CK938536

Overview
NameCK938536
Unique NameCK938536
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2115 contig Csv1_Contig2115:1..783. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938536 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.861e-97
Identity = 164/218 (75.23%), Postives = 190/218 (87.16%), Query Frame = 2
Query:   71 DEVILLDFWASMFGIRVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAP-LLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKIRVE 721
            +EVILLDFW SMFG+R+RIALAEK +KYEYKE+DL NKSPLLL+MNP+HKKIPVLIHNGK +CES I V+YI+EVWKDKAP LLP DPY RAQARFW D+IDKK+YD  RK W TKGEEQEAAKK+FIE LK LEG LGDKP+FGG++FG+VD+ LI YY WFY+YETFG FS EAECPKF+AW KRC+QRE+VAK+LPD+ KV EFV VLR+K  +E
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGLE 221          
BLAST of CK938536 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 9.234e-97
Identity = 162/218 (74.31%), Postives = 191/218 (87.61%), Query Frame = 2
Query:   71 DEVILLDFWASMFGIRVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAP-LLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKIRVE 721
            +EVILLDFW SMFG+R+RIALAEK +KYEYK++DL NKSPLLL+MNP+HKKIPVLIHNGK +CES I V+YI+EVWKDKAP LLP DPY RAQARFW D+IDKK+YD  RK WATKGEEQEAAKK+FIE LK LEG LGD+P+FGG++FG+VD+ LI +Y WFY+YETFG FS EAECPKF+AW KRC+QRE+VAK+LPD+ KV EFV VLR+K  +E
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGLE 221          
BLAST of CK938536 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.693e-88
Identity = 144/216 (66.67%), Postives = 180/216 (83.33%), Query Frame = 2
Query:   65 MADEVILLDFWASMFGIRVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKI 712
            M+DEV+LLD WASM+G+R RIALAEKGV+YEYKE++L N+SPLLL+MNP+HKKIPVLIHNGK +CES+IIVQYIDEVW DK+PL+P DPY+R+QARFWVD+IDKK+YDT +K W +KGEE E  KKE I + K LE  L DKPF+G D FG+VDLCLI +  WFY+YET+G F +E ECPK +AWVKRC++RETV+  LPD KKV+  +  L++ +
Sbjct:    1 MSDEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKMEEECPKLMAWVKRCMERETVSNTLPDAKKVYGLIVELQKTL 216          
BLAST of CK938536 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 4.024e-84
Identity = 137/215 (63.72%), Postives = 176/215 (81.86%), Query Frame = 2
Query:   68 ADEVILLDFWASMFGIRVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKI 712
            ++ V+LLDFW S FG+R+RIALA KG+KYE KE++L +KSPLLL MNPVHKKIP+LIHN K++CES  I++YIDEVW DK PLLP DPY+R+QARFW D+IDKK+Y T R+ W+ KGE+QE AKKEFIE+LKTLEGELG+K +FGGDN G+VD+ L+P+  WFYSYET   FS+EAECPK + W K C++ E+V+K+LP   K++ FV  L+ K+
Sbjct:    3 SNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECPKLVVWAKTCMESESVSKSLPHPHKIYGFVLELKHKL 217          
BLAST of CK938536 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 6.648e-79
Identity = 132/215 (61.40%), Postives = 172/215 (80.00%), Query Frame = 2
Query:   68 ADEVILLDFWASMFGIRVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKI 712
            ++ V+LLDF  S FG+R+RIALA KG+KYE KE++L +KSPLLL MNPVHKKIP+LIHNGK +CES  I++YIDEVW +K PLLP DPYQR+QARFW ++ID K+Y T R+ W+ KGE+QE AKKEFIE+ KTLEGELG+K +FGGDN G+VD+ L+P+  WFYSYET   FS+EAEC K + W + C++ E V+K+LP   K+++FV  L+ K+
Sbjct:    3 SNNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECRKLVVW-QNCMENERVSKSLPHPHKIYDFVLELKHKL 216          
BLAST of CK938536 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.916e-63
Identity = 117/226 (51.77%), Postives = 156/226 (69.03%), Query Frame = 2
Query:   74 EVILLDFWASMFGIRVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLP-------YDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFF---GGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKIRVE 721
            E++LLDFW S FG R RIA+AEKG+++EY+E+DL NKS LLLR NPVH+KIPVL+H G+ V ES +I+QY+D+ +     LLP          Y RA ARFW D++D+K+YD   + W  KGE Q AA +E  E+L+TLE ELGD+ FF   GG   G+VD+ L+P+  WFYSYE  G FSVE   P+  AW +RC + ++V K LP  +KV++FV VL++K  VE
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGVE 231          
BLAST of CK938536 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 8.723e-63
Identity = 118/226 (52.21%), Postives = 158/226 (69.91%), Query Frame = 2
Query:   74 EVILLDFWASMFGIRVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLL-PYD------PYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFF---GGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKIRVE 721
