EY649567

Overview
NameEY649567
Unique NameEY649567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.345e-45
Identity = 90/117 (76.92%), Postives = 98/117 (83.76%), Query Frame = 1
Query:   91 MSKSNFKIXXXXXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            M+KS+FK                  YPDRIPVIVEKAE+SDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPP GA+MS++Y+EKKD+DGFLYVTYSGENTFG
Sbjct:    1 MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFG 117          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.332e-42
Identity = 86/117 (73.50%), Postives = 94/117 (80.34%), Query Frame = 1
Query:   91 MSKSNFKIXXXXXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            M++S+FK+                 YPDRIPVIVEKAERSDIP IDKKKYLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV N LPPT A+MS IY+E KDEDGFLY+TYSGENTFG
Sbjct:    1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.332e-42
Identity = 86/117 (73.50%), Postives = 94/117 (80.34%), Query Frame = 1
Query:   91 MSKSNFKIXXXXXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            M++S+FK+                 YPDRIPVIVEKAERSDIP IDKKKYLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV N LPPT A+MS IY+E KDEDGFLY+TYSGENTFG
Sbjct:    1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.273e-42
Identity = 83/92 (90.22%), Postives = 89/92 (96.74%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            Y DR+PVIVEK+E+SDIP IDKKKYLVPADLTVGQFVYVIRKRI+LSAEKAIFIFVDNVLPPTGA+MSTIYDE K+EDGFLYVTYSGENTFG
Sbjct:   26 YSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFG 117          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.273e-42
Identity = 80/92 (86.96%), Postives = 90/92 (97.83%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            YPDRIPVIVEKAE+S++P IDKKKYLVP+DLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTG +MS++Y++KKDEDGFLY+TYSGENTFG
Sbjct:   27 YPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.968e-42
Identity = 84/117 (71.79%), Postives = 93/117 (79.49%), Query Frame = 1
Query:   91 MSKSNFKIXXXXXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            M+ S+FK+                 YPDRIPVIVE+AERSD+P IDKKKYLVPADLTVGQFVYV+RKRIKLSAEKAIF+FV N LPPT A+MS IYDE KDEDGFLY+TYSGENTFG
Sbjct:    1 MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.924e-41
Identity = 85/117 (72.65%), Postives = 92/117 (78.63%), Query Frame = 1
Query:   91 MSKSNFKIXXXXXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            M+KS+FK+                 Y DRIPVIVEKAERSDIP IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N LPPT A+MS IY+E KDEDGFLY+TYSGENTFG
Sbjct:    1 MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.924e-41
Identity = 85/117 (72.65%), Postives = 92/117 (78.63%), Query Frame = 1
Query:   91 MSKSNFKIXXXXXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            M+KS+FK+                 Y DRIPVIVEKAERSDIP IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV N LPPT A+MS IY+E KDEDGFLY+TYSGENTFG
Sbjct:    1 MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.286e-41
Identity = 83/117 (70.94%), Postives = 92/117 (78.63%), Query Frame = 1
Query:   91 MSKSNFKIXXXXXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            M+KS+FKI                 YPDRIPVIVEKA +SD+P IDKKKYLVPADLTVGQFVYV+RKRIKL AEKAIF+FV N LPPT A+MS IY+E KDEDGFLY+TYSGENTFG
Sbjct:    1 MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8_PHYIN (Autophagy-related protein 8 OS=Phytophthora infestans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.778e-40
Identity = 79/92 (85.87%), Postives = 86/92 (93.48%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            YPDRIPVI EKA+RSDIP IDKKKYLVPADLTVGQFVYVIRKRIKLS EKAIFIF++NVLPPT A+MS IY+E+KD DGFLY+TYSGENTFG
Sbjct:   24 YPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115          
The following BLAST results are available for this feature:
BLAST of EY649567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8F_ARATH8.345e-4576.92Autophagy-related protein 8f OS=Arabidopsis thalia... [more]
ATG8C_ORYSJ1.332e-4273.50Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ORYSI1.332e-4273.50Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8G_ARATH2.273e-4290.22Autophagy-related protein 8g OS=Arabidopsis thalia... [more]
ATG8E_ARATH2.273e-4286.96Autophagy-related protein 8e OS=Arabidopsis thalia... [more]
ATG8C_ARATH2.968e-4271.79Autophagy-related protein 8c OS=Arabidopsis thalia... [more]
ATG8B_ORYSJ1.924e-4172.65Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8B_ORYSI1.924e-4172.65Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8A_ARATH4.286e-4170.94Autophagy-related protein 8a OS=Arabidopsis thalia... [more]
ATG8_PHYIN2.778e-4085.87Autophagy-related protein 8 OS=Phytophthora infest... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-A11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649567 ID=EY649567; Name=EY649567; organism=Citrus sinensis; type=EST; length=677bp
CCACGCGTCCGGGTTAATCCAATCTTCTTTAATCAGCAACTGCACGACGA
CGATAGCTTCATTGTATATTATATATGATAATTAACGACAATGAGTAAAA
GCAACTTCAAGATTGAGCATGAATTCGAGAAAAGGCGTGCTGAGGCGGAA
AGAATTAGGGAGAAATACCCAGATAGAATTCCGGTGATAGTGGAAAAGGC
TGAGAGAAGTGATATTCCTACAATTGACAAGAAAAAATATTTAGTCCCTG
CTGACTTAACAGTGGGTCAGTTTGTGTATGTGATACGGAAGAGAATTAAA
CTGAGCGCAGAAAAGGCAATCTTTATATTTGTGGACAATGTTCTCCCGCC
TACAGGAGCAATAATGTCTACCATATATGATGAAAAGAAGGATGAAGATG
GGTTTCTCTATGTTACTTACAGTGGTGAAAACACATTTGGATAGCATAAT
CTGCCGCTACCCTTTTTCCTCTACCAACGTTTCGTTTGTTAATCTACTCA
TCTTGAATTTAGTGTTTCTGTTTTCTGGCTTTGTGCCGGTCATAATCCGG
CTTCTTATTTACATGACCTTTTATGCTTGTATATAGCCGGTTCAAACTAT
GTGGTATCAGACTGATGATTGCGAATAATTTAAATTCGATGGAAGTGTGG
TATCAATCCCTCAAAAAAAAAAAAAAA
back to top