CK938437

Overview
NameCK938437
Unique NameCK938437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6274 contig Csv1_Contig6274:6..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938437 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 360.533 bits (924), Expect = 7.110e-99
Identity = 186/255 (72.94%), Postives = 199/255 (78.04%), Query Frame = 1
Query:  112 MTAELQLPPGFRFHPTDEELVMHYLCRKCLSQPIAVPIIAEIDLYKFDPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSAR-KKNSLRLDDWVLCRIYNKKGSIEKKQQVTNRRPNFXXXXXXXXXKKPVVMPSGMDKSTSGGALIPNPASTVTGTGTVNDYMYFDTSDSVPKLN-TDSSCSEHVVSPEFTCEVQSE 870
            M+  LQLPPGFRFHPTDEELVMHYLCRKC SQ IAVPIIAEIDLYK+DPW+LP LALYGEKEWYFF+PRDRKYPNGSRPNR+AGSGYWKATGADKPIG PKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRS R KKNSLRLDDWVLCRIYNKKG+ E++       P           +KP V    M          P P  T       +++ YFDTSDSVPKL+ TDSSCSE VVSPEFT EVQSE
Sbjct:    1 MSELLQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGP-----PPPVVYGDEIMEEKPKVTEMVMP---------PPPQQT-------SEFAYFDTSDSVPKLHTTDSSCSEQVVSPEFTSEVQSE 234          
BLAST of CK938437 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 3.529e-98
Identity = 177/251 (70.52%), Postives = 195/251 (77.69%), Query Frame = 1
Query:  121 ELQLPPGFRFHPTDEELVMHYLCRKCLSQPIAVPIIAEIDLYKFDPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKKQQVTNRRPNFXXXXXXXXXKKPVVMPSGMDKSTSGGALIPNPASTVTGTGTVNDYMYFD-TSDSVPKLNTDSSCSEHVVSPEFTCEVQSE 870
            +LQLPPGFRFHPTDEELVMHYLCR+C   PIAVPIIAEIDLYKFDPW LP +ALYGEKEWYFF+PRDRKYPNGSRPNRAAGSGYWKATGADKP+G PKPV IKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG +EK                    +KP+V   G++ + S     P     V G    +   Y+D  SDS+P+L+ DSSCSE V+SPEF CEVQS+
Sbjct:    6 DLQLPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSPKPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGLEKPPAAAVAAAGM-VSSGGGVQRKPMV---GVNAAVSSP---PEQKPVVAGPAFPDLAAYYDRPSDSMPRLHADSSCSEQVLSPEFACEVQSQ 249          
BLAST of CK938437 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 5.119e-81
Identity = 156/260 (60.00%), Postives = 179/260 (68.85%), Query Frame = 1
Query:  112 MTAELQLPPGFRFHPTDEELVMHYLCRKCLSQPIAVPIIAEIDLYKFDPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSA--RKKNSLRLDDWVLCRIYNKKGSIEKKQQVTNRRPNFXXXXXXXXXKKPVVMPSGMDKSTSGGALIPNPASTVTGTGTVNDYMYFDTSDSVPKLNT-DSSCSEHVVSPEFTC----EVQSE 870
            M AEL LP GFRFHPTDEELV  YLCR+C S+PI VP+IAEIDLYKF+PW+LP++ALYGEKEWYFF+ RDRKYPNGSRPNRAAG+GYWKATGADKPIG+PK +GIKKALVFYAGKAPKG KTNWIMHEYRLA+VDRSA   KKN+LRLDDWVLCRIYNKKG++EK                         +P+  +K T                                K++T DS CS HV+SP+ TC    EV+SE
Sbjct:   44 MKAELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEK------------------------YLPAAAEKPTE-------------------------------KMSTSDSRCSSHVISPDVTCSDNWEVESE 248          
BLAST of CK938437 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 4.333e-80
Identity = 152/263 (57.79%), Postives = 177/263 (67.30%), Query Frame = 1
Query:  124 LQLPPGFRFHPTDEELVMHYLCRKCLSQPIAVPIIAEIDLYKFDPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKK-------NSLRLDDWVLCRIYNKKGSIEKKQQVTNRRPNFXXXXXXXXXKKPVVMPSGMDKSTSGGALIPNPASTVTGTGTVNDYMYFDTS----------------DSVPKLNTDSSCSEHVVSP 843
