CK938606

Overview
NameCK938606
Unique NameCK938606
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938606 vs. ExPASy Swiss-Prot
Match: UPTG_MAIZE (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Zea mays GN=UPTG PE=1 SV=2)

HSP 1 Score: 478.019 bits (1229), Expect = 2.109e-134
Identity = 218/235 (92.77%), Postives = 228/235 (97.02%), Query Frame = 2
Query:    2 TIKVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPSTPSFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVICDHMGWGVKTGLPYIWHSKASNPFVNLKKEXXGIYW 706
            TIKVP+GFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYI+TIDDDCFVAKDPSGK+INALEQHIKNLLSPSTP FFNTLYDPYREGADFVRGYPFSLREG HTAVSHGLWLNIPDYDAPTQLVKP+ERN RYVDAV+T+PKGTLFPMCGMNLAFDR+LIGPAMYFGLMGDGQPIGRYDDMWAGWC+KVICDH+  GVKTGLPYIWHSKASNPFVNLKKE  GI+W
Sbjct:   58 TIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAHTAVSHGLWLNIPDYDAPTQLVKPKERNERYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFW 292          
BLAST of CK938606 vs. ExPASy Swiss-Prot
Match: UPTG2_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 2 OS=Solanum tuberosum GN=UPTG2 PE=1 SV=1)

HSP 1 Score: 476.478 bits (1225), Expect = 6.136e-134
Identity = 218/234 (93.16%), Postives = 226/234 (96.58%), Query Frame = 2
Query:    5 IKVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPSTPSFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVICDHMGWGVKTGLPYIWHSKASNPFVNLKKEXXGIYW 706
            I VP+GFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYI+TIDDDCFVAKDPSGK+INALEQHIKNLL PSTP FFNTLYDPYREGADFVRGYPFS+REG  TAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAV+T+PKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWC+KVICDH+G GVKTGLPYIWHSKASNPFVNLKKE  GIYW
Sbjct:   53 INVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYREGADFVRGYPFSMREGAATAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYW 286          
BLAST of CK938606 vs. ExPASy Swiss-Prot
Match: UPTG_PEA (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Pisum sativum GN=UPTG PE=1 SV=1)

HSP 1 Score: 472.241 bits (1214), Expect = 1.157e-132
Identity = 216/234 (92.31%), Postives = 227/234 (97.01%), Query Frame = 2
Query:    5 IKVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPSTPSFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVICDHMGWGVKTGLPYIWHSKASNPFVNLKKEXXGIYW 706
            IKVP+GFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYI+TIDDDCFVAKDP+G EINALEQHIKNLLSPSTP FFNTLYDPYREG DFVRGYPFSLREGV TAVSHGLWLNIPDYDAPTQLVKP ERNTR+VDAVLT+PKG+LFPMCGMNLAF+RELIGPAMYFGLMGDGQPIGRYDDMWAGWC+KVICDH+G+GVKTGLPYIWHSKASNPFVNLKKE  GI+W
Sbjct:   52 IKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINALEQHIKNLLSPSTPFFFNTLYDPYREGTDFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPHERNTRFVDAVLTIPKGSLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGYGVKTGLPYIWHSKASNPFVNLKKEYKGIFW 285          
BLAST of CK938606 vs. ExPASy Swiss-Prot
Match: UPTG1_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 1 OS=Solanum tuberosum GN=UPTG1 PE=1 SV=2)

HSP 1 Score: 471.47 bits (1212), Expect = 1.974e-132
Identity = 214/234 (91.45%), Postives = 225/234 (96.15%), Query Frame = 2
Query:    5 IKVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPSTPSFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVICDHMGWGVKTGLPYIWHSKASNPFVNLKKEXXGIYW 706
            IKVP+GFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYI+TIDDDCFVAKDPSGK+INALEQHIKNLL PSTP FFNTLYDPYR+GADFVRGYPFS+REG  TAVSHGLWLNIPDYDAPTQLVKP ERNTRYVDAV+T+PKGTLFPMCGMNLAFDR+LIGPAMYFGLMGDGQPIGRYDDMWAGWC KVICDH+G G+KTGLPYIWHSKASNPFVNLKKE  GI+W
Sbjct:   49 IKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYRDGADFVRGYPFSMREGAPTAVSHGLWLNIPDYDAPTQLVKPHERNTRYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDHLGLGIKTGLPYIWHSKASNPFVNLKKEYNGIFW 282          
BLAST of CK938606 vs. ExPASy Swiss-Prot
Match: UPTG_PHODC (Alpha-1,4-glucan-protein synthase [UDP-forming] (Fragments) OS=Phoenix dactylifera PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 2
Query:  590 KVICDHMGWGVKTGLPYIWHSKASNPFVNLK 682
            KVICDH+G GVKTGLPYIWHSKASNPFVNLK
Sbjct:   30 KVICDHLGLGVKTGLPYIWHSKASNPFVNLK 60          
The following BLAST results are available for this feature:
BLAST of CK938606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
UPTG_MAIZE2.109e-13492.77Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
UPTG2_SOLTU6.136e-13493.16Alpha-1,4-glucan-protein synthase [UDP-forming] 2 ... [more]
UPTG_PEA1.157e-13292.31Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
UPTG1_SOLTU1.974e-13291.45Alpha-1,4-glucan-protein synthase [UDP-forming] 1 ... [more]
UPTG_PHODC6.575e-1193.55Alpha-1,4-glucan-protein synthase [UDP-forming] (F... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004440_E04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938606 ID=CK938606; Name=CK938606; organism=Citrus sinensis; type=EST; length=707bp
GACCATCAAGGTCCCTGACGGCTTTGACTACGAGCTCTACAACAGAAACG
ACATCAACCGCATTCTGGGTCCTAAGGCTTCTTGCATTTCCTTCAAGGAC
TCTGCTTGTCGATGCTTTGGCTACATGGTCTCTAAGAAGAAATATATTTT
CACCATTGATGATGATTGCTTTGTTGCCAAAGATCCCTCTGGCAAAGAGA
TCAATGCACTCGAGCAGCACATAAAGAACCTGTTGTCACCATCCACTCCA
TCATTCTTCAACACCCTTTATGATCCATACAGGGAAGGTGCGGACTTTGT
CCGTGGATACCCTTTCAGTCTCCGTGAAGGTGTCCACACGGCTGTATCTC
ATGGCCTCTGGCTGAACATCCCTGACTATGATGCACCCACTCAGCTGGTC
AAGCCTCGTGAGAGAAACACCAGGTATGTGGACGCTGTTCTGACGGTTCC
TAAGGGAACCCTGTTCCCAATGTGCGGTATGAATCTGGCATTCGACCGTG
AGCTGATTGGACCGGCAATGTACTTTGGACTCATGGGTGATGGACAGCCA
ATAGGACGTTATGATGATATGTGGGCTGGCTGGTGCATGAAGGTAATATG
TGATCATATGGGATGGGGTGTGAAAACCGGTCTGCCTTACATATGGCACA
GCAAAGCTAGCAACCCATTTGTTAATCTGAAAAAGGAGTANNNAGGTATC
TACTGGC
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