CK938627

Overview
NameCK938627
Unique NameCK938627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938627 vs. ExPASy Swiss-Prot
Match: YOJ9_CAEEL (UPF0424 protein ZK353.9 OS=Caenorhabditis elegans GN=ZK353.9 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.967e-25
Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 3
Query:   93 WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPKLLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVGNLQGVLEYQTRYSKISKCGQYH 476
            + +  +ID+ KV+ LNE+V G+ K VFK  E+R +   E++ES D D +LL  IPFT  V++  +SI+G  DG+ P+K+R+F +RE + F D   ++A QE DL  + QG+++Y     K SK G  H
Sbjct:   26 YDMVSYIDMEKVTTLNESVDGAGKKVFKVMEKR-DDRLEYVES-DCDHELLFNIPFTGHVRLTGLSIIGDEDGSHPAKIRLFKDREAMSFDDC-SIEADQEIDLKQDPQGLVDYPL---KASKFGNIH 147          

HSP 2 Score: 46.9802 bits (110), Expect = 1.967e-25
Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 1
Query:  451 KFQSVANITLHFPDNFGGDTTQIHYIGLKGEAAQLKRDVLATIVYELRPNPSDHKTK 621
            KF ++ N+++    NFG D T+I+YIGL+GE     R  +A   YE R    DHK +
Sbjct:  142 KFGNIHNLSILVDANFGEDETKIYYIGLRGEFQHEFRQRIAIATYESRAQLKDHKNE 198          
BLAST of CK938627 vs. ExPASy Swiss-Prot
Match: CA128_DANRE (UPF0424 protein C1orf128 homolog OS=Danio rerio GN=zgc:77241 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.645e-24
Identity = 46/122 (37.70%), Postives = 71/122 (58.20%), Query Frame = 3
Query:   93 WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPKLLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVGNLQGVLEYQTRYSKIS 458
            + LY+ ID+ K+  LNE+  G  K VFK W+QR + + + +ES D D +LL  IPFT  VK+K I I G  D + P+++R+F N   + F D    +  Q + L  + +  LEY T+ ++ S
Sbjct:   28 YELYRRIDIEKLQCLNESRDGDGKLVFKPWDQRTDRN-KFVES-DADEELLFNIPFTGSVKLKGIIISGEDDESHPAEIRLFKNIPQMSFDDT-SREPEQAFRLNRDPRAELEYPTKIARFS 146          

HSP 2 Score: 56.225 bits (134), Expect = 4.645e-24
Identity = 23/60 (38.33%), Postives = 39/60 (65.00%), Query Frame = 1
Query:  445 IPKFQSVANITLHFPDNFGGDTTQIHYIGLKGEAAQLKRDVLATIVYELRPNPSDHKTKS 624
            I +F +V ++++H   NFG ++T+++YIGL+GE  +  R  +    YE   NP+DHK +S
Sbjct:  142 IARFSNVEHLSIHVSRNFGAESTRVYYIGLRGEYTEAHRHEVTICNYEAAANPADHKVES 201          
BLAST of CK938627 vs. ExPASy Swiss-Prot
Match: U424_DICDI (UPF0424 protein OS=Dictyostelium discoideum GN=DDB_G0277951 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.783e-20
Identity = 49/131 (37.40%), Postives = 79/131 (60.31%), Query Frame = 3
Query:   93 WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPKLLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVGNLQGVLEYQTRYSKISKCGQYHITL 485
            +SL +++D   ++ LNE V GSV+ +FK+WE R +   +H   +  D +L++ IPF    +IKSI I+GG  G+SP+KM+ +IN   IDF +       QEW+L  + +G + Y T+ +K +     H+TL
Sbjct:   20 YSLNRYLDTGTITCLNEKVKGSVRHIFKSWEDRHDL--KHFVESCDDEELIINIPFGAVTQIKSIIIIGGDGGSSPNKMKAYINNSNIDFGNINSFACTQEWNLHEDFEGQIGYSTKPTKFNNIN--HLTL 146          
BLAST of CK938627 vs. ExPASy Swiss-Prot
Match: YN82_SCHPO (UPF0424 protein P35G2.02 OS=Schizosaccharomyces pombe GN=SPBP35G2.02 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 5.589e-17