            LQLPPGFRFHPTD+ELVM+YLCRKC   P+A P+IAE+DLYKF+PWDLP+ A+ GEKEWYFF+PRDRKYPNG RPNRAAG+GYWKATGADKP+G P+ V IKKALVFYAGK PKG KTNWIMHEYRLADVDRSA  +       N+LRLDDWVLCRIYNKKG IE+   V                    V P+    +  GG  I            ++DY ++D                  DS+P+L+TDSS SEHV+SP
Sbjct:    7 LQLPPGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGSPRAVAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKKGVIERYDTVDAGED---------------VKPAAAAAAAKGGR-IGGGGGAAAMKVELSDYGFYDQEPESEMLCFDRSGSADRDSMPRLHTDSSGSEHVLSP 253          
BLAST of CK938437 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.950e-72
Identity = 126/165 (76.36%), Postives = 141/165 (85.45%), Query Frame = 1
Query:  118 AELQLPPGFRFHPTDEELVMHYLCRKCLSQPIAVPIIAEIDLYKFDPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI---GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRS-ARKKNSLRLDDWVLCRIYNKKGSIEK 600
            AEL LPPGFRFHPTDEELV+HYLCRK   QP+ VPIIAE+DLYK DPWDLP+ AL+G KEWYFFTPRDRKYPNGSRPNRAAG GYWKATGADKP+   G  + VGIKKALVFY+GKAP+G KT+WIMHEYRLAD DR+   KK S +LD+WVLCR+YNKK + EK
Sbjct:   17 AELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEK 181          
BLAST of CK938437 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 2.161e-63
Identity = 115/166 (69.28%), Postives = 128/166 (77.11%), Query Frame = 1
Query:  118 AELQLPPGFRFHPTDEELVMHYLCRKCLSQPIAVPIIAEIDLYKFDPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVD--RSARKKNSLRLDDWVLCRIYNKKGSIEKKQ 606
            A+L LPPGFRFHPTDEELV HYLC +   +   VPIIAE+DLY+ DPWDLP  AL+G +EWYFFTPRDRKYPNGSRPNRAA SGYWKATGADKP+    +  GIKKALVFY GK P+G KT WIMHEYRLA      +A    +LRLDDWVLCR+YNKK   EK Q
Sbjct:   13 ADLNLPPGFRFHPTDEELVAHYLCPRAAGRAAPVPIIAELDLYRHDPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNKKNEWEKMQ 178          
BLAST of CK938437 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.813e-63
Identity = 113/163 (69.33%), Postives = 131/163 (80.37%), Query Frame = 1
Query:  118 AELQLPPGFRFHPTDEELVMHYLCRKCLSQPIAVPIIAEIDLYKFDPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKK 603
            A+L LPPGFRF+PTDEEL++ YLCRK      ++ +IAEIDLYKFDPW LP  AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKKALVFY GKAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +K+
Sbjct:   10 AQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQTSAQKQ 169          
BLAST of CK938437 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.401e-62
Identity = 117/167 (70.06%), Postives = 132/167 (79.04%), Query Frame = 1
Query:  118 AELQLPPGFRFHPTDEELVMHYLCRKCLSQPIAVPIIAEIDLYKFDPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKKQQVT 615
            A+L LPPGFRF+PTDEEL++ YLCRK      ++ +I +IDLYKFDPWDLP  AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I    + VGIKKALVFYAGKAPKG KTNWIMHEYRL +  RS     S +LDDWVLCRIY KK S  ++Q VT
Sbjct:   10 AQLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRS---HGSSKLDDWVLCRIY-KKTSGSQRQAVT 172          
BLAST of CK938437 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.401e-62
Identity = 112/162 (69.14%), Postives = 131/162 (80.86%), Query Frame = 1
