CN187743

Overview
NameCN187743
Unique NameCN187743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3096 contig Csv1_Contig3096:1002..1613. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 6.428e-51
Identity = 96/112 (85.71%), Postives = 106/112 (94.64%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A +TLTML+RRVPPAVPGIMFL GGQSE EATLNLNAMNQ+PNPWHVSFSYARALQN+VL+TWQG+PE  EA+QK+LLVRAKANSLAQLG YSAEGE+E+AKKGMFVKGYTY
Sbjct:  280 ADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQSPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGENEDAKKGMFVKGYTY 391          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.583e-49
Identity = 96/112 (85.71%), Postives = 100/112 (89.29%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A YTL +LR RVPPAVPGIMFL GGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNT LKTW GRPEN  AAQ +LL RAKANSLAQLG Y+ EGESEEAK+GMFVKGYTY
Sbjct:  287 AAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 398          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.135e-47
Identity = 92/112 (82.14%), Postives = 99/112 (88.39%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A YTL +LR R+PPAVPGIMFL GGQSE+EATLNLNAMNQAPNPWHVSFSYARALQNT LKTW G+ EN +AAQ  LL RAKANSLAQLG Y+ EGESEEAK+GMFVKGYTY
Sbjct:  288 ASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 399          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.650e-46
Identity = 88/112 (78.57%), Postives = 100/112 (89.29%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A+YTL +L RR+PPAVPGIMFL GGQSEVEATLNLNAMN++PNPWHVSFSYARALQNT LKTW G PEN +AAQ++LL RAK+NSLAQLG Y  +GESEEAKK +FVKGY+Y
Sbjct:  245 AEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 4.035e-45
Identity = 86/110 (78.18%), Postives = 97/110 (88.18%), Query Frame = -1
Query:  277 YTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 606
            YTL +L RR+PPAVPGIMFL GGQSEVEAT NLNAMNQ PNPWHVSFSYARALQNT LKTW G+PEN +AAQ +LL+RAKANSLAQLG Y+++GE+ EAK+GMFVK Y Y
Sbjct:  279 YTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 8.414e-43
Identity = 85/112 (75.89%), Postives = 97/112 (86.61%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A+YTL +L RR+PPAVPGIMFL GGQSEVEATLNLNAMN++PNPWHVSFSYARALQNT LKTW G PEN +AAQ++LL RAK+NSLAQLG Y  +GESEEAKK    +GY+Y
Sbjct:  239 AEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 5.467e-34
Identity = 76/108 (70.37%), Postives = 81/108 (75.00%), Query Frame = -1
Query:  289 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVK 612
            A Y L +L RR  P VPGIM L GGQSEVEATLNLNAMNQ+PNPWHVSFSYARALQNT LKTW    EN +A        AK+NSLAQLG Y+ EGESEE KK MFVK
Sbjct:  285 ADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWVEGQENVKAQD---FACAKSNSLAQLGKYTGEGESEERKKDMFVK 389          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.759e-32
Identity = 73/112 (65.18%), Postives = 83/112 (74.11%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A+YTL ML  R PP VPGIMFL GGQSE+E+TLNLNAMNQ+PNPWHVSFSYARAL NTVLKTWQ  P   +A + +   R KANS AQ G Y A  E +EA +GM+ KG  Y
Sbjct:  263 AEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQSPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTEGKEAAQGMYEKGKGY 372          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.104e-29
Identity = 63/112 (56.25%), Postives = 81/112 (72.32%), Query Frame = -1
Query:  277 KYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAPN-PWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 609
            K+T+  L+R VPPA+ G++FL GGQ+E+EAT NLNAMN  PN PW +SFSY RALQ +V+ TW+G   N EAA+K  L RAK NSLAQLG Y+ E  +  A + ++VK Y Y
Sbjct:  246 KFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPNRPWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTGSASESLYVKDYKY 357          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.304e-27
Identity = 63/114 (55.26%), Postives = 75/114 (65.79%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMN--QAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A+YT+  L+R VP AVPG+MFL GGQSE EATLNLNAMN  +   PW +SFSY RALQ + LK WQG+ EN   AQ+  L RAK NS A LG Y       +A + + VK Y Y
Sbjct:  244 AEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAGGADASESLHVKDYKY 357          
The following BLAST results are available for this feature:
BLAST of CN187743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALFC3_ARATH6.428e-5185.71Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC2_ARATH1.583e-4985.71Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_ARATH1.135e-4782.14Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC1_PEA3.650e-4678.57Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC_ORYSJ4.035e-4578.18Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC2_PEA8.414e-4375.89Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC_SPIOL5.467e-3470.37Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE1.759e-3265.18Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_DICDI3.104e-2956.25Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_SPIOL1.304e-2755.26Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187743 ID=CN187743; Name=CN187743; organism=Citrus sinensis; type=EST; length=612bp
AAAANANAANGANTCCCTTTAAAGAGCCCCCCTTTCGCTGGGCTACAGTT
TGTAAAATCTTTTCTTATCTCACAGGTTTTATTCAACCTCTCTAGTTATT
AGGTGGGTAAAAGAAAATGAAAAAACTTCTAATACAAATCTTGTCCGTAT
CAATCGCTTGCCCCCAAAAAAATTTTAAAAAAAGGGAAGGAACCAAAACA
AAAGCAAGTGCGCAATGACACAAGTGTCATGAGTTGCCTCAGGCAGGCTC
AAACTGCATAGTATATTATTGGCTTAGTAAGTGTAGCCCTTGACAAACAT
TCCTTTCTTGGCTTCCTCGCTTTCACCTTCTGCGGAGTACGTCCCAAGCT
GCGCCAAGGAATTTGCCTTTGCACGCACCAATAGTGACTTTTGTGCAGCT
TCAGTATTCTCAGGACGACCTTGCCATGTCTTAAGAACAGTGTTCTGAAG
TGCACGGGCATAAGAAAAGGACACGTGCCAGGGGTTGGGGGCTTGGTTCA
TCGCATTCAAGTTCAATGTTGCTTCCACTTCTGATTGTCCTCCAAACAAA
AACATGATTCCTGGGACTGCAGGGGGTACTCTCCTCCTGAGCATTGTAAG
TGTATATTTAGC
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