CK938547

Overview
NameCK938547
Unique NameCK938547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:260..783. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938547 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.727e-11
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 2
Query:    5 GSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 145
            GSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:   20 GSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
The following BLAST results are available for this feature:
BLAST of CK938547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MT3_CARPA2.727e-1161.70Metallothionein-like protein type 3 OS=Carica papa... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004441_D05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIF_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938547 ID=CK938547; Name=CK938547; organism=Citrus sinensis; type=EST; length=525bp
GGGGGGAAGCAGCTATGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTG
TCAGCACCGTTGTTGTCATGGACGTTCAGGCTGCTGAGGCTGAAGGTAAC
TGCAAGTGCGGCCCCACCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCA
CTAATAAGCAAACACATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTA
AATATTGTGGGGGTTAAGAATAATGTAAGGGTGATTAAAAAAAAAAAGAA
AAATTCTCTACTTCGTTTTTATGATGGTCTACTACTAGTGTGTGGAGTGA
TGTGCGTGTTGTGTCACCCATCACTCGTAATGTTTTGTGTTTCCTTCTTC
ATAATCATGTAATATATGGCCATGGCCATGACCGTGGCCTTGTGTGGTTT
AATTTTAATGTATTATTGTTAGTCTCAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAACCCCAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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