGSVTESIEAVKMSKKAGWGVMASHRSGETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYAGANFRRPVEPY 444

[Close]

BLAST of CN187832 vs. ExPASy Swiss-Prot
Match: ENO_ARATH (Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.529e-59
Identity = 113/132 (85.61%), Postives = 123/132 (93.18%), Query Frame = -3

Query:  264 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVDLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 659
            K+T+E G +VQIVGDDLLVTNPKRV KAI EK+CNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+V L+TGQIKTGAPCRSERLAKYNQLLRIEEELG+EA+YAG  FR PVEPY
Sbjct:  313 KMTTECGTEVQIVGDDLLVTNPKRVAKAIAEKSCNALLLKVNQIGSVTESIEAVKMSKKAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSEAIYAGVNFRKPVEPY 444

The following BLAST results are available for this feature:

BLAST of CN187832 vs. ExPASy Swiss-Prot

BLAST of CN187832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_RICCO	1.808e-65	95.45	Enolase OS=Ricinus communis PE=2 SV=1	[more]
ENO1_HEVBR	1.531e-64	93.94	Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1	[more]
ENO2_HEVBR	3.410e-64	93.94	Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1	[more]
ENO_ALNGL	1.871e-62	92.42	Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1	[more]
ENO1_MAIZE	1.871e-62	91.67	Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1	[more]
ENO_SOLLC	9.286e-62	89.39	Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1	[more]
ENO_ORYSJ	9.286e-62	89.39	Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE...	[more]
ENO2_MAIZE	1.584e-61	89.39	Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1	[more]
ENO_MESCR	1.751e-60	88.64	Enolase OS=Mesembryanthemum crystallinum GN=PGH1 P...	[more]
ENO_ARATH	2.529e-59	85.61	Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS05_0005B05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005B05, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN187832 ID=CN187832; Name=CN187832; organism=Citrus sinensis; type=EST; length=661bp
TTTTTTTTTTTTGAATTCTAATAAGAAAGAAACAATGCCTTAGCCCGTAA
AAAGATACTCATTTTAATAAAACATGCTCTAGGACCTTTTAACTCATACA
GCAAGGTTCAAGCTCTCAGACAAAAACTGTGTCAAAATTATTGAGGAAAT
ATCTTGGGTCACAAAATGCTAAAAACCCATAAAAATCCATTTTACATAAC
TTATTGAAGTAAACCTCCATTGCTCAAATCCAGCACCACACCAGATCAGC
ATCTCAAACTCTAGTAGGGTTCAACAGGGGCACGGAACTTGGCACCAGCA
TAAACTGCTTCAGCACCGAGCTCTTCTTCAATTCTCAGAAGCTGATTATA
CTTTGCAAGACGCTCTGACCTGCATGGTGCTCCTGTCTTAATTTGACCCG
TGGCCAAGTCCACTGAGAGATCGGCAATGAAAGTATCTTCAGTCTCACCA
CTGCGGTGGCTGGCCATCACACCCCACCCAGCTTGCTTGGACATTCTGAC
GGCTTCAATGCTCTCAGTTACAGATCCAATTTGATTAACCTTGAGAAGGA
GGGCGTTGCAGGTCTTCTCTTTGATAGCCTTCTCAACCCTCTTAGGATTG
GTGACCAAAAGATCATCTCCAACAATTTGTACTTTTTCTCCAACCTCACT
GGTTAGCTTGG