CN187752

Overview
NameCN187752
Unique NameCN187752
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN187752_ssr50 microsatellite CN187752_ssr50:50..61. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2619 contig Csv1_Contig2619:1..814. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_SYNY3 (Acetylglutamate kinase OS=Synechocystis sp. (strain PCC 6803) GN=argB PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.096e-54
Identity = 115/183 (62.84%), Postives = 134/183 (73.22%), Query Frame = 2 
Query:  266 AEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            A  RV ILSE+LP+IQ F G+T+VVKYGGAAMK +   N                 RPV+VHGGGPEIN WL + GIEP F+DGLRVTDA TM+IV MVLVGRVNK LV+LIN+AG  AVGL G DG+L TAR   N   +GFVGEV+ VD  V+E LV SG+IPVI+SVAADEFGQ++NINA
Sbjct:   12 AATRVKILSEALPYIQHFAGRTVVVKYGGAAMKDS---NLKDKVIRDIVFMASVGIRPVVVHGGGPEINTWLDKVGIEPQFKDGLRVTDAATMDIVEMVLVGRVNKELVNLINQAGGKAVGLCGKDGQLMTARTMTNK-DVGFVGEVSSVDARVVETLVKSGYIPVISSVAADEFGQAHNINA 190
[Close]
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_MICAN (Acetylglutamate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=argB PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.096e-54
Identity = 113/181 (62.43%), Postives = 136/181 (75.14%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQ-KDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV ILSE+LP+IQ+FRG+T+VVKYGGAAM  +  KD                  RPV+VHGGGPEIN WL + GIEP F+DGLRVTDA+TM++V MVLVGRVNK +V+LIN+AG  AVGL G DG L TARP      +GFVGEV+ VD +V+E LVNSG+IPVI+SVAADE GQ++NINA
Sbjct:   12 RVKILSEALPYIQEFRGRTVVVKYGGAAMNNSDIKDTVMRDIVFLSCVGV----RPVIVHGGGPEINSWLDKLGIEPQFKDGLRVTDADTMDVVEMVLVGRVNKEIVALINQAGGKAVGLCGKDGNLITARPVGKEG-IGFVGEVSSVDTSVVESLVNSGYIPVISSVAADETGQAHNINA 187
[Close]
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_ACAM1 (Acetylglutamate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=argB PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.162e-53
Identity = 109/183 (59.56%), Postives = 131/183 (71.58%), Query Frame = 2 
Query:  266 AEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            A  RV +LSE+LP+IQ F G+T+VVKYGGAAMK +                     RPVLVHGGGPEIN WL++ GIEP F  GLRVTDA TM++V MVLVGRVNK LVSLIN+AG +AVG+ G DG+L TARP   S  +GFVGEVA V+P +I  L++ GHIP+++SVA DE GQ YNINA
Sbjct:    4 ASDRVQVLSEALPYIQSFAGRTVVVKYGGAAMKDS---TLKATVIRDVVFMACVGLRPVLVHGGGPEINLWLEKLGIEPQFMKGLRVTDAPTMDVVEMVLVGRVNKELVSLINQAGGSAVGVCGKDGKLLTARPQGESG-IGFVGEVASVNPQLIHNLLDGGHIPIVSSVATDEEGQVYNINA 182
[Close]
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_NOSP7 (Acetylglutamate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=argB PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.169e-51
Identity = 105/181 (58.01%), Postives = 134/181 (74.03%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQ-KDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV +LSE+LP+IQ+F G+T+VVKYGGAAMK +  KD                  RP++VHGGGPEIN WL + GIEP F++GLRVTDA TM++V MVLVGRVNK +V+LIN+AG  AVGL G DG LFTARP      +GFVGEV+ V+  +++ L ++G+IPV++SVAADE GQ+YNINA
Sbjct:   16 RVRVLSEALPYIQQFAGRTVVVKYGGAAMKDSTLKDKVIRDIVFLSCVGL----RPIVVHGGGPEINSWLDKLGIEPQFKNGLRVTDAATMDVVEMVLVGRVNKEIVALINQAGGLAVGLCGKDGNLFTARPQGQEG-IGFVGEVSNVNIKILDTLASNGYIPVVSSVAADETGQAYNINA 191
[Close]