            E++LLDFW S FG R RIA+AEKG+++EY+E+DL NKS LLLR NPVH+KIPVL+H G+ V ES +I+QY+D+ +     LL P +       Y RA ARFW D++D+K+YD   + W  KGE Q AA +E  E+L+TLE ELGD+ FF   GG   G+VD+ L+P+  WFYSYE  G FSVE   P+  AW +RC + ++VAK LP  +KV++FV VL++K  VE
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKKYGVE 231          
BLAST of CK938536 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.810e-42
Identity = 98/207 (47.34%), Postives = 126/207 (60.87%), Query Frame = 2
Query:   74 EVILLDFWASMFGIRVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYET-FGKFSVEAE-CPKFIAWVKRCLQRETVAKALPDEKKVFEF 688
            EV LL FW S F  RV  AL  KGVKYEY E+D  NKS LLL+ NPV+KK+PVLIHNGK + ES II++YIDE ++  + +LP DPY RA ARFW  F+D K+      T+  KGEEQE  K+E  E+LK L+ EL DK FF GD FG+ D+       W   +E  +G   V++E  P F  W    +    V ++LP   ++  F
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKVAAVV-NTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAF 207          
BLAST of CK938536 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.976e-42
Identity = 97/208 (46.63%), Postives = 128/208 (61.54%), Query Frame = 2
Query:   74 EVILLDFWASMFGIRVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLC--LIPYYCWFYSYETFGKFSVEAE-CPKFIAWVKRCLQRETVAKALPDEKKVFEF 688
            EV LL FW S F  RV  AL  KGVKYEY E+D  NKS LLL+ NP+HKK+PVLIHNGK + ES +I++YIDE ++  + +LP DPY RA ARFW  F+D K+     KT+  KGEEQE  K+E  E+LK L+ EL DK FF GD FG+ D+   L+ ++   +  E  G   V +E  P F  W    +    + ++LP   ++  F
Sbjct:    3 EVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-PAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFE-EASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAF 207          
BLAST of CK938536 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.502e-41
Identity = 97/207 (46.86%), Postives = 124/207 (59.90%), Query Frame = 2
Query:   74 EVILLDFWASMFGIRVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYET-FGKFSVEAE-CPKFIAWVKRCLQRETVAKALPDEKKVFEF 688
            EV LL FW S F  RV  AL  KGVKYEY E+D  NKS LLL+ NPVHKK+PVLIHNGK + ES +I++YIDE ++  + +LP DPY RA ARFW  F+  K+      T+  KGEEQE  K+E  E+LK L+ EL DK FF GD FG+ D+       W   +E  +G   V +E  P F  W    +    V ++LP   ++  F
Sbjct:    3 EVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPS-ILPKDPYDRALARFWSKFLGDKVAAVV-NTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAF 207          
The following BLAST results are available for this feature:
BLAST of CK938536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
GSTX4_TOBAC1.861e-9775.23Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC9.234e-9774.31Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX3_SOYBN2.693e-8866.67Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC4.024e-8463.72Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL6.648e-7961.40Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSJ3.916e-6351.77Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI8.723e-6352.21Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_TOBAC3.810e-4247.34Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC4.976e-4246.63Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC5.502e-4146.86Probable glutathione S-transferase OS=Nicotiana ta... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004441_E07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIF_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938536 ID=CK938536; Name=CK938536; organism=Citrus sinensis; type=EST; length=783bp
GGGGATATTCATCGTTTCATTTATTCACTCACTCGCCCTTAATTCTCAGT
AAGGTTCTGTGACAATGGCGGACGAAGTGATTCTATTGGATTTCTGGGCC
AGTATGTTTGGGATAAGGGTCAGGATTGCTCTGGCAGAGAAAGGCGTCAA
GTATGAGTACAAAGAACAGGACTTGTTCAACAAGAGCCCGCTGCTTCTGC
GGATGAATCCCGTCCACAAGAAGATCCCGGTTCTTATCCATAATGGCAAA
TCGGTCTGTGAGTCATCCATCATTGTTCAGTACATTGATGAAGTCTGGAA
GGACAAGGCTCCATTGCTTCCCTACGATCCTTACCAAAGAGCTCAAGCGA
GGTTCTGGGTCGATTTTATTGACAAGAAGATGTACGATACTTCGAGGAAG
ACATGGGCCACAAAGGGAGAAGAGCAGGAGGCAGCAAAGAAGGAGTTCAT
CGAAGTTCTGAAGACCTTGGAAGGGGAGCTTGGAGACAAGCCTTTTTTCG
GAGGAGACAACTTTGGGTATGTGGATTTGTGTTTGATCCCGTACTATTGT
TGGTTTTATTCGTATGAGACATTTGGAAAGTTCAGCGTTGAGGCTGAGTG
CCCCAAATTCATTGCTTGGGTGAAGAGATGCTTGCAGAGAGAGACTGTTG
CCAAGGCACTTCCTGATGAGAAAAAAGTGTTTGAATTTGTTTCAGTGTTG
AGGGAAAAAATTAGAGTTGAGTAAAGGGATATAGCTAGACGATGAGAGAA
GTCAAAGCAGCACAATCGNNCTGCCTGCTATTT
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