CK938476

Overview
NameCK938476
Unique NameCK938476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7231 contig Csv1_Contig7231:28..962. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C73_ARATH (Probable protein phosphatase 2C 73 OS=Arabidopsis thaliana GN=PPC6-7 PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 2.140e-93
Identity = 168/232 (72.41%), Postives = 197/232 (84.91%), Query Frame = 3
Query:  237 MGHFSSMFNGLARSFSIRKGKNSE-SCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLD-SDKKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERII 926
            MGHFSSMFNGLARSFSI+K KN+  +C  + AA+ MA EAK+ E+IL+SSG+VNV  SNN A++FSKRGEKGVNQDCA+VWE FGCQ DM+FCGIFDGHGPWGH+VAK+VR SMP SLLCNWQ+ LA+A+L P++DL+ S+KK  RF+IWK SY+KTCA VDQELE HRKIDS+YSGTTALTIVRQGE I VANVGDSRAVLA  S++GSL   QLT+DFKP+   E ERII
Sbjct:    1 MGHFSSMFNGLARSFSIKKVKNNNGNCDAKEAADEMASEAKKKELILKSSGYVNVQGSNNLASLFSKRGEKGVNQDCALVWEGFGCQEDMIFCGIFDGHGPWGHYVAKQVRNSMPLSLLCNWQKILAQATLEPELDLEGSNKKISRFDIWKQSYLKTCATVDQELEHHRKIDSYYSGTTALTIVRQGEVIYVANVGDSRAVLAMESDEGSLVAVQLTLDFKPNLPQEKERII 232          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C34_ARATH (Probable protein phosphatase 2C 34 OS=Arabidopsis thaliana GN=At3g05640 PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.909e-87
Identity = 158/232 (68.10%), Postives = 187/232 (80.60%), Query Frame = 3
Query:  237 MGHFSSMFNGLARSFSIRKGKN--SESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERII 926
            MGHFSSMFNG+ARSFSI+K KN  S     + A + MA+EAK+ E+ILRSSG +N D SNN A+VFS+RGEKGVNQDCAIVWE +GCQ DM+FCGIFDGHGPWGHFV+K+VR SMP SLLCNW+ETL++ ++      + DK+  RF IWK+S++KTC AVD ELE HRKIDSF SGTTALTIVRQG+ I +ANVGDSRAVLAT S++GSL   QLTVDFKP+   E ERII
Sbjct:    1 MGHFSSMFNGIARSFSIKKAKNINSSKSYAKEATDEMAREAKKKELILRSSGCINADGSNNLASVFSRRGEKGVNQDCAIVWEGYGCQEDMIFCGIFDGHGPWGHFVSKQVRNSMPISLLCNWKETLSQTTI-----AEPDKELQRFAIWKYSFLKTCEAVDLELEHHRKIDSFNSGTTALTIVRQGDVIYIANVGDSRAVLATVSDEGSLVAVQLTVDFKPNLPQEEERII 227          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C41_ARATH (Probable protein phosphatase 2C 41 OS=Arabidopsis thaliana GN=At3g16800 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.266e-61
Identity = 119/229 (51.97%), Postives = 164/229 (71.62%), Query Frame = 3
Query:  252 SMFNGLARSFSIRKGK--NSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGS-LGPGQLTVDFKPHXXYEAERIIQ 929
            +  +GLAR+ S +KGK  + +   GR  A++M K++K+N  +L +SGFV+ +SS  F ++ S RGEKG+NQD AIVWE FGCQ D+ FCG+FDGHGPWGH +AK+V++S PSSLLC WQ+TLA  S  P+        +  F++WK + +KT + +D +L+    IDS+ SG TALT V QG+ +++AN GDSRAV+ATTS+DG+ L P QL+VDFKP+   EAERI Q