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_SYNP6 (Acetylglutamate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=argB PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.241e-51
Identity = 108/180 (60.00%), Postives = 127/180 (70.56%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV ILSE+LP++Q+F G+T+VVKYGGAAMK   ++                  RPV+VHGGGPEIN WL R GIEP F +GLRVTDA+TME+V MVLVGRVNK +VS IN  G  AVG  G DGRL  ARP      +GFVGEV  V+  VIEPL+  G+IPVI+SVAADE GQS+NINA
Sbjct:   13 RVRILSEALPYLQQFAGRTVVVKYGGAAMK---QEELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDADTMEVVEMVLVGRVNKDIVSRINTTGGRAVGFCGTDGRLVLARPHDQEG-IGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINA 188
[Close]
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_SYNE7 (Acetylglutamate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=argB PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.241e-51
Identity = 108/180 (60.00%), Postives = 127/180 (70.56%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV ILSE+LP++Q+F G+T+VVKYGGAAMK   ++                  RPV+VHGGGPEIN WL R GIEP F +GLRVTDA+TME+V MVLVGRVNK +VS IN  G  AVG  G DGRL  ARP      +GFVGEV  V+  VIEPL+  G+IPVI+SVAADE GQS+NINA
Sbjct:   13 RVRILSEALPYLQQFAGRTVVVKYGGAAMK---QEELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDADTMEVVEMVLVGRVNKDIVSRINTTGGRAVGFCGTDGRLVLARPHDQEG-IGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINA 188
[Close]
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_ANAVT (Acetylglutamate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=argB PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.241e-51
Identity = 105/181 (58.01%), Postives = 132/181 (72.93%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQ-KDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV +LSE+LP+IQ+F G+T+VVKYGGAAMK +  KD                  RP+LVHGGGPEIN WL + GIE  F++GLRVTDA TM++V MVLVGRVNK +VSLIN+AG  AVGL G DG L TARP      +GFVGEV+ V+  ++E L ++G+IPV++SVAAD+ GQ+YNINA
Sbjct:   16 RVQVLSEALPYIQQFAGRTVVVKYGGAAMKDSHLKDQVIRDIVFLSCVGL----RPILVHGGGPEINSWLDKLGIEAQFKNGLRVTDAPTMDVVEMVLVGRVNKEIVSLINQAGGLAVGLCGKDGNLITARPQGQEG-IGFVGEVSNVNIKILETLASNGYIPVVSSVAADDSGQAYNINA 191
[Close]
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_ANASP (Acetylglutamate kinase OS=Anabaena sp. (strain PCC 7120) GN=argB PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.241e-51
Identity = 105/181 (58.01%), Postives = 132/181 (72.93%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQ-KDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV +LSE+LP+IQ+F G+T+VVKYGGAAMK +  KD                  RP+LVHGGGPEIN WL + GIE  F++GLRVTDA TM++V MVLVGRVNK +VSLIN+AG  AVGL G DG L TARP      +GFVGEV+ V+  ++E L ++G+IPV++SVAAD+ GQ+YNINA
Sbjct:   16 RVQVLSEALPYIQQFAGRTVVVKYGGAAMKDSHLKDQVIRDIVFLSCVGL----RPILVHGGGPEINSWLDKLGIEAQFKNGLRVTDAPTMDVVEMVLVGRVNKEIVSLINQAGGLAVGLCGKDGNLITARPQGQEG-IGFVGEVSNVNIKILETLASNGYIPVVSSVAADDSGQAYNINA 191
[Close]
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_TRIEI (Acetylglutamate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=argB PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.090e-50
Identity = 105/190 (55.26%), Postives = 134/190 (70.53%), Query Frame = 2 
