CN187804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187804 vs. ExPASy Swiss-Prot
Match: NDUV2_ARATH (NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana GN=At4g02580 PE=1 SV=3) HSP 1 Score: 206.838 bits (525), Expect = 1.106e-52 Identity = 98/114 (85.96%), Postives = 103/114 (90.35%), Query Frame = -2 Query: 456 EIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKLPPGTQNPKRIKSGPEGGNTTLLSEPKPPPCRDLDAC 797 +IE ALL HLGVKR EVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNY+EDVTP++VVEIVE LR+GEK P GTQNPKRIK GPEGGN TLL EPKPP RDLDAC Sbjct: 142 DIESALLDHLGVKRGEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYFEDVTPEKVVEIVEKLRKGEKPPHGTQNPKRIKCGPEGGNKTLLGEPKPPQFRDLDAC 255
BLAST of CN187804 vs. ExPASy Swiss-Prot
Match: NDUV2_BOVIN (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Bos taurus GN=NDUFV2 PE=1 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.412e-15 Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = -2 Query: 480 IEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKLPPGTQNPKRIKSGPEGGNTTLLSEPKPP 794 I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED+TPK + EI++ L+ G+ PG ++ R P GG T+L PK P Sbjct: 148 ILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYEDLTPKDIEEIIDELKAGKIPKPGPRS-GRFSCEPAGGLTSLTEPPKGP 241
BLAST of CN187804 vs. ExPASy Swiss-Prot
Match: NDUV2_MOUSE (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Mus musculus GN=Ndufv2 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15 Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = -2 Query: 480 IEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKLPPGTQNPKRIKSGPEGGNTTLLSEPKPP 794 I + L + LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED+TPK + EI++ L+ G+ PG ++ R P GG T+L PK P Sbjct: 147 ILETLQRKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYEDLTPKDIEEIIDELKAGKVPKPGPRS-GRFCCEPAGGLTSLTEPPKGP 240
BLAST of CN187804 vs. ExPASy Swiss-Prot
Match: NDUV2_PONPY (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Pongo pygmaeus GN=NDUFV2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14 Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = -2 Query: 480 IEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKLPPGTQNPKRIKSGPEGGNTTLLSEPKPP 794 I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED+T K + EI++ L+ G+ PG ++ R P GG T+L PK P Sbjct: 148 ILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYEDLTAKDIEEIIDELKAGKIPKPGPRS-GRFSCEPAGGLTSLTEPPKGP 241
BLAST of CN187804 vs. ExPASy Swiss-Prot
Match: NDUV2_PANTR (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Pan troglodytes GN=NDUFV2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14 Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = -2 Query: 480 IEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKLPPGTQNPKRIKSGPEGGNTTLLSEPKPP 794 I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED+T K + EI++ L+ G+ PG ++ R P GG T+L PK P Sbjct: 148 ILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYEDLTAKDIEEIIDELKAGKIPKPGPRS-GRFSCEPAGGLTSLTEPPKGP 241
BLAST of CN187804 vs. ExPASy Swiss-Prot
Match: NDUV2_HUMAN (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Homo sapiens GN=NDUFV2 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14 Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = -2 Query: 480 IEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKLPPGTQNPKRIKSGPEGGNTTLLSEPKPP 794 I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED+T K + EI++ L+ G+ PG ++ R P GG T+L PK P Sbjct: 148 ILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYEDLTAKDIEEIIDELKAGKIPKPGPRS-GRFSCEPAGGLTSLTEPPKGP 241
BLAST of CN187804 vs. ExPASy Swiss-Prot
Match: NDUV2_GORGO (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFV2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14 Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = -2 Query: 480 IEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKLPPGTQNPKRIKSGPEGGNTTLLSEPKPP 794 I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED+T K + EI++ L+ G+ PG ++ R P GG T+L PK P Sbjct: 148 ILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYEDLTAKDIEEIIDELKAGKIPKPGPRS-GRFSCEPAGGLTSLTEPPKGP 241
BLAST of CN187804 vs. ExPASy Swiss-Prot
Match: NDUV2_RAT (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus GN=Ndufv2 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.561e-14 Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = -2 Query: 480 IEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKLPPGTQNPKRIKSGPEGGNTTLLSEPKPP 794 I + L + LG+K E T D LF++ E+EC+G CVNAPM+ + D +YYED+TPK + EI++ LR G+ PG ++ R P GG T+L PK P Sbjct: 147 ILETLQRKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------DYYEDLTPKDIEEIIDELRAGKVPKPGPRS-GRFCCEPAGGLTSLTEPPKGP 240
BLAST of CN187804 vs. ExPASy Swiss-Prot
Match: NDUV2_CAEEL (Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Caenorhabditis elegans GN=F53F4.10 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.746e-14 Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = -2 Query: 480 IEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKLPPGTQNPKRIKSGPEGGNTTLLSEPKPP 794 I + + K LG+ E TKDGLF++ E+EC+G CVNAPMI + D +Y+ED+TPK V EI++ L+ G K P R+ + P G T+L P P Sbjct: 137 ITETIEKKLGIHAGETTKDGLFTLAEVECLGACVNAPMIQIND----------DYFEDLTPKDVNEILDDLKAGRK-PAAGPRSGRLAAEPFGELTSLKETPPGP 230
BLAST of CN187804 vs. ExPASy Swiss-Prot
Match: NDUV2_DICDI (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Dictyostelium discoideum GN=ndufv2 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.944e-13 Identity = 38/110 (34.55%), Postives = 59/110 (53.64%), Query Frame = -2 Query: 468 EIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKLPPGTQNPKRIKSGPEGGNTTLLSEPKPPPCRD 797 EI HLG++ E T D F++ E+EC+G CVNAPM+ + D ++YED+T + +++ ++ + G Q ++ GP+ G TTLL P P CRD Sbjct: 147 EIIKTCKSHLGIQVGETTPDNKFTLVEVECLGACVNAPMMCIND----------DFYEDLTSASTINLLDQIKNNKPTKIGPQTHRKAAEGPQ-GKTTLLEPPVGPTCRD 245 The following BLAST results are available for this feature:
BLAST of CN187804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187804 ID=CN187804; Name=CN187804; organism=Citrus sinensis; type=EST; length=798bpback to top |