Sbjct:    6 AFLDGLARTVSTKKGKKLSEDEDGGREIAKSMIKDSKKNSTLLGTSGFVSSESSKRFTSICSNRGEKGINQDRAIVWEGFGCQEDITFCGMFDGHGPWGHVIAKRVKKSFPSSLLCQWQQTLASLSSSPEC-------SSPFDLWKQACLKTFSIIDLDLKISPSIDSYCSGCTALTAVLQGDHLVIANAGDSRAVIATTSDDGNGLVPVQLSVDFKPNIPEEAERIKQ 227          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C48_ORYSJ (Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.074e-52
Identity = 115/238 (48.32%), Postives = 152/238 (63.87%), Query Frame = 3
Query:  237 MGHFSSMFNGLARSFSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKK---THRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSED----GSLGPGQLTVDFKPHXXYEAERIIQ 929
            M H SS+  GLARS S+ K +         AA A A        +LR+SG +  + S  FAAV S+RGEKG+NQDC+IV E FGC+   + CGIFDGHG WGH+VAK VRES+P +LL  W+E +  A+L     +D  +K     R ++W+ SY+  CAAVD EL   R++D+ +SG TAL++V+ G+ ++VANVGDSRAVLAT S D      L   QLTVDFKP+   E ERI++
Sbjct:    1 MRHISSLLQGLARSLSVGKERKGGDGDDGKAAAATATA------VLRTSGTLWGEGSETFAAVCSRRGEKGINQDCSIVCEGFGCEEGSVLCGIFDGHGQWGHYVAKAVRESLPPALLRRWREAVTLAAL-----IDGGEKRLCECRPDLWRQSYLAACAAVDAELRASRRLDAVHSGCTALSLVKHGDLLVVANVGDSRAVLATASPDDGGGARLAAVQLTVDFKPNLPQERERIME 227          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C33_ARATH (Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.682e-40
Identity = 88/253 (34.78%), Postives = 139/253 (54.94%), Query Frame = 3
Query:  276 SFSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLD-------------------------------------SDKKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERI 923
            +FS+RK KNS+    R  +   + + +R E + +  G + ++ S   A +++++G+KG NQD  +VWE FG + D +FCG+FDGHGP+GH VAK+VR+++P  L   W+  +    +L  I  D                                     ++ +   F   K S++K    +D+EL+ H  +D F SGTTA+T+++QG++++V NVGDSRAV+ T   + +L   QLTVD KP+   EAERI
Sbjct:   21 AFSVRKRKNSKK---RPGSRNSSFDYRREEPLNQVPGRMFLNGSTEVACIYTQQGKKGPNQDAMVVWENFGSRTDTIFCGVFDGHGPYGHMVAKRVRDNLPLKLSAYWEAKVPVEGVLKAITTDTVNNVTNINNPEDAAAAAAFVTAEEEPRTSADMEEENTETQPELFQTLKESFLKAFKVMDRELKFHGSVDCFCSGTTAVTLIKQGQYLVVGNVGDSRAVMGTRDSENTLVAVQLTVDLKPNLPAEAERI 270          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C75_ORYSJ (Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.535e-35
Identity = 81/200 (40.50%), Postives = 117/200 (58.50%), Query Frame = 3
Query:  384 GFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLL------------CNWQETLAEASLLPDIDLD------SDKKTHR--FNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERI 923
            G +  + + N A +F+++G+KG NQD  + WE +  ++D +FCG+FDGHGP GH +A+KVR+ +PS L              N   +  E +L P  D +      + +K H+  FN  K S+ K    VD+EL+  R IDS  SGTTA+T+++QG  ++V N+GDSRAVL T  ++  L   QLTVD KP    EA RI
Sbjct:   34 GRIAGNGAGNVACLFTRQGKKGTNQDAMVAWENYNGRSDTVFCGVFDGHGPHGHLIARKVRDILPSRLCDLIYEDCGDSPTSNSDVSTLEENLSPYADAECRSPTLAGQKEHQEFFNAMKESFRKAFKNVDKELKLQRNIDSICSGTTAVTLIKQGHDLIVGNLGDSRAVLGTRDQNDKLVAHQLTVDLKPDHPREARRI 233          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C74_ARATH (Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.535e-35