Query:  248 TDTQTPAEF-RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            TD +  +E  RV +LSE+LP+IQKF G+ IVVKYGGAAM+ +   N                 RP++VHGGGPEIN WL + GIEP F+DGLRVTDA+TME+V MVLVG+VNK +VSLIN+AG  AVGL G D  L  ARP      +GFVGEV+ V   +++ LV++G+IPV++SVA DE GQ+YN+NA
Sbjct:    5 TDLKNESEMSRVKVLSEALPYIQKFTGRKIVVKYGGAAMRDS---NVKDQVMRDIVLLSCVGIRPIVVHGGGPEINSWLGKLGIEPQFKDGLRVTDASTMEVVEMVLVGKVNKEIVSLINQAGGCAVGLCGKDASLIQARPE-GIEGIGFVGEVSNVKIDILQSLVDNGYIPVVSSVATDEQGQAYNLNA 190
[Close]
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_PORYE (Acetylglutamate kinase OS=Porphyra yezoensis GN=argB PE=3 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.651e-49
Identity = 107/180 (59.44%), Postives = 127/180 (70.56%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV +LSE+LP+IQ+F  + IV+KYGGAAMK NQK                   RP+LVHGGGPEINFWL R  I P F DG+RVTD  TM+IV MVLVGRVNK LV+ INK G  +VGLSG DG L T RP+   A LGFVGEV  +D  +++ L+N+ +IPVIASVAAD+ GQSYNINA
Sbjct:    7 RVKVLSEALPYIQQFSSRIIVIKYGGAAMK-NQK--LKDQVISDLVFLSFIGLRPILVHGGGPEINFWLDRLKILPKFDDGVRVTDQPTMDIVEMVLVGRVNKDLVATINKQGGKSVGLSGKDGLLITPRPN-GKANLGFVGEVQNIDTKLLKILINNNYIPVIASVAADKEGQSYNINA 182
The following BLAST results are available for this feature:
BLAST of CN187752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_SYNY32.096e-5462.84Acetylglutamate kinase OS=Synechocystis sp. (strai... [more]
ARGB_MICAN2.096e-5462.43Acetylglutamate kinase OS=Microcystis aeruginosa (... [more]
ARGB_ACAM15.162e-5359.56Acetylglutamate kinase OS=Acaryochloris marina (st... [more]
ARGB_NOSP72.169e-5158.01Acetylglutamate kinase OS=Nostoc punctiforme (stra... [more]
ARGB_SYNP68.241e-5160.00Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]
ARGB_SYNE78.241e-5160.00Acetylglutamate kinase OS=Synechococcus elongatus ... [more]
ARGB_ANAVT8.241e-5158.01Acetylglutamate kinase OS=Anabaena variabilis (str... [more]
ARGB_ANASP8.241e-5158.01Acetylglutamate kinase OS=Anabaena sp. (strain PCC... [more]
ARGB_TRIEI4.090e-5055.26Acetylglutamate kinase OS=Trichodesmium erythraeum... [more]
ARGB_PORYE2.651e-4959.44Acetylglutamate kinase OS=Porphyra yezoensis GN=ar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187752 ID=CN187752; Name=CN187752; organism=Citrus sinensis; type=EST; length=814bp
ATGGAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGG
CCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGTCACAG
CTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCCGTCTT
CAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCGCACCG
AAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCGTAACT
GACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAATCTCT
TCCCTTCATTCAGAAATTCCGCGGAAAGACCATCGTCGTCAAATACGGCG
GCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCGTCGTA
AAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCGTCCTGTCTTGGTCCA
CGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAATCGAGC
CCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGGAGATC
GTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCTCTCAT
CAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGGGCGCC
TCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCGTTGGT
GAAGTAGCCCGCGTGGACCCCACGGTCATTGAGCCTCTGGTAAACAGTGG
ACACATACCAGTGATTGCTTCTGTGGCTGCGGATGAGTTTGGGCAATCTT
ATAACATCAATGCG
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