CK938632

Overview
NameCK938632
Unique NameCK938632
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.051e-73
Identity = 131/156 (83.97%), Postives = 140/156 (89.74%), Query Frame = 3
Query:  111 VLGSLMAAS-AGNFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            +L S M  S + NF +D +ITWGDGR ++ NNGDLLTLSL KASGSGFQSKNEYL+GKIDMQ+KLV GNSAGTVTAYYLKSPGSTWDEIDFEFLGN SGDPYTLHTNVFT GKGDREQQF  WFDPT+DFHTYSILWNPQRIIFSVDGTPIREFKN
Sbjct:   13 LLASFMICSVSANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKN 168          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.088e-70
Identity = 125/166 (75.30%), Postives = 145/166 (87.35%), Query Frame = 3
Query:   78 MSMASMLHLFLVLGSLMAASAGNFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            M++  +L LFL L    + SA NF +D +ITWGDGR ++ NNG+LLTLSL K+SGSGFQSKNEYL+GK+ MQ+KLVPGNSAGTVT  YLKSPG+TWDEIDFEFLGNSSG+PYTLHTNV+T GKGD+EQQF  WFDPTA+FHTY+ILWNPQRIIF+VDGTPIREFKN
Sbjct:    1 MAITYLLPLFLSLIITSSVSA-NFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKN 165          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 1.571e-69
Identity = 118/146 (80.82%), Postives = 130/146 (89.04%), Query Frame = 3
Query:  138 AGNFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            AG F  +FDITWGDGR K+LNNG+LLTLSL +ASGSGFQ+K EYL+GKIDMQLKLVPGNSAGTVTAYYLKS G TWDEIDFEFLGN +GDPYT+HTNV+T GKGDREQQFH WFDPTADFHTYS+LWNP  I+F VD  P+REFKN
Sbjct:   27 AGTFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTWDEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKN 172          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 7.795e-69
Identity = 121/166 (72.89%), Postives = 138/166 (83.13%), Query Frame = 3
Query:   78 MSMASMLHLFLVLGSLMAASAGNFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            MS   +     +L +  + SA +F  D ++ WG+GR K+LNNG LLTLSL K+SGSGFQSK EYL+GKIDMQ+KLVPGNSAGTVT +YLKS GSTWDEIDFEFLGN SGDPYTLHTNV+T GKGD+EQQFH WFDPTA+FHTYSILWNPQRII +VD TPIREFKN
Sbjct:    1 MSPFKIFFFTTLLVAAFSVSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKN 166          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 1.797e-65
Identity = 117/162 (72.22%), Postives = 132/162 (81.48%), Query Frame = 3
Query:   93 MLHLFLVLGS-LMAASAGNFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            +L L L +G  ++AASAGNFY+ FDITWG+GRA +  NG LLT +L K SGSGFQSK EYL+GKIDM+LKLV GNSAGTVTAYYL S G+ WDEIDFEFLGN +G PYT+HTNVFT GKGDRE QF  WFDPTADFHTY++ WNP  IIF VDG PIR FKN
Sbjct:   11 LLSLLLAIGFFVVAASAGNFYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKGTAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKN 172          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.347e-65
Identity = 114/160 (71.25%), Postives = 129/160 (80.62%), Query Frame = 3
Query:   96 LHLFLVLGSLMAASAGNFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            + LFL L  L+     +F +D DITWGDGR  +LNNG LL L L ++SGSGFQSK EYLYGK+DMQ+KLVPGNSAGTVT +YLKS G TWDEIDFEFLGN SGDPY +HTNV+T GKGDREQQF+ WFDPTA FH YSILWNP  I+F +DG PIREFKN
Sbjct:   11 ISLFLGLSILLVVHGKDFNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKN 170          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 4.004e-65
Identity = 113/163 (69.33%), Postives = 134/163 (82.21%), Query Frame = 3
Query:   90 SMLHLFLVLGSLMAASAGNFYKDFDITWGDGRAKMLNN-GDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            + L +FL         AG+F+KD  I WGDGR K+L+N G+LL+LSL K SGSGFQS  E+LYGK+++Q+KLVPGNSAGTVT +YLKSPG+TWDEIDFEFLGN SG PYTLHTNV+T G GD+EQQFH WFDPT DFHTY I+WNPQR+IF++DG PIREFKN