Identity = 80/211 (37.91%), Postives = 120/211 (56.87%), Query Frame = 3
Query:  366 MILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSD-------------------------KKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERI 923
            ++ R  G + ++ S +  ++FS++G+KG NQD  IVWE FG   D +FCG+FDGHGP+GH VAK+VR+ +P  L  + +  ++   +L +I L++D                         K      +   S VK    +D+EL+    +D F SGTTA+T+V+QG+ +++ N+GDSRAVL   ++D  L P QLT D KP    EAERI
Sbjct:   51 LLHRIPGRMFLNGSTDTVSLFSQQGKKGPNQDAMIVWENFGSMEDTVFCGVFDGHGPYGHIVAKRVRDLLPLKLGSHLESYVSPEEVLKEISLNTDDRKISEDLVHISANGESRVYNKDYVKDQDMIQMLIGSIVKAYRFMDKELKMQVDVDCFCSGTTAVTMVKQGQHLVIGNIGDSRAVLGVRNKDNKLVPFQLTEDLKPDVPAEAERI 261          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C66_ORYSJ (Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.923e-35
Identity = 91/239 (38.08%), Postives = 128/239 (53.56%), Query Frame = 3
Query:  279 FSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAE---------------ASLLPDIDL-------DSDKKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERIIQ 929
            FSI  G       G G  E   +E  + E      G V V+ ++  A + +++G KG NQD  +VWE F   +D +FCG+FDGHGP+GHFVAKKVR+S+P  +   W+ +  E               +   P +D        DS+K    F   K SY K    +D+EL+ H  +D F SG+TA+T+V+QG  ++V N+GDSRA++ T     +L   QLTVD KP+   EA RI Q
Sbjct:   49 FSIGVGGKKLHHGGGGGGEMTEEELAKVE------GRVCVNGASAAACLHTQQGRKGTNQDAMVVWENFNT-SDSVFCGVFDGHGPYGHFVAKKVRDSLPVKIRTLWKTSANEDTSSHQNGSISGSVNSEESPVVDDEWGEYADDSEKLPEMFLPLKQSYFKAFKLMDKELKMHPTVDCFCSGSTAVTLVKQGLDLVVGNLGDSRAIMGTRDAANNLTAVQLTVDLKPNLPREAARIQQ 280          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C18_ARATH (Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.549e-34
Identity = 79/215 (36.74%), Postives = 123/215 (57.21%), Query Frame = 3
Query:  399 DSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLL-----------------------CNWQE-----------------TLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERI 923
            + S+  A +++++G+KG NQD  +V+E F  + D +FCG+FDGHGP+GH VAKKVR+++P +LL                       C  +E                 T+ E     + ++++D+    +   KH+ +K+C  +D+EL+ H  ID F SGTT++T+++QGE ++V N+GDSRAVLAT  ED +L   QLT+D KP    E+ RI
Sbjct:   62 NGSSKIACLYTQQGKKGTNQDAMLVFENFCSRDDTVFCGVFDGHGPFGHMVAKKVRDTLPFTLLTQLKMTSESDQSSLVGANGFQIKCTEEEEVQTTESEQVQKTESVTTMDEQWCELNPNVNNDELPEMYLPLKHAMLKSCQQIDKELKMHPTIDCFCSGTTSVTLIKQGEDLVVGNIGDSRAVLATRDEDNALLAVQLTIDLKPDLPGESARI 276          
BLAST of CK938476 vs. ExPASy Swiss-Prot
Match: P2C01_ARATH (Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 73/182 (40.11%), Postives = 112/182 (61.54%), Query Frame = 3
