CK938692

Overview
NameCK938692
Unique NameCK938692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:59..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.808e-68
Identity = 120/148 (81.08%), Postives = 133/148 (89.86%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            MEQTFIMIKPDGVQRGL+GE+I RFEKKGF+LKGLKL++V+R FAEKHYEDLSSK FF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPA S PGTIRGD AI  GRN+IHGSDSVESA KEIALWFPDGP+NWQSS+HPW+YE
Sbjct:    1 MEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPDGPVNWQSSVHPWVYE 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.210e-67
Identity = 121/148 (81.76%), Postives = 132/148 (89.19%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            ME TFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G  NW SSLHPWIYE
Sbjct:    1 MEHTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESAKKEIALWFPEGVANWSSSLHPWIYE 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.225e-66
Identity = 121/148 (81.76%), Postives = 131/148 (88.51%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L++YI SGPVVAM+WEG+GVV TGR IIGATNP +SAPGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G   WQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNGLVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHSWIYE 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDKA_FLABI (Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.600e-66
Identity = 121/148 (81.76%), Postives = 129/148 (87.16%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            MEQTFIMIKPDGVQ GLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLSSKPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+SAPGTIRGD AI  GRN+IHGSD+VESA K I LWFP+G  NW SSLHPWIYE
Sbjct:    1 MEQTFIMIKPDGVQSGLVGEIIGRFEKKGFSLKGLKLLTVDRAFAEKHYADLSSKPFFNGLVEYIVSGPVVAMVWEGKNVVTTGREIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESARKVIGLWFPEGVANWSSSLHPWIYE 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.600e-66
Identity = 120/148 (81.08%), Postives = 129/148 (87.16%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR IIGATNP  S PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G +NWQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVLTGRKIIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVESATKEIALWFPEGVVNWQSSLHSWIYE 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.729e-66
Identity = 119/148 (80.41%), Postives = 131/148 (88.51%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            MEQTFIMIKPDGVQRGLVGEII RFEKKGF+LKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+S PGTIRGD AI  GRN+IHGSD+VESA+KEI LWFP+G  NW SSLHPWIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESPPGTIRGDFAIDIGRNVIHGSDAVESAKKEIGLWFPEGVANWSSSLHPWIYE 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_CAPAN (Nucleoside diphosphate kinase OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.655e-66
Identity = 120/148 (81.08%), Postives = 131/148 (88.51%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L+EYI SGPVV+M+WEG+GV+ TGR IIGATNP +SAPGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G   WQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVSMVWEGKGVLTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHCWIYE 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 6.079e-66
Identity = 118/148 (79.73%), Postives = 129/148 (87.16%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR +IGATNP  S PGTIRGD AI  GRN+IHGSD+V+SA KEIALWFPDG ++WQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKLIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVDSATKEIALWFPDGVVHWQSSLHSWIYE 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK1_SOYBN (Nucleoside diphosphate kinase 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.037e-65
Identity = 120/147 (81.63%), Postives = 129/147 (87.76%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            EQTFIMIKPDGVQRGL+GEII RFEKKGF LKGLKL+TVDRPFAEKHY DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPAQS PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+GP N QSS H WIYE
Sbjct:    3 EQTFIMIKPDGVQRGLIGEIISRFEKKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGPANCQSSQHSWIYE 149          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK1_PEA (Nucleoside diphosphate kinase 1 OS=Pisum sativum GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.554e-64
Identity = 117/147 (79.59%), Postives = 127/147 (86.39%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            EQTFIMIKPDGVQRGLVGEII RFEKKGF LKGLK + V+R FAEKHY DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPAQS PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G  NW+SSLH WIYE
Sbjct:    3 EQTFIMIKPDGVQRGLVGEIISRFEKKGFYLKGLKFVNVERAFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGAANWESSLHSWIYE 149          
The following BLAST results are available for this feature:
BLAST of CK938692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK1_ARATH3.808e-6881.08Nucleoside diphosphate kinase 1 OS=Arabidopsis tha... [more]
NDKB_FLABI4.210e-6781.76Nucleoside diphosphate kinase B OS=Flaveria bident... [more]
NDK1_TOBAC1.225e-6681.76Nucleoside diphosphate kinase 1 OS=Nicotiana tabac... [more]
NDKA_FLABI1.600e-6681.76Nucleoside diphosphate kinase A OS=Flaveria bident... [more]
NDK1_MESCR1.600e-6681.08Nucleoside diphosphate kinase 1 OS=Mesembryanthemu... [more]
NDK_HELAN2.729e-6680.41Nucleoside diphosphate kinase OS=Helianthus annuus... [more]
NDK_CAPAN4.655e-6681.08Nucleoside diphosphate kinase OS=Capsicum annuum P... [more]
NDK1_SPIOL6.079e-6679.73Nucleoside diphosphate kinase 1 OS=Spinacia olerac... [more]
NDK1_SOYBN1.037e-6581.63Nucleoside diphosphate kinase 1 OS=Glycine max PE=... [more]
NDK1_PEA2.554e-6479.59Nucleoside diphosphate kinase 1 OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_F04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938692 ID=CK938692; Name=CK938692; organism=Citrus sinensis; type=EST; length=753bp
GGGGCTCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTTAAAACAAGT
TGGTTTCTCTGAATCTCAAAGAAATGGAACAGACTTTCATCATGATCAAG
CCCGATGGGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGA
GAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCC
CTTTTGCTGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGT
TCTCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTTGGGA
GGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACC
CTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGGGACG
GGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGCCGAGAAAGA
GATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGCCTTC
ACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAATTGTT
CCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTATGGT
TACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAATTGAGACCAA
TCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATATACAATATT
TAAGCTTTTTTGTTGACTGTATTATGAATTGAGTTTGTTAATGGTTAGCA
CAT
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