CK938434

Overview
NameCK938434
Unique NameCK938434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2680 contig Csv1_Contig2680:218..1000. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938434 vs. ExPASy Swiss-Prot
Match: PTRB_ECOLI (Protease 2 OS=Escherichia coli (strain K12) GN=ptrB PE=1 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.441e-57
Identity = 112/213 (52.58%), Postives = 150/213 (70.42%), Query Frame = 3
Query:  144 LRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVY-RKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPR 779
            LR+ YSS+ TP ++++ DMD G   + K +T + GF   NY +E  W  A DG ++P+ +VY RK+  K  G +PLL+YGYGSY    D  F+ SRLSLLDRGF++AI  +RGGGELG+QWYE+GKFLKKKNTF D++   + L+K  Y +       G SAGG+L+G  +N RP+LF   +A VPFVDV+TTMLD +IPLTT E+EEWG+P+
Sbjct:  375 LRYGYSSMTTPDTLFELDMDTGERRVLK-QTEVPGFYAANYRSEHLWIVARDGVEVPVSLVYHRKHFRK--GHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQ 584          
BLAST of CK938434 vs. ExPASy Swiss-Prot
Match: PTRB_MORLA (Protease 2 OS=Moraxella lacunata GN=ptrB PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.477e-57
Identity = 108/237 (45.57%), Postives = 154/237 (64.98%), Query Frame = 3
Query:   75 KSVEFIDPVYSIDP-SESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPRK 782
            + + + +P+Y++   SE  + +  +   Y SL TP + +  ++  G     ++  V G +D + +  E+ WA+   G ++P+  VY +  +  +G  PL+LYGYGSY   +DP F+  RL LL++G +F  AQ+RGG E+GR WYE+GK   K+NTFTDFIA A++LI   Y +  K+   G SAGGLL+GAV NM  +LFK  V AVPFVDV+TTMLD +IPLTT EW+EWGDPRK
Sbjct:  352 QQISWDEPLYTVAVLSEQSYDTNEVLIQYESLLTPKTTFGLNLQTGEKQCLQVAPVSGEYDRSQFRQEQLWATGRSGVKVPMTAVYLEGALD-NGPAPLILYGYGSYGSNSDPRFDPYRLPLLEKGIVFVTAQVRGGSEMGRGWYEDGKMQNKRNTFTDFIAAAKHLIDQNYTSPTKMAARGGSAGGLLVGAVANMAGELFKVIVPAVPFVDVVTTMLDTSIPLTTLEWDEWGDPRK 587          
BLAST of CK938434 vs. ExPASy Swiss-Prot
Match: PPCE_FLAME (Prolyl endopeptidase OS=Flavobacterium meningosepticum GN=f1pep1 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.726e-39
Identity = 92/239 (38.49%), Postives = 140/239 (58.58%), Query Frame = 3
Query:    3 GGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE--SVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL 713
            GG     TY   A+ +  +  + GK V  I    S + S      + + L + +++  TPP+++ Y++  G S + +   V   F+  NY +E+ + ++SDGT+IP+ I Y+K L K DG +P +LY YG + I   PAF+      ++ G I+A+  IRGGGE G++W++ G  ++KKN F DFIA  EYL KN Y +KE + + GRS GGLL+GA + MRPDL K A   V  +D+L
Sbjct:  351 GGGYFFATYMKDAIDQVKQYDKNGKLVRAIKLPGSGNASGFGGEKTEKDLYYSFTNYITPPTIFKYNVTTGNSEVYQKPKVK--FNPENYVSEQVFYTSSDGTKIPMMISYKKGLKK-DGKNPTILYSYGGFNISLQPAFSVVNAIWMENGGIYAVPNIRGGGEYGKKWHDAGTKMQKKNVFNDFIAAGEYLQKNGYTSKEYMALSGRSNGGLLVGATMTMRPDLAKVAFPGVGVLDML 