CK938447

Overview
NameCK938447
Unique NameCK938447
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length271
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2579 contig Csv1_Contig2579:541..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK938447 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.047e-12
Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 2 
Query:    5 KKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 151
            KKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:   18 KKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64
The following BLAST results are available for this feature:
BLAST of CK938447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MT3_CARPA1.047e-1263.27Metallothionein-like protein type 3 OS=Carica papa... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004442_F10 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIIF_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938447 ID=CK938447; Name=CK938447; organism=Citrus sinensis; type=EST; length=271bp
GGGGAAGAAGGGAAGCAGCTATGCTGCTGACTTCGTCGAGACTGACTTGA
GCTTTGTCAGCACCGTTGTTGTCATGGACGTTCAGGCTGCTGAGGCTGAA
GGTAACTGCAAGTGCGGCCCCACCTGCGCTTGTGTGAACTGCACTTGTGG
TAGTCACTAATAAGCAAACACATGCAGCAAAAAATAAGAAGCTGCAAGTG
TGCCTAAATATTGTGGGGGTTAAGAATAATGTAAGGGTGATTAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA
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