CK938535

Overview
NameCK938535
Unique NameCK938535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938535 vs. ExPASy Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 56/112 (50.00%), Postives = 68/112 (60.71%), Query Frame = 1
Query:  127 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQV---XXXXXXXLVEMGDRIESECSGSGGEPDCGDWWE 453
            + GVRKRRWG +VSEIR P +K+RIWLGSF   E AA+AYD AAF LKG  A LNFP     LPRP +C+ +DIQV          +++MGD          G  D  D+WE
Sbjct:   45 YHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEIEDLPRPSTCTPRDIQVAAAKAANAVKIIKMGD------DDVAGIDDGDDFWE 150          
BLAST of CK938535 vs. ExPASy Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.811e-21
Identity = 49/80 (61.25%), Postives = 60/80 (75.00%), Query Frame = 1
Query:  112 QNDTPFRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQ 351
            +N T +RGVR R WG +VSEIR P +K+RIWLG++ +AE AARA+D AA  +KGN   LNFP  +G LPRP SCS KDIQ
Sbjct:   66 KNPTSYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQ 145          
BLAST of CK938535 vs. ExPASy Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1
Query:  115 NDTPFRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQ 351
            N   +RG+R+R+WG +VSEIR PG+KTRIWLGS+ +AE AA AYD+AA +L+G    LNFP    + PRPES S + IQ
Sbjct:   16 NQLSYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELVDSFPRPESSSSEHIQ 94          
BLAST of CK938535 vs. ExPASy Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.923e-20
Identity = 48/76 (63.16%), Postives = 57/76 (75.00%), Query Frame = 1
Query:  127 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQV 354
            +RGVRKR WG +VSEIR P +K+RIWLG+F S E AARA+D AA  +KG  A LNFP  AG+ PRP S S +DIQV
Sbjct:   36 YRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQV 111          
BLAST of CK938535 vs. ExPASy Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.861e-19
Identity = 48/86 (55.81%), Postives = 58/86 (67.44%), Query Frame = 1
Query:  112 QND-----TPFRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQV 354
            QND     + +RGVRKR+WG +VSEIR PG K RIWLGSF + E AA AYD AAF+ +G  A LNFP  A +LPRP   S   I++
Sbjct:   14 QNDGKGVPSAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPELASSLPRPADSSSDSIRM 99          
BLAST of CK938535 vs. ExPASy Swiss-Prot
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.654e-19
Identity = 47/75 (62.67%), Postives = 55/75 (73.33%), Query Frame = 1
Query:  127 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQ 351
            FRGVR R+WG +VSEIR P +K+RIWLG+F +AE AARA+D AA  +KG  A LNFP  A  LPRP S   KDIQ
Sbjct:   45 FRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQ 119          
BLAST of CK938535 vs. ExPASy Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.654e-19
Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 1
Query:  112 QNDTPFRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQ 351
            ++D  +RGVR R WG +VSEIR P +K+RIWLG+F + E AARA+D+AA  +KG  A LNFP  A  LPRP S S +D+Q
Sbjct:   38 RSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQ 117          
BLAST of CK938535 vs. ExPASy Swiss-Prot
Match: ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.306e-18
Identity = 46/75 (61.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query:  127 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQ 351
            +RGVR R WG +VSEIR P +K+RIWLG++ +AE AARA+D AA  +KG  A LNFP  AG LPRP + S KDIQ
Sbjct:  100 YRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSPKDIQ 174          
BLAST of CK938535 vs. ExPASy Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.909e-18
Identity = 46/75 (61.33%), Postives = 54/75 (72.00%), Query Frame = 1
Query:  127 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQ 351
            FRGVR R+WG +VSEIR P +K+RIWLG+F + E AARA+D AA  +KG  A LNFP  A  LPRP S   KDIQ
Sbjct:   40 FRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQ 114          
BLAST of CK938535 vs. ExPASy Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.799e-18
Identity = 45/75 (60.00%), Postives = 56/75 (74.67%), Query Frame = 1
Query:  127 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQ 351
            +RG R R WG +VSEIR P +K+RIWLG+F +AE AARA+D AA  +KG+ A LNFP  A  LPRP S S++DIQ
Sbjct:   26 YRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQ 100          
The following BLAST results are available for this feature:
BLAST of CK938535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
ERF23_ARATH2.152e-2150.00Ethylene-responsive transcription factor ERF023 OS... [more]
ERF35_ARATH2.811e-2161.25Ethylene-responsive transcription factor ERF035 OS... [more]
ERF22_ARATH4.059e-2056.96Ethylene-responsive transcription factor ERF022 OS... [more]
TINY_ARATH6.923e-2063.16Ethylene-responsive transcription factor TINY OS=A... [more]
ERF21_ARATH5.861e-1955.81Ethylene-responsive transcription factor ERF021 OS... [more]
ERF38_ARATH7.654e-1962.67Ethylene-responsive transcription factor ERF038 OS... [more]
ERF37_ARATH7.654e-1956.25Ethylene-responsive transcription factor ERF037 OS... [more]
ERF34_ARATH1.306e-1861.33Ethylene-responsive transcription factor ERF034 OS... [more]
ERF39_ARATH2.909e-1861.33Ethylene-responsive transcription factor ERF039 OS... [more]
ERF42_ARATH3.799e-1860.00Ethylene-responsive transcription factor ERF042 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004441_E05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIF_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938535 ID=CK938535; Name=CK938535; organism=Citrus sinensis; type=EST; length=666bp
GGGGAGACAAACACTCTCTTCTTCATGTCTGTAACGACACAAACACAAGA
GCCTTCACAACTTCAACCCGGTTCGTCAACCTCCAAACCGGGTTCAAAGA
AAAGGACACGCCAAAACGACACGCCGTTTCGGGGAGTGCGTAAACGGAGG
TGGGGCAGCTACGTTTCGGAGATACGGTTGCCAGGTGAAAAGACCCGGAT
ATGGCTCGGGTCATTTGGGTCAGCCGAGAAGGCGGCTCGGGCTTATGACT
CTGCGGCTTTCTATTTAAAAGGCAACTTGGCGACTCTTAACTTTCCGGCC
TCGGCCGGCGCGCTTCCTCGACCGGAGTCTTGTTCGAGGAAAGACATACA
GGTAGCAGCCGCTAAAGCTGCGGCTCTTGTAGAGATGGGCGACCGGATTG
AGTCGGAATGCAGCGGTTCGGGTGGTGAACCGGACTGTGGAGATTGGTGG
GAAAGGGAAACGACGGCGTCTGATGAAGTGAAGGTGGCGCCATTGCTGAG
TCCACCCAGATTTGACTCGGACATTGGGGAGCTGTATTGTTGGATGGATG
ATGATAATTTTCTACTGGGGTCTTGTTTAGAATTGTAAAGGACTTTTTTT
TGTGTAAAATATTATAAATTTCAACAACTAAGAACTTTGCCTTTTCGNNN
NNNNNNNATNNNAAAA
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