CN187827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN187827 vs. ExPASy Swiss-Prot
Match: FBL8_ARATH (Putative F-box/LRR-repeat protein 8 OS=Arabidopsis thaliana GN=FBL8 PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.626e-80 Identity = 149/218 (68.35%), Postives = 176/218 (80.73%), Query Frame = -2 Query: 155 KTPECTNLGLAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVSDHGMEALAGGCPNLVKVKVKKCRAVTTEGADWLRARREYVVVNLDSGEAEHQDAS--DGGVQENGIEFPPQMVQ-PSV--ASSRNTRSTSFKTRLGLLSGRSLVACTL 793 KTP+CTN+GLA VAERCKLLRKLHIDGWK NRIGDEGLI VAK C NLQELVLIGVNPT++SLE + SNC NLERLALCGSDTVGD E+ CIA KC+AL+KLCIK+CP++D G++AL GCPNL+KVKVKKCR VTT+GAD LR RR +VVNLD+ E + S +GG QEN +EFPP +Q P++ AS +RS+SFK RLG LS R+ V+C L Sbjct: 325 KTPDCTNVGLALVAERCKLLRKLHIDGWKTNRIGDEGLIVVAKYCWNLQELVLIGVNPTKLSLEAIVSNCLNLERLALCGSDTVGDTELCCIAEKCLALRKLCIKNCPITDDGIKALGNGCPNLLKVKVKKCRGVTTQGADLLRKRRALLVVNLDAPETPIVEGSVGEGGAQENAVEFPPSRLQIPTIGLASGSTSRSSSFKLRLGFLSQRNFVSCAL 542
BLAST of CN187827 vs. ExPASy Swiss-Prot
Match: FB37_ARATH (F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 4.582e-75 Identity = 143/219 (65.30%), Postives = 166/219 (75.80%), Query Frame = -2 Query: 158 KTPECTNLGLAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVSDHGMEALAGGCPNLVKVKVKKCRAVTTEGADWLRARREYVVVNLDSGEAEHQDASD----GGVQENGIEFP---PQMVQPSVASSRNTRSTSFKTRLGLLSGRSLVACT 793 KTPECTN GLAA+AE+CK LRKLHIDGWKAN IGDEGL+AVAK C LQELVLIGVNPT +SL +LA+ C NLERLALCG DT GD E+SCIAAKC AL+KLCIK+CP+SD G+E LA GCP L KVK+KKC+ V ADWLR R + VN D+ E EH++A+ GG QENGIEFP Q++ S+ASS RS FK+ +GL SG SLV CT Sbjct: 292 KTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLVAVAKFCSQLQELVLIGVNPTTLSLGMLAAKCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNCPISDVGIENLANGCPGLTKVKIKKCKGVLGGCADWLRTVRPMLSVNADTMEQEHEEAASNDVVGGSQENGIEFPQLNSQIMASSIASSSRNRSGYFKSGIGLFSGMSLVPCT 510
BLAST of CN187827 vs. ExPASy Swiss-Prot
Match: SKIP2_ARATH (F-box protein SKIP2 OS=Arabidopsis thaliana GN=SKIP2 PE=1 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.517e-67 Identity = 132/219 (60.27%), Postives = 158/219 (72.15%), Query Frame = -2 Query: 158 KTPECTNLGLAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVSDHGMEALAGGCPNLVKVKVKKCRAVTTEGADWLRARREYVVVNLDSGEAEHQDASDGGVQENGIEFPPQM----VQPSVASSR---NTRSTSFKTRLGLLSGRSLVACT 793 KTPEC+N GL VAERCKLLRKLHIDGW+ NRIGDEGL++VAK C NLQELVLIGVN T +SL +ASNC+ LERLALCGS T+GD EI+CIA KC AL+K CIK CPVSD G+EALA GCPNLVK+KVKKC+ VT E DWLR +R +VV++D E E DG V E +E P + + SS +R +++LG L+GR+LV CT Sbjct: 296 KTPECSNFGLIYVAERCKLLRKLHIDGWRTNRIGDEGLLSVAKHCLNLQELVLIGVNATHMSLAAIASNCEKLERLALCGSGTIGDTEIACIARKCGALRKFCIKGCPVSDRGIEALAVGCPNLVKLKVKKCKVVTGEIGDWLREQRRTLVVSMDGDETEAVVVVDGEV-ETVVEEPRVAQAGGIVAEIGSSNGGGGSRLAMIRSKLGFLAGRNLVTCT 513
BLAST of CN187827 vs. ExPASy Swiss-Prot
Match: FBL16_ARATH (F-box/LRR-repeat protein 16 OS=Arabidopsis thaliana GN=FBL16 PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 6.208e-64 Identity = 130/221 (58.82%), Postives = 156/221 (70.59%), Query Frame = -2 Query: 155 KTPECTNLGLAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVSDHGMEALAGGCPNLVKVKVKKCRAVTTEGADWLRARREYVVVNLDSGEAEHQDASDGG---VQENGI--EFPPQMVQP---SVASSRNTRSTSFKTRLGLLSGRSLVACTL 793 KTP+C+NLGLA+V ERCKLLRKLHIDGW+ RIGD+GL++VAK C NLQELVLIGV+ T +SL +ASNC+ LERLALCGS T+GD EI CIA KCV L+K CIK C +SD G++ALA GCP LVK+KVKKC VT E +WLR RR +VV++D E DGG V E + E PP + VA KT+LGLL+GR+LVACTL Sbjct: 290 KTPDCSNLGLASVVERCKLLRKLHIDGWRVKRIGDQGLMSVAKHCLNLQELVLIGVDATYMSLSAIASNCKKLERLALCGSGTIGDAEIGCIAEKCVTLRKFCIKGCLISDVGVQALALGCPKLVKLKVKKCSLVTGEVREWLRERRMTLVVSMDDDETNGVGLVDGGDQRVLETVVEEEAPPVIDGDGGLGVAGGGRLGLAILKTKLGLLAGRNLVACTL 510
BLAST of CN187827 vs. ExPASy Swiss-Prot
Match: FBL4_ARATH (F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.645e-14 Identity = 52/137 (37.96%), Postives = 72/137 (52.55%), Query Frame = -2 Query: 371 TNLGLAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCP-VSDHGMEALAGGCPNLVKVKVKKCRAVTTEGAD 778 T+L L AV CKLL L++D + I D+GLIAVA+ C L+ L L V+ T V+ + C +LERLAL D + I LK L + C VS G+EA+A GC L +V++ C + T G + Sbjct: 232 TDLSLEAVGSHCKLLEVLYLD---SEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIE 365 HSP 2 Score: 70.8626 bits (172), Expect = 9.406e-12 Identity = 43/129 (33.33%), Postives = 70/129 (54.26%), Query Frame = -2 Query: 389 GLAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVS-LEVLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSC-PVSDHGMEALAGGCPNLVKVKVKKCRAV 769 GL A+A CK L ++ I+G + IG G+ A+ K CP L+EL L+ S L+ + C++LE L L +GD+ + IA C LKKL I+ C + + G+ ++ C +L ++ ++ C V Sbjct: 337 GLEAIAHGCKELERVEING--CHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKV 463 The following BLAST results are available for this feature:
BLAST of CN187827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187827 ID=CN187827; Name=CN187827; organism=Citrus sinensis; type=EST; length=794bpback to top |