Identity = 36/109 (33.03%), Postives = 56/109 (51.38%), Query Frame = 3
Query:   96 SLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPKLLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVGNLQG 422
            +LY  I    +  LNEAVP S K VFK W+ R + +   +  +D D +LL  +PF     +KSI +    + T+P    +F NR  +DF    D+QA + ++     +G
Sbjct:   23 TLYSCIRKESIVTLNEAVPDSGKLVFKPWDLRYDDTD--IVESDADDQLLFQVPFAGAATLKSILVRIFPNETAPHSFSLFPNRTDLDFDTIGDVQATETFEFPLTFEG 129          

HSP 2 Score: 44.669 bits (104), Expect = 5.589e-17
Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 1
Query:  454 FQSVANITLHFPDNFGGDT-TQIHYIGLKGEAAQLKRDVLATIVYELRPNPSDH 612
            +Q++ N+ + F  + G D  TQI YIGL+G     K D + TI YE  P PSDH
Sbjct:  142 YQNLQNLNIFFTKSDGSDDPTQIAYIGLRGSFVPFKGDPVVTI-YEATPRPSDH 194          
BLAST of CK938627 vs. ExPASy Swiss-Prot
Match: CA128_HUMAN (UPF0424 protein C1orf128 OS=Homo sapiens GN=C1orf128 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.443e-17
Identity = 53/131 (40.46%), Postives = 80/131 (61.07%), Query Frame = 3
Query:   93 WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPKLLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVGNLQGVLEYQTRYSKISKCGQYHITL 485
            + LY  IDL ++  LNE+  GS + VFK WE+R + S + +ES D D +LL  IPFT +VK+K I I+G  D + PS+MR++ N   + F D  + +  Q + L  +L G LEY T+ S+ S    YH+++
Sbjct:   29 YGLYLRIDLERLQCLNESREGSGRGVFKPWEERTDRS-KFVES-DADEELLFNIPFTGNVKLKGIIIMGEDDDSHPSEMRLYKNIPQMSFDDT-EREPDQTFSLNRDLTGELEYATKISRFSNV--YHLSI 154          
BLAST of CK938627 vs. ExPASy Swiss-Prot
Match: CA128_MOUSE (UPF0424 protein C1orf128 homolog OS=Mus musculus GN=Trp26 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 3
Query:   93 WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPKLLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVGNLQGVLEYQTRYSKISKCGQYHITL 485
            + LY  IDL ++  LNE+  GS + VFK WE+R + S + +ES D D +LL  IPFT +VK+K + I+G  D + PS+MR++ N   + F D  + +  Q + L  ++ G LEY T+ S+ S    YH+++
Sbjct:   29 YGLYLRIDLERLQCLNESREGSGRGVFKPWEERTDRS-KFVES-DADEELLFNIPFTGNVKLKGVIIMGEDDDSHPSEMRLYKNIPQMSFDDT-EREPEQTFSLNRDITGELEYATKISRFSNV--YHLSI 154          
BLAST of CK938627 vs. ExPASy Swiss-Prot
Match: CA128_XENLA (UPF0424 protein C1orf128 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.473e-16
Identity = 51/135 (37.78%), Postives = 79/135 (58.52%), Query Frame = 3
Query:   93 WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPKLLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVGNLQGVLEYQTRYSKISKCGQYHITLP*QF 497
            + L++ IDL K+  LNE+  GS +SVF+AWE+R N     +ES+D D +LL  IPFT +VK+K I ++G    T P+++R+F N   + F D    +A Q + L  ++ G LEY T+ ++ S      I +   F
Sbjct:   27 YGLFRKIDLDKLQCLNESREGSGRSVFRAWEER-NDRTRFVESDD-DEELLFNIPFTGNVKLKGIVLIGEDSDTHPAELRLFKNVPHMSFDDT-GREADQTFSLNIDVNGNLEYPTKIARFSNVSHLSIHISKNF 158          
BLAST of CK938627 vs. ExPASy Swiss-Prot
Match: U424_DROPS (UPF0424 protein GA19395 OS=Drosophila pseudoobscura pseudoobscura GN=GA19395 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16
Identity = 49/131 (37.40%), Postives = 76/131 (58.02%), Query Frame = 3
