CN187733
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN187733 vs. ExPASy Swiss-Prot
Match: PUB16_ARATH (U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.394e-26 Identity = 56/88 (63.64%), Postives = 77/88 (87.50%), Query Frame = -1 Query: 306 EAMDVLPEESVTILEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAVPGIERVIWELMESGT 569 +A LPEE+V ++EAVV+RGGL A+ AA++ I+ L ++REG+DT+RESAAATLVT+CRKGGSE+VA++AA+PGIERVIWE++ +GT Sbjct: 542 DAFQELPEEAVAVVEAVVRRGGLMAVSAAFSLIRLLGEVMREGADTTRESAAATLVTMCRKGGSELVAEMAAIPGIERVIWEMIGAGT 629
BLAST of CN187733 vs. ExPASy Swiss-Prot
Match: ERF1X_ARATH (Eukaryotic peptide chain release factor subunit 1-1 OS=Arabidopsis thaliana GN=ERF1-1 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19 Identity = 48/51 (94.12%), Postives = 48/51 (94.12%), Query Frame = 3 Query: 576 NLPTSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENG 728 N TSQPNVSGLILAGSADFKTELSQSDMFDPRL AKILNVVDVSYGGENG Sbjct: 214 NPATSQPNVSGLILAGSADFKTELSQSDMFDPRLAAKILNVVDVSYGGENG 264
BLAST of CN187733 vs. ExPASy Swiss-Prot
Match: ERF1Z_ARATH (Eukaryotic peptide chain release factor subunit 1-3 OS=Arabidopsis thaliana GN=ERF1-3 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.018e-19 Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 3 Query: 576 NLPTSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENG 728 N TSQPNVSGLILAGSADFKTELSQS++FDPRLQAKILNVVDVSYGGENG Sbjct: 213 NPATSQPNVSGLILAGSADFKTELSQSELFDPRLQAKILNVVDVSYGGENG 263
BLAST of CN187733 vs. ExPASy Swiss-Prot
Match: ERF1Y_ARATH (Eukaryotic peptide chain release factor subunit 1-2 OS=Arabidopsis thaliana GN=ERF1-2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.018e-19 Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 3 Query: 576 NLPTSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENG 728 N TSQPNVSGLILAGSADFKTELSQS++FDPRLQAKILNVVDVSYGGENG Sbjct: 212 NPATSQPNVSGLILAGSADFKTELSQSELFDPRLQAKILNVVDVSYGGENG 262
BLAST of CN187733 vs. ExPASy Swiss-Prot
Match: ERF1_DROME (Eukaryotic peptide chain release factor subunit 1 OS=Drosophila melanogaster GN=eRF1 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16 Identity = 38/50 (76.00%), Postives = 46/50 (92.00%), Query Frame = 3 Query: 579 LPTSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENG 728 + +PN++GLILAGSADFKTELSQSDMFDPRLQ+K++ +VDVSYGGENG Sbjct: 214 ITNDKPNIAGLILAGSADFKTELSQSDMFDPRLQSKVIKLVDVSYGGENG 263
BLAST of CN187733 vs. ExPASy Swiss-Prot
Match: ERF1_POLMI (Eukaryotic peptide chain release factor subunit 1 OS=Polyandrocarpa misakiensis GN=ERF1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15 Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 3 Query: 579 LPTSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENG 728 + +PNV+GL+LAGSADFKTELSQSDMFD RLQ KIL +VDVSYGGENG Sbjct: 214 ITNDRPNVTGLVLAGSADFKTELSQSDMFDQRLQVKILKLVDVSYGGENG 263
BLAST of CN187733 vs. ExPASy Swiss-Prot
Match: ERF1_XENTR (Eukaryotic peptide chain release factor subunit 1 OS=Xenopus tropicalis GN=etf1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14 Identity = 36/44 (81.82%), Postives = 42/44 (95.45%), Query Frame = 3 Query: 597 NVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENG 728 NV+GL+LAGSADFKTELSQSDMFD RLQ+K+L +VD+SYGGENG Sbjct: 220 NVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENG 263
BLAST of CN187733 vs. ExPASy Swiss-Prot
Match: ERF1_XENLA (Eukaryotic peptide chain release factor subunit 1 OS=Xenopus laevis GN=etf1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14 Identity = 36/44 (81.82%), Postives = 42/44 (95.45%), Query Frame = 3 Query: 597 NVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENG 728 NV+GL+LAGSADFKTELSQSDMFD RLQ+K+L +VD+SYGGENG Sbjct: 220 NVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENG 263
BLAST of CN187733 vs. ExPASy Swiss-Prot
Match: ERF1_RAT (Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus GN=Etf1 PE=2 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14 Identity = 36/44 (81.82%), Postives = 42/44 (95.45%), Query Frame = 3 Query: 597 NVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENG 728 NV+GL+LAGSADFKTELSQSDMFD RLQ+K+L +VD+SYGGENG Sbjct: 220 NVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENG 263
BLAST of CN187733 vs. ExPASy Swiss-Prot
Match: ERF1_RABIT (Eukaryotic peptide chain release factor subunit 1 OS=Oryctolagus cuniculus GN=ETF1 PE=2 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14 Identity = 36/44 (81.82%), Postives = 42/44 (95.45%), Query Frame = 3 Query: 597 NVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENG 728 NV+GL+LAGSADFKTELSQSDMFD RLQ+K+L +VD+SYGGENG Sbjct: 220 NVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENG 263 The following BLAST results are available for this feature:
BLAST of CN187733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187733 ID=CN187733; Name=CN187733; organism=Citrus sinensis; type=EST; length=728bpback to top |