Query:  121 ELQLPPGFRFHPTDEELVMHYLCRKCLSQPIAVPIIAEIDLYKFDPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKK 603
            +L LPPGFRF+PTDEEL++ YLCRK      ++ +IAEIDLYKFDPW LP+ AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKKALVFY GKAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +K+
Sbjct:   11 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQKQ 169          
BLAST of CK938437 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.401e-62
Identity = 114/164 (69.51%), Postives = 129/164 (78.66%), Query Frame = 1
Query:  130 LPPGFRFHPTDEELVMHYLCRKCLSQPIAVPIIAEIDLYKFDPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-----GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLAD-----VDRSARKKNSLRLDDWVLCRIYNKKGS 591
            LPPGFRFHPTDEELV+HYL RK  S P+ V IIA++DLYKFDPW+LP  A +GE+EWYFF+PRDRKYPNG+RPNRAA SGYWKATG DKP+     G  K VG+KKALVFY+GK PKG K++WIMHEYRL D     +     KKNSLRLDDWVLCRIY K  S
Sbjct:   17 LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNS 180          
The following BLAST results are available for this feature:
BLAST of CK938437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC2_ARATH7.110e-9972.94NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC48_ORYSJ3.529e-9870.52NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NA102_ARATH5.119e-8160.00NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC71_ORYSJ4.333e-8057.79NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC68_ORYSJ1.950e-7276.36NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC67_ORYSJ2.161e-6369.28NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC55_ARATH4.813e-6369.33NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC72_ARATH1.401e-6270.06NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC19_ARATH1.401e-6269.14NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC18_ARATH1.401e-6269.51NAC domain-containing protein 18 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004442_G11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIIF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938437 ID=CK938437; Name=CK938437; organism=Citrus sinensis; type=EST; length=886bp
GGGGAAGCGCCGTCATAGTTCTCAGAGGGTAGGGAGGTTTGGAGATAAGA
ACTAAGCGGAGAGGGTACAATCAGCAACAAGAAGAAGAAATAGAAGGGCA
AAAAAGTCAAAATGACGGCTGAGTTACAGTTACCACCAGGTTTCAGGTTC
CACCCGACCGATGAGGAGCTCGTTATGCACTATTTGTGCCGTAAATGCCT
TTCGCAGCCAATCGCCGTTCCGATTATCGCCGAAATCGATCTTTACAAAT
TTGACCCCTGGGACCTCCCAGATTTGGCCCTGTATGGGGAAAAGGAGTGG
TACTTTTTTACGCCTAGGGATCGGAAGTATCCAAACGGTTCAAGGCCGAA
CCGGGCGGCGGGGAGCGGGTACTGGAAGGCAACAGGAGCCGATAAGCCGA
TTGGCCAGCCGAAGCCCGTTGGAATTAAGAAGGCTCTTGTTTTTTACGCC
GGAAAAGCGCCTAAAGGAGAGAAAACCAACTGGATTATGCACGAGTATCG
GTTAGCTGACGTGGATCGCTCGGCTCGTAAGAAGAACAGCTTAAGGCTGG
ACGATTGGGTGCTGTGTCGCATATACAACAAGAAGGGATCTATTGAGAAA
AAACAGCAGGTCACTAATCGGAGGCCGAATTTTACGGAGACGGAGACGGA
GACGGAGGAGAAGAAACCGGTGGTTATGCCAAGTGGCATGGACAAGTCAA
CGTCAGGAGGAGCACTGATTCCGAATCCGGCGTCGACCGTAACAGGAACG
GGAACAGTGAATGATTACATGTATTTTGACACGTCGGATTCGGTGCCGAA
GCTGAACACGGACTCGAGTTGCTCGGAGCACGTGGTGTCACCGGAGTTCA
CGTGCGAGGTGCAGAGCGAGCNTNAAATGCAACCCT
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