CK938567

Overview
NameCK938567
Unique NameCK938567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3557 contig Csv1_Contig3557:332..1163. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938567 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1)

HSP 1 Score: 425.631 bits (1093), Expect = 1.636e-118
Identity = 213/228 (93.42%), Postives = 225/228 (98.68%), Query Frame = 1
Query:  100 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 783
            MARYDRAITVFSPDGHLFQVEYA+EAVRKGNAAVGVRGTDT+VLGVEKKST KLQDSRSVRKIV+LD+HIALACAGLKADARVL+N+ARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLI+GFDP+TGVPSLYQTDPSGTFSAWKANATGRNSNS REFLEKNYKETSGQET+KLAIRALLEVVESGGKNIEVAVMT+E GLKQL+EAEIDA+V
Sbjct:    1 MARYDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRKIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNYKETSGQETVKLAIRALLEVVESGGKNIEVAVMTKEHGLKQLEEAEIDAIV 228          
BLAST of CK938567 vs. ExPASy Swiss-Prot
Match: PSA7_CICAR (Proteasome subunit alpha type-7 OS=Cicer arietinum GN=PAD1 PE=2 SV=1)

HSP 1 Score: 423.705 bits (1088), Expect = 6.215e-118
Identity = 212/228 (92.98%), Postives = 224/228 (98.25%), Query Frame = 1
Query:  100 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 783
            MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTD +VLGVEKKST KLQD+RSVRKIV+LD+HIALACAGLKADARVLINRAR+ECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTG PSLYQTDPSGTFSAWKANATGRNSNS+REFLEKN+KETSGQET+KLAIRALLEVVESGGKNIEVAVMT+E GL+QL+EAEIDA+V
Sbjct:    1 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSTAKLQDTRSVRKIVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNFKETSGQETVKLAIRALLEVVESGGKNIEVAVMTKENGLRQLEEAEIDAIV 228          
BLAST of CK938567 vs. ExPASy Swiss-Prot
Match: PSA7B_ARATH (Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana GN=PAD2 PE=1 SV=2)

HSP 1 Score: 417.157 bits (1071), Expect = 5.818e-116
Identity = 213/229 (93.01%), Postives = 224/229 (97.82%), Query Frame = 1
Query:  100 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREK-GLKQLDEAEIDAMV 783
            MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDT+VL VEKKST KLQDSRS RKIVSLDNHIALACAGLKADARVLIN+ARIECQSHRLT+EDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPY+ +PSLYQTDPSGTFSAWKANATGRNSNS+REFLEKNYKE+SGQETIKLAIRALLEVVESGGKNIEVAVMTRE+ GL+QL+EAEIDA+V
Sbjct:    1 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESSGQETIKLAIRALLEVVESGGKNIEVAVMTREETGLRQLEEAEIDAIV 229          
BLAST of CK938567 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1)

HSP 1 Score: 414.075 bits (1063), Expect = 4.925e-115
Identity = 210/229 (91.70%), Postives = 222/229 (96.94%), Query Frame = 1
Query:  100 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKG-LKQLDEAEIDAMV 783
            MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDT+VL VEKKST KLQDSRS RKIVSLDNHIALACAGLKADARVLIN+ARIECQSHRLT+EDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT +P+LYQTDPSGTFSAWKANATGRNSNS+REFLEKNYKE++GQET+KLAIRALLEVVESGGKNIEVAVMTRE+G LKQL+E EID +V
Sbjct:    1 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESAGQETVKLAIRALLEVVESGGKNIEVAVMTREEGVLKQLEEEEIDIIV 229          
BLAST of CK938567 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSJ (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica GN=Os08g0548900 PE=2 SV=1)

HSP 1 Score: 413.69 bits (1062), Expect = 6.432e-115
Identity = 208/228 (91.23%), Postives = 219/228 (96.05%), Query Frame = 1
Query:  100 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 783
            MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDT+VLGVEKKST KLQDSRS+RKI SLD HIALACAGLKADARVLINRAR+ECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT  P+LYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK+TSG+ETIKLAIRALLEVVESGGKNIE+AVMT + GL++L+EAEID  V
Sbjct:    1 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSGKETIKLAIRALLEVVESGGKNIEIAVMTHKDGLRELEEAEIDEYV 228          
BLAST of CK938567 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSI (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica GN=OsI_029135 PE=2 SV=2)

