CN187806

Overview
NameCN187806
Unique NameCN187806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7453 contig Csv1_Contig7453:590..1048. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.219e-13
Identity = 35/81 (43.21%), Postives = 54/81 (66.67%), Query Frame = -1
Query:  214 CYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 456
            CY++L + GK+I+V+SLIP   E ++ S +V+ LD        G KER+ E+ +ALA+K GF+ V ++C  Y  W++ELYK
Sbjct:  284 CYESLAKGGKIILVESLIPVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.219e-13
Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCYDALP+ GKVI+ + ++PE+ +T + ++ V  +D+ M    PG KERT +E + LA  AGF      C  Y+ W++EL K
Sbjct:  280 NCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.592e-13
Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCY+ALP  GKV+V + ++PE+ +T   ++    +DI M    PG KERT +E +ALA  AGFT  +  C  Y  W++E +K
Sbjct:  278 NCYEALPANGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.546e-13
Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCY ALP+ GKVI+ + ++PE+ +T + ++ V  +D+ M    PG KERT +E +ALA  AGF   + VC   + W++EL K
Sbjct:  269 NCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFRKVCSAVNTWIMELCK 350          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.049e-13
Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = -1
Query:  214 CYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 456
            CY+ALPE GKVI+ + ++PE+ +T + ++ V  +D+ M    PG KERT +E + LA  +GF     VC  Y+ W++EL K
Sbjct:  281 CYEALPENGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQVLAKASGFKQFNKVCCAYNSWIMELLK 361          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.032e-12
Identity = 34/82 (41.46%), Postives = 54/82 (65.85%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCY++LPE GKVI+ + ++PE+ ++ + ++ V  +D  M    PG KERT +E +ALA  +GF  +K+VC  +   L+EL K
Sbjct:  280 NCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.348e-12
Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NC++ALPE GKVI+ + L+PE+ ++ + ++    +D+ M    PG KERT +E +ALA  AGF     VC  Y+ W++EL K
Sbjct:  282 NCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.688e-12
Identity = 33/82 (40.24%), Postives = 53/82 (64.63%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCYDALPE GKVI+V+ ++P + +T + ++ V  +D+ M    PG KERT +E + LA  AGF   +++C  ++  ++E  K
Sbjct:  282 NCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.734e-12
Identity = 33/82 (40.24%), Postives = 53/82 (64.63%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCYDALPE GKVI+V+ ++P + +T + ++ V  +D+ M    PG KERT +E + LA  AGF   +++C  ++  ++E  K
Sbjct:  282 NCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.141e-11
Identity = 33/82 (40.24%), Postives = 53/82 (64.63%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCYDALPE GKVI+V+ ++P + +T + ++ V  +D+ M    PG KERT  E ++LA  AGF   +++C  ++  ++E  K
Sbjct:  281 NCYDALPENGKVILVECILPVAPDTSLATKGVMHVDVIMLAHNPGGKERTDREFESLARGAGFKGFEVMCCAFNTHVIEFRK 362          
The following BLAST results are available for this feature:
BLAST of CN187806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
IMT1_MESCR1.219e-1343.21Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_OCIBA1.219e-1342.68Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_CAPAN1.592e-1342.68Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_COFCA3.546e-1342.68Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT2_OCIBA6.049e-1341.98Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
OMT1_ARATH1.032e-1241.46Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_CATRO1.348e-1242.68Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_POPKI6.688e-1240.24Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM8.734e-1240.24Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT2_POPTM1.141e-1140.24Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005A14_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005A14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187806 ID=CN187806; Name=CN187806; organism=Citrus sinensis; type=EST; length=459bp
AATAGGAGTTGAAGGTAGCCAAACAGCCAGGATTATCCAACCTACGATTT
TATTAAGTTACTTTTGCACGCAAGCATTAAGAAGAGTCACTGAAACATGA
CAAGAAATAGAAGCCGATGCTGGCAAAATAATTAGGACTGGCGTCGGCAT
TTTATTTTATTTAATTAAATTAGAACCTTTAAATGACCTGTACGCTTGTC
AAAGCTCGGATCATTTGTAGAGTTCAACAAGCCAACAGCTGTAACCACGA
CAGACAAGTTTAACAGCTGTAAATCCAGCTTTTGTCGCCAGAGCCTTCAA
CTCCTCTACTGTCCTCTCCTTTGCCCCAGGAAATATAGTGTACATTTGTA
TGTCAAGCAGATAAACAAGCCTGCTTAAAATATCAGTCTCAAGGGACTCT
GGTATTAAAGAGTCTACCACAATGACCTTCCCGAATTCTGGAAGAGCATC
GTAGCAATT
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