CK938470

Overview
NameCK938470
Unique NameCK938470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938470 vs. ExPASy Swiss-Prot
Match: CSLA1_CYATE (Mannan synthase 1 OS=Cyamopsis tetragonoloba GN=ManS PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.954e-15
Identity = 36/55 (65.45%), Postives = 44/55 (80.00%), Query Frame = -3
Query:  304 LTNRLHVLELIMGTFMLYCAIYNLIFCQDHFFVYLLLQVGAFFIMGFGYVGTSVP 468
            +  R+H LE+I+G +ML+CA Y+L+F  DHFFVYLLLQ GAFF MGFG VGT VP
Sbjct:  471 IIERIHPLEIIVGMYMLHCATYDLLFGHDHFFVYLLLQAGAFFTMGFGLVGTIVP 525          
The following BLAST results are available for this feature:
BLAST of CK938470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CSLA1_CYATE7.954e-1565.45Mannan synthase 1 OS=Cyamopsis tetragonoloba GN=Ma... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004442_E04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIIF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938470 ID=CK938470; Name=CK938470; organism=Citrus sinensis; type=EST; length=863bp
GGGGAAGAGTCAATTTTAGGATTTTCTTCTAGATTACAAAGAAAGAATAT
TTTGCAGAAGCAGATTTCTCCGAGACATGGAGCTGCAAGAATAAGTTTAT
TGTGAAGATTCAGAAAGGATGCCGTTCCATCAGATAAAAGGGTAGTTATT
CTGCATTTACTATCAACATTTGTTTATTTTTATTCTACTAAATACACATA
AGTTTTAACTAGTCTTACATGCACCTACTTCTAGGTTCTAGCCATAGAAA
CAGTGAAATAAAATGCTACAAGATAGAGAGTAAAAGCTAGCGTTGTTCTA
ATTAGGTACAGATGTCCCCACATATCCGAATCCCATTATGAAGAATGCCC
CAACTTGCAGTAAGAGATACACAAAGAAATGATCTTGGCAAAATATCAGG
TTATAGATTGCACAGTAGAGCATAAACGTCCCCATTATCAGCTCCAAAAC
ATGCAGCCTGTTTGTCAAAATAGTCTTGTTAAATCAAATTATAGTTAGTT
AATGCTTTGGTGATGTTATATTCTGTATGGCAAAATGTTCTGCTTTTATG
TGAATTTTGGCTCTTTATCCTCTTTGTAATTGATGGGTCTTTGTGGTGCT
CTAGCTTTTGTTCGCATGCTTATTTGAGTGATGGTTCTTGAACAGAATAG
CTATTTGCTGTGTTTATTTTGCACTTAGGTGTAGTGAAATTATAGCTCAC
ATAGTAAGAATAGATAAATACCTTTCTCCAACTCGAGACCGTGATTTCTT
TAGCGTTTTGATGTTATTCTTTTGCTTCTTCGTGTTCCCATGCTTCNCCC
GTTACGACCCATTCATTGACGCGATTAGCTTCTAGGAGNCCTATAATTGC
TGCTTTAGCTCGA
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