Query:   93 WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPKLLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVGNLQGVLEYQTRYSKISKCGQYHITL 485
            +SLY  ID   +  LNE   GS K+VFK +E R + S      +D D +LL  IPFT ++K+K I I G  D + P+K+++F NR  + F DA+ ++  QE++L  + +G +EY  +    S    +H+TL
Sbjct:   29 YSLYTKIDAENLECLNEETEGSGKTVFKPYESRQDMS--KFVQSDADEELLFNIPFTGNIKLKGIIICGANDDSHPNKVKIFKNRPKMTFDDAK-VKVDQEFELTRDPRGEIEYSPKVVNFSSV--HHLTL 154          
BLAST of CK938627 vs. ExPASy Swiss-Prot
Match: U424_DROME (UPF0424 protein CG6153 OS=Drosophila melanogaster GN=CG6153 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 51/135 (37.78%), Postives = 76/135 (56.30%), Query Frame = 3
Query:   93 WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPKLLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVGNLQGVLEYQTRYSKISKCGQYHITLP*QF 497
            +SLY  IDL  V  LNE   G  KSVFK +E+R + S +++ES D D +LL  IPFT ++K+K I I G  D + P+ +++F NR  + F DA+  +  QE+ L  + +G +EY  +    S      +  P  F
Sbjct:   29 YSLYTKIDLDNVECLNEETDGQGKSVFKPYEKRQDLS-KYVES-DADEELLFNIPFTGNIKLKGIIISGANDDSHPNMVKIFKNRPRMTFDDAR-AKPDQEFQLTRDARGEIEYSPKVVTFSSVHHLSLYFPSNF 160          
The following BLAST results are available for this feature:
BLAST of CK938627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
YOJ9_CAEEL1.967e-2541.41UPF0424 protein ZK353.9 OS=Caenorhabditis elegans ... [more]
CA128_DANRE4.645e-2437.70UPF0424 protein C1orf128 homolog OS=Danio rerio GN... [more]
U424_DICDI4.783e-2037.40UPF0424 protein OS=Dictyostelium discoideum GN=DDB... [more]
YN82_SCHPO5.589e-1733.03UPF0424 protein P35G2.02 OS=Schizosaccharomyces po... [more]
CA128_HUMAN8.443e-1740.46UPF0424 protein C1orf128 OS=Homo sapiens GN=C1orf1... [more]
CA128_MOUSE1.881e-1638.93UPF0424 protein C1orf128 homolog OS=Mus musculus G... [more]
CA128_XENLA5.473e-1637.78UPF0424 protein C1orf128 homolog OS=Xenopus laevis... [more]
U424_DROPS9.335e-1637.40UPF0424 protein GA19395 OS=Drosophila pseudoobscur... [more]
U424_DROME2.080e-1537.78UPF0424 protein CG6153 OS=Drosophila melanogaster ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004440_C05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IF_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938627 ID=CK938627; Name=CK938627; organism=Citrus sinensis; type=EST; length=732bp
GGGGGTGTTGTGGCGGTAACCGGGTTTAGAGGCGGAAGGGGATGGCGTGT
TTGCACGATCATAGCTGTGAAGATCACGATTGCTCTTCTGATTGGTCTCT
CTACAAACATATAGATCTTTCCAAGGTGTCTGCATTAAATGAGGCTGTTC
CAGGGAGTGTCAAGTCAGTTTTCAAAGCATGGGAGCAGCGTCTGAATTCT
TCTGGGGAACATTTGGAAAGCAATGATGGTGATCCAAAGTTACTTGTTTA
TATTCCATTTACTACAGATGTTAAGATCAAGAGCATTTCAATTGTTGGTG
GTGCTGATGGAACAAGTCCTTCGAAGATGAGAGTGTTCATCAATCGAGAG
GGTATTGACTTCTCAGATGCTCAGGATATGCAAGCTATTCAGGAATGGGA
TTTGGTTGGGAATTTGCAAGGAGTGTTAGAATACCAAACAAGGTATTCCA
AAATTTCAAAGTGTGGCCAATATCACATTACACTTCCCTGACAATTTTGG
TGGTGACACAACTCAGATACACTACATTGGCCTAAAAGGGGAAGCCGCCC
AGTTGAAGAGGGACGTCCTGGCAACAATTGTTTATGAGCTGAGGCCGAAT
CCCTCCGACCACAAAACAAAGTCTGAAAGCGGCGGTGGTCTTTCGCATGT
GGAGTGAACAATTTCATGTTCTCTATCAAAGTTTATCACTTTAATGTACT
TCCAAATTATAANNNAAGAACTATACAAGCTT
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