HSP 1 Score: 413.69 bits (1062), Expect = 6.432e-115
Identity = 208/228 (91.23%), Postives = 219/228 (96.05%), Query Frame = 1
Query:  100 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 783
            MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDT+VLGVEKKST KLQDSRS+RKI SLD HIALACAGLKADARVLINRAR+ECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT  P+LYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK+TSG+ETIKLAIRALLEVVESGGKNIE+AVMT + GL++L+EAEID  V
Sbjct:    1 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSGKETIKLAIRALLEVVESGGKNIEIAVMTHKDGLRELEEAEIDEYV 228          
BLAST of CK938567 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSJ (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 8.400e-115
Identity = 209/228 (91.67%), Postives = 219/228 (96.05%), Query Frame = 1
Query:  100 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 783
            MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRG+DT+VLGVEKKST KLQDSRSVRKI SLD HIALACAGLKADARVLINRAR+ECQSHRLTVED VTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT  P+LYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG+ETIKLAIRALLEVVESGGKNIE+AVMT++ GL+QL+EAEID  V
Sbjct:    1 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVESGGKNIEIAVMTQKDGLRQLEEAEIDEYV 228          
BLAST of CK938567 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSI (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica GN=PAD1 PE=2 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 8.400e-115
Identity = 209/228 (91.67%), Postives = 219/228 (96.05%), Query Frame = 1
Query:  100 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 783
            MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRG+DT+VLGVEKKST KLQDSRSVRKI SLD HIALACAGLKADARVLINRAR+ECQSHRLTVED VTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT  P+LYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG+ETIKLAIRALLEVVESGGKNIE+AVMT++ GL+QL+EAEID  V
Sbjct:    1 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVESGGKNIEIAVMTQKDGLRQLEEAEIDEYV 228          
BLAST of CK938567 vs. ExPASy Swiss-Prot
Match: PSA7_DICDI (Proteasome subunit alpha type-7 OS=Dictyostelium discoideum GN=psmA7 PE=3 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.547e-87
Identity = 161/227 (70.93%), Postives = 195/227 (85.90%), Query Frame = 1
Query:  103 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 783
            ARYDRAITVFSPDGHLFQVEYA+EAVRKG  AVGVRG D IVLGVEKK+T KLQD+RS+RKIV LD+HI L  AGL AD+RVLI++A +ECQS+RLTVED  +VEYI+++IAG+QQ+YTQSGGVRPFG+STLIVGFD   G P+LYQTDPSG++S+WKA A GR+S S+ EFLEKNY + S +E+IKLA+RALLE+VESG KNIE+AV+  ++ +  LDE EID +V
Sbjct:    4 ARYDRAITVFSPDGHLFQVEYAMEAVRKGTVAVGVRGKDVIVLGVEKKATAKLQDARSIRKIVKLDDHICLTFAGLTADSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQRYTQSGGVRPFGISTLIVGFDT-DGTPNLYQTDPSGSYSSWKAAAIGRSSKSVGEFLEKNYTDVSEEESIKLAVRALLEIVESGNKNIEIAVIRNKQPIVLLDEQEIDKLV 229          
BLAST of CK938567 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 9.678e-87
Identity = 161/230 (70.00%), Postives = 192/230 (83.48%), Query Frame = 1
Query:  103 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 783
            ARYDRAITVFSPDGHLFQVEYA EAV+KG+ AVG+RG D +VLGVEKKS  KLQ+ R+VRKI +LD H+ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR++ ++REFLEKNY +    S  + IKLAI+ALLEVV+SGGKNIE+AV+ R + LK L+  EI+ +V
Sbjct:    3 ARYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKLQEERTVRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLEVVQSGGKNIELAVIRRNQPLKILESKEIETLV 231          
The following BLAST results are available for this feature:
BLAST of CK938567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
PSA7_SOLLC1.636e-11893.42Proteasome subunit alpha type-7 OS=Solanum lycoper... [more]
PSA7_CICAR6.215e-11892.98Proteasome subunit alpha type-7 OS=Cicer arietinum... [more]
PSA7B_ARATH5.818e-11693.01Proteasome subunit alpha type-7-B OS=Arabidopsis t... [more]
PSA7A_ARATH4.925e-11591.70Proteasome subunit alpha type-7-A OS=Arabidopsis t... [more]
PSA7A_ORYSJ6.432e-11591.23Proteasome subunit alpha type-7-A OS=Oryza sativa ... [more]
PSA7A_ORYSI6.432e-11591.23Proteasome subunit alpha type-7-A OS=Oryza sativa ... [more]
PSA7B_ORYSJ8.400e-11591.67Proteasome subunit alpha type-7-B OS=Oryza sativa ... [more]
PSA7B_ORYSI8.400e-11591.67Proteasome subunit alpha type-7-B OS=Oryza sativa ... [more]
PSA7_DICDI2.547e-8770.93Proteasome subunit alpha type-7 OS=Dictyostelium d... [more]
PSA7_CARAU9.678e-8770.00Proteasome subunit alpha type-7 OS=Carassius aurat... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004441_B07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938567 ID=CK938567; Name=CK938567; organism=Citrus sinensis; type=EST; length=832bp
AATAAGAAATAATTAATAAGCAGGAAAGAAGAAAAAGAAACTCAAGAATC
AGAGAGACGCAGAAATCGATCGAGAAGAGGAAAATCAGAGAGATTTGACA
TGGCGAGATACGATCGAGCAATCACTGTATTTTCACCGGATGGCCACCTG
TTCCAAGTGGAATACGCACTAGAGGCCGTACGCAAAGGCAACGCCGCCGT
CGGCGTGCGCGGCACCGACACCATCGTTCTTGGCGTCGAAAAGAAATCCA
CTGTCAAGCTTCAGGATTCTAGATCAGTGAGGAAGATTGTCAGCTTGGAT
AATCATATTGCATTGGCCTGTGCTGGACTTAAAGCAGATGCTCGTGTCCT
GATAAACAGGGCTCGAATAGAATGTCAGAGCCACAGGCTGACTGTTGAGG
ACCCAGTAACTGTTGAGTACATCACTCGATACATTGCAGGTCTCCAGCAG
AAGTACACACAAAGCGGTGGTGTGAGACCATTTGGTCTTTCTACTCTGAT
TGTGGGCTTTGATCCATACACTGGCGTGCCGTCACTATATCAGACAGATC
CTTCTGGGACATTTTCTGCCTGGAAAGCTAATGCAACTGGGAGAAACTCT
AATTCAATGAGGGAGTTTCTGGAGAAAAACTATAAGGAAACTTCCGGGCA
AGAAACTATAAAGCTTGCAATTCGGGCATTACTTGAGGTTGTTGAGAGTG
GGGGCAAAAACATAGAAGTTGCTGTGATGACAAGGGAGAAGGGTCTGAAG
CAGCTTGATGAAGCTGAAATTGATGCCATGGTAGCCGAGATTGAAGCAGA
GAAGGCCGCCGCTGAGGCTGCAAAGAAGGGAC
back to top