CK938641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938641 vs. ExPASy Swiss-Prot
Match: VATG_CITLI (V-type proton ATPase subunit G OS=Citrus limon GN=VATG PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.337e-33 Identity = 78/110 (70.91%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 83 MASNRGHGGIXXXXXXXXXXXHIVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTTVKN 412 M SNRG GGI HIVAAARNAKMARL QVEREFQRKLAES GDSGANVKRLEQETEVKIHHL AGAEKIQYDVVQM LKHVTTVKN Sbjct: 1 MTSNRGQGGIQQLLAAEQEAQHIVAAARNAKMARLKQAKEEAEREIAEYRAQVEREFQRKLAESVGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMFLKHVTTVKN 110
BLAST of CK938641 vs. ExPASy Swiss-Prot
Match: VAGT1_ARATH (V-type proton ATPase subunit G1 OS=Arabidopsis thaliana GN=VHA-G1 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.649e-23 Identity = 61/110 (55.45%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 83 MASNRGHGGIXXXXXXXXXXXHIVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTTVKN 412 M SNRG G I HIV AAR AKMARL Q E++FQRKL E+SGDSGANVKRLEQET+ KI L A +I DVV+MLLKHVTTVKN Sbjct: 1 MESNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRKLEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110
BLAST of CK938641 vs. ExPASy Swiss-Prot
Match: VATG1_TOBAC (V-type proton ATPase subunit G 1 OS=Nicotiana tabacum GN=VATG1 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.883e-22 Identity = 58/110 (52.73%), Postives = 66/110 (60.00%), Query Frame = 2 Query: 83 MASNRGHGGIXXXXXXXXXXXHIVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTTVKN 412 MAS+ G GI HIV AR AK ARL +E EFQRKL ++SGDSGANVKRLEQET+ KI HL AE++ DVVQMLL+HVTTVKN Sbjct: 1 MASSSGQNGIQLLLAAEQEAQHIVNNARTAKQARLKQAKEEAEKEIAEFRAYMEAEFQRKLEQTSGDSGANVKRLEQETDAKIEHLKTEAERVSPDVVQMLLRHVTTVKN 110
BLAST of CK938641 vs. ExPASy Swiss-Prot
Match: VATG2_TOBAC (V-type proton ATPase subunit G 2 OS=Nicotiana tabacum GN=VATG2 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.197e-19 Identity = 56/111 (50.45%), Postives = 63/111 (56.76%), Query Frame = 2 Query: 83 MASNRG-HGGIXXXXXXXXXXXHIVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTTVKN 412 M SNRG GI HIV AAR K AR+ +E EFQR + ++SGDSGANVKRLEQET KI HL AE I +DVVQMLL+ VTTVKN Sbjct: 1 MESNRGSQNGIQLLLGAEQEAQHIVNAARTGKQARMKQAKEEAEKEIAEFRAYMEAEFQRNVEQTSGDSGANVKRLEQETFAKIQHLKTEAESISHDVVQMLLRQVTTVKN 111
BLAST of CK938641 vs. ExPASy Swiss-Prot
Match: VATG2_ARATH (V-type proton ATPase subunit G2 OS=Arabidopsis thaliana GN=VHA-G2 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.642e-15 Identity = 48/88 (54.55%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 149 IVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTTVKN 412 IV AAR AKM RL E+ FQRKL +SGDSGANVKRLEQET+ KI L A +I DVV MLLK+VTTV N Sbjct: 19 IVNAARTAKMTRLKQAKEEAETEVAEHKTSTEQGFQRKLEATSGDSGANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106 The following BLAST results are available for this feature:
BLAST of CK938641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938641 ID=CK938641; Name=CK938641; organism=Citrus sinensis; type=EST; length=640bpback to top |