Query:  417 AAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAE--------ASLLPDIDLDSDKKTHRFNI---WKHSYVKTCAAVDQELEQHRKIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLGPGQLTVDFKPHXXYEAERIIQ 929
            + +F+++G KG+NQD  IVWE+F    D+ FCG+FDGHGP GH VA+KVR+S+P  LL       ++        AS    ++ + ++ T    +   W+ +++K+  A+D+EL  H  ++ F SG TA+TI++QG  + + N+GDSRA+L +   + S+   QLTVD KP    EAERI Q
Sbjct:   61 SCIFTQQGRKGINQDAMIVWEDF-MSKDVTFCGVFDGHGPHGHLVARKVRDSLPVKLLSLLNSIKSKQNGPIGTRASKSDSLEAEKEESTEEDKLNFLWEEAFLKSFNAMDKELRSHPNLECFCSGCTAVTIIKQGSNLYMGNIGDSRAILGSKDSNDSMIAVQLTVDLKPDLPREAERIKQ 241          
The following BLAST results are available for this feature:
BLAST of CK938476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
P2C73_ARATH2.140e-9372.41Probable protein phosphatase 2C 73 OS=Arabidopsis ... [more]
P2C34_ARATH3.909e-8768.10Probable protein phosphatase 2C 34 OS=Arabidopsis ... [more]
P2C41_ARATH1.266e-6151.97Probable protein phosphatase 2C 41 OS=Arabidopsis ... [more]
P2C48_ORYSJ1.074e-5248.32Probable protein phosphatase 2C 48 OS=Oryza sativa... [more]
P2C33_ARATH4.682e-4034.78Probable protein phosphatase 2C 33 OS=Arabidopsis ... [more]
P2C75_ORYSJ4.535e-3540.50Probable protein phosphatase 2C 75 OS=Oryza sativa... [more]
P2C74_ARATH4.535e-3537.91Probable protein phosphatase 2C 74 OS=Arabidopsis ... [more]
P2C66_ORYSJ5.923e-3538.08Probable protein phosphatase 2C 66 OS=Oryza sativa... [more]
P2C18_ARATH6.549e-3436.74Probable protein phosphatase 2C 18 OS=Arabidopsis ... [more]
P2C01_ARATH2.489e-3340.11Probable protein phosphatase 2C 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004442_C12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIIF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938476 ID=CK938476; Name=CK938476; organism=Citrus sinensis; type=EST; length=931bp
GGGGATGGATTATTGCTGCAATAATTCATCTCAAGATTTTTTCTCTAGAA
TTCTCAGCTCAATAAGGGATCACCGGGATTGCTTCGGATTCCGGCGGCTG
ACGTCAGCTTTCCGGCTATTGGTTCCGAGCCCGGCTATCTGATATTGTTT
GTTTCTCCATCAAAGATTTTGAGTCTACATAAAGGGAAAGAAGAAGCCAA
CATTGACTCTGGTGTGGGGGGATTGAATTTGAGGAAATGGGGCATTTCTC
CTCCATGTTTAACGGATTGGCAAGGTCGTTTTCAATCAGAAAAGGGAAAA
ATTCTGAGAGTTGTGCTGGGAGAGGAGCTGCAGAAGCAATGGCTAAAGAA
GCCAAAAGGAATGAAATGATTTTAAGGTCTTCTGGTTTTGTAAATGTTGA
TAGTTCCAATAACTTTGCCGCAGTTTTCTCCAAGCGAGGCGAAAAAGGAG
TAAATCAAGATTGCGCAATTGTCTGGGAGGAATTTGGATGTCAGGCAGAC
ATGATGTTTTGTGGGATATTTGATGGGCATGGTCCTTGGGGTCATTTTGT
GGCTAAAAAGGTCCGGGAATCAATGCCTTCATCGTTGCTTTGTAATTGGC
AGGAGACTCTTGCTGAAGCTTCTCTTCTCCCAGATATTGACTTGGATTCG
GATAAAAAGACTCATAGATTCAACATATGGAAGCATTCTTATGTTAAGAC
TTGTGCTGCTGTTGATCAAGAGCTTGAGCAGCATCGAAAGATTGATTCAT
TCTACAGCGGAACAACTGCTTTGACAATTGTCAGACAGGGTGAATTCATA
ATGGTTGCTAATGTTGGTGACTCACGAGCTGTATTAGCCACCACTTCAGA
AGATGGAAGCTTGGGTCCAGGTCAGCTAACAGTTGATTTCAAGCCCCACN
NNNCTTATGAAGCTGAGCGGATAATTCAATG
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