Sbjct:   10 AFLIIFLFAAQYERVYAGSFHKDVQIHWGDGRGKILDNVGNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKN 172          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 4.427e-64
Identity = 115/167 (68.86%), Postives = 134/167 (80.24%), Query Frame = 3
Query:   78 MSMASMLHLFLVLGSLMAASAGNFYKDFDITWGDGRAKMLNN-GDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            M   + L LFL     ++  AG+F+KD  I WGDGR K+ +N G LL+LSL K+SGSGFQS  E+LYGK ++Q+KLVPGNSAGTVT +YLKSPG+TWDEIDFEFLGN SG PYTLHTNV+T G GD+EQQFH WFDPTA+FHTY I WNPQRIIF+VDG PIREF N
Sbjct:    1 MKSFTFLILFLFAAQSISVYAGSFHKDVKIHWGDGRGKIHDNQGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMN 167          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 9.861e-64
Identity = 115/162 (70.99%), Postives = 134/162 (82.72%), Query Frame = 3
Query:   90 SMLHLFLVLGSLMAASAGNFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            S+L L L+L  L++ SAG+FY +FDITWG+GRA ++ +G LLT +L K SGSGFQSK EYL+GKIDM++KLV GNSAGTVTAYYL S G TWDEIDFEFLGN +G PY LHTNVFT GKG+RE QF+ WFDPTADFHTY++LWNP  IIF VDG PIR FKN
Sbjct:    9 SLLLLSLLL--LISLSAGSFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKN 168          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 9.861e-64
Identity = 112/156 (71.79%), Postives = 130/156 (83.33%), Query Frame = 3
Query:  108 LVLGSLMAASAGNFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            +V+ +++A  AG+FY+DFD+TWG  RAK+ N G LL+LSL K SGSGF+SK EYL+G+IDMQLKLV GNSAGTVTAYYL S G T DEIDFEFLGN SGDPY LHTN+FT GKG+REQQF+ WFDPT +FHTYSI+W PQ IIF VD TPIR FKN
Sbjct:   19 IVVSTMVATCAGSFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKN 174          
The following BLAST results are available for this feature:
BLAST of CK938632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
XTH23_ARATH1.051e-7383.97Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH22_ARATH1.088e-7075.30Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH25_ARATH1.571e-6980.82Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH7.795e-6972.89Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH14_ARATH1.797e-6572.22Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH21_ARATH2.347e-6571.25Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH4.004e-6569.33Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH19_ARATH4.427e-6468.86Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH9.861e-6470.99Putative xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN9.861e-6471.79Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004440_C11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IF_C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938632 ID=CK938632; Name=CK938632; organism=Citrus sinensis; type=EST; length=576bp
GGGGATCGCTCCAGTTTCGAATTATCAACTTCTCTCTGTTCATTCAAACA
CTACTTGTACCTCGTTTGCTCAAGCATATGTCTATGGCTTCAATGTTGCA
TTTGTTTCTTGTGCTTGGCTCTTTGATGGCTGCCTCTGCTGGTAACTTCT
ACAAAGATTTTGACATCACCTGGGGAGATGGCCGTGCCAAGATGCTCAAC
AATGGCGACCTTCTTACTCTTTCCCTCCATAAAGCTTCTGGCTCAGGATT
CCAGTCCAAGAATGAGTATCTATATGGCAAGATTGACATGCAGCTCAAGC
TTGTCCCTGGCAACTCTGCTGGCACAGTCACTGCTTATTACCTAAAATCA
CCGGGATCAACATGGGATGAGATAGACTTTGAATTCCTGGGAAATTCAAG
TGGTGACCCTTACACTCTTCATACCAATGTATTTACAAATGGCAAAGGTG
ACAGAGAGCAACAATTTCACNNNTGGTTTGACCCCACTGCTGACTTTCAC
ACCTATTCTATCCTCTGGAATCCTCAGCGCATTATCTTCTCTGTTGATGG
CACCCCAATAAGAGAATTTAAGAACT
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