CK938456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938456 vs. ExPASy Swiss-Prot
Match: TM9S3_MOUSE (Transmembrane 9 superfamily member 3 OS=Mus musculus GN=Tm9sf3 PE=1 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 7.767e-68 Identity = 121/210 (57.62%), Postives = 145/210 (69.05%), Query Frame = 1 Query: 4 IAIFYGSLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSMMGGLLPFGSIFIEMYFVFTSSWNYKVYYVYGFMXXXXXXXXXXXXXXXXXXXYFLLNAENYHWQWTSFFSAASTAXXXXXXXXXXXXXKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 633 IAI+Y + AIPFGTMV V I F+ PL L+GT++GRN SG PN PCRV +PRPIPEKKW++ P+V+ +GG+LPFGSIFIEMYF+FTS W YK+YYVYGFM YFLLNAE+Y WQWTSF SAASTA KTKM G FQTSFYFGY +F LGI+CGA+GY+G++ FVR+IY N+K D Sbjct: 378 IAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILGRNLSGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 587
BLAST of CK938456 vs. ExPASy Swiss-Prot
Match: TM9S3_HUMAN (Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 7.767e-68 Identity = 121/210 (57.62%), Postives = 145/210 (69.05%), Query Frame = 1 Query: 4 IAIFYGSLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSMMGGLLPFGSIFIEMYFVFTSSWNYKVYYVYGFMXXXXXXXXXXXXXXXXXXXYFLLNAENYHWQWTSFFSAASTAXXXXXXXXXXXXXKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 633 IAI+Y + AIPFGTMV V I F+ PL L+GT++GRN SG PN PCRV +PRPIPEKKW++ P+V+ +GG+LPFGSIFIEMYF+FTS W YK+YYVYGFM YFLLNAE+Y WQWTSF SAASTA KTKM G FQTSFYFGY +F LGI+CGA+GY+G++ FVR+IY N+K D Sbjct: 380 IAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILGRNLSGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 589
BLAST of CK938456 vs. ExPASy Swiss-Prot
Match: PHG1B_DICDI (Putative phagocytic receptor 1b OS=Dictyostelium discoideum GN=phg1b PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.429e-37 Identity = 75/211 (35.55%), Postives = 107/211 (50.71%), Query Frame = 1 Query: 1 TIAIFYGSLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSMMGGLLPFGSIFIEMYFVFTSSWNYKVYYVYGFMXXXXXXXXXXXXXXXXXXXYFLLNAENYHWQWTSFFSAASTAXXXXXXXXXXXXXKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 633 T+AI + S A+P TM+ V IW F+ FPL ++G + GR S PCR K PR +P +WY ++ G LPF +I+IE++++F S W + Y +YG + YF L+ E++ W W SF + ST + M G Q +FYF Y L+ C IL G VG+ S +FV+RIYRN+K D Sbjct: 377 TVAITWHSTVALPILTMIEVITIWLFVGFPLTVVGGIAGRRLSENFEAPCRTKNFPREVPPIQWYRRLPCQILIAGFLPFSAIYIELFYIFNSVWGHSTYTLYGILCLVFLILINVTVCITVALTYFQLSMEDHKWWWNSFINGGSTVVFIYMYSIYYYYYISHMYGLLQATFYFTYMLIVCFFFFILLGTVGFYSSLIFVKRIYRNLKSD 587
BLAST of CK938456 vs. ExPASy Swiss-Prot
Match: TM9S2_RAT (Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.596e-36 Identity = 76/205 (37.07%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 19 GSLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSMMGGLLPFGSIFIEMYFVFTSSWNYKVYYVYGFMXXXXXXXXXXXXXXXXXXXYFLLNAENYHWQWTSFFSAASTAXXXXXXXXXXXXXKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 633 GS AAIPFGT+V + +W IS PL +G G A +P R IPR IPE+ +Y P +MGG+LPFG IFI+++F+ S W++++YY++GF+ YF L AE+YHWQW SF ++ TA K +++G T YFGYT++ L + G +G+ FV +IY +K D Sbjct: 460 GSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFK-KNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLVYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CK938456 vs. ExPASy Swiss-Prot
Match: TM9S2_PONAB (Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.596e-36 Identity = 76/205 (37.07%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 19 GSLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSMMGGLLPFGSIFIEMYFVFTSSWNYKVYYVYGFMXXXXXXXXXXXXXXXXXXXYFLLNAENYHWQWTSFFSAASTAXXXXXXXXXXXXXKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 633 GS AAIPFGT+V + +W IS PL +G G A +P R IPR IPE+ +Y P +MGG+LPFG IFI+++F+ S W++++YY++GF+ YF L AE+YHWQW SF ++ TA K +++G T YFGYT++ L + G +G+ FV +IY +K D Sbjct: 460 GSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFK-KNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CK938456 vs. ExPASy Swiss-Prot
Match: TM9S2_MOUSE (Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.596e-36 Identity = 76/205 (37.07%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 19 GSLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSMMGGLLPFGSIFIEMYFVFTSSWNYKVYYVYGFMXXXXXXXXXXXXXXXXXXXYFLLNAENYHWQWTSFFSAASTAXXXXXXXXXXXXXKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 633 GS AAIPFGT+V + +W IS PL +G G A +P R IPR IPE+ +Y P +MGG+LPFG IFI+++F+ S W++++YY++GF+ YF L AE+YHWQW SF ++ TA K +++G T YFGYT++ L + G +G+ FV +IY +K D Sbjct: 459 GSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFK-KNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 662
BLAST of CK938456 vs. ExPASy Swiss-Prot
Match: TM9S2_HUMAN (Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.596e-36 Identity = 76/205 (37.07%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 19 GSLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSMMGGLLPFGSIFIEMYFVFTSSWNYKVYYVYGFMXXXXXXXXXXXXXXXXXXXYFLLNAENYHWQWTSFFSAASTAXXXXXXXXXXXXXKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 633 GS AAIPFGT+V + +W IS PL +G G A +P R IPR IPE+ +Y P +MGG+LPFG IFI+++F+ S W++++YY++GF+ YF L AE+YHWQW SF ++ TA K +++G T YFGYT++ L + G +G+ FV +IY +K D Sbjct: 460 GSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFK-KNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CK938456 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.641e-33 Identity = 71/204 (34.80%), Postives = 105/204 (51.47%), Query Frame = 1 Query: 22 SLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSMMGGLLPFGSIFIEMYFVFTSSWNYKVYYVYGFMXXXXXXXXXXXXXXXXXXXYFLLNAENYHWQWTSFFSAASTAXXXXXXXXXXXXXKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 633 S A+PF TMV + +W IS PL LG G +NP R IPR IPE++WY+ V +M G+LPFG++FIE++F+F++ W + YY++GF+ YF L AE+Y W W +F + +A K + F + YFGYT + L +L G +G+ + +FVR+IY +K D Sbjct: 441 SSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFR-KQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 643
BLAST of CK938456 vs. ExPASy Swiss-Prot
Match: TM9S4_PONAB (Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.641e-33 Identity = 71/204 (34.80%), Postives = 105/204 (51.47%), Query Frame = 1 Query: 22 SLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSMMGGLLPFGSIFIEMYFVFTSSWNYKVYYVYGFMXXXXXXXXXXXXXXXXXXXYFLLNAENYHWQWTSFFSAASTAXXXXXXXXXXXXXKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 633 S A+PF TMV + +W IS PL LG G +NP R IPR IPE++WY+ V +M G+LPFG++FIE++F+F++ W + YY++GF+ YF L AE+Y W W +F + +A K + F + YFGYT + L +L G +G+ + +FVR+IY +K D Sbjct: 440 SSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFR-KQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CK938456 vs. ExPASy Swiss-Prot
Match: TM9S4_MOUSE (Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.641e-33 Identity = 71/204 (34.80%), Postives = 105/204 (51.47%), Query Frame = 1 Query: 22 SLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSMMGGLLPFGSIFIEMYFVFTSSWNYKVYYVYGFMXXXXXXXXXXXXXXXXXXXYFLLNAENYHWQWTSFFSAASTAXXXXXXXXXXXXXKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 633 S A+PF TMV + +W IS PL LG G +NP R IPR IPE++WY+ V +M G+LPFG++FIE++F+F++ W + YY++GF+ YF L AE+Y W W +F + +A K + F + YFGYT + L +L G +G+ + +FVR+IY +K D Sbjct: 441 SSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFR-KQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 643 The following BLAST results are available for this feature:
BLAST of CK938456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938456 ID=CK938456; Name=CK938456; organism=Citrus sinensis; type=EST; length=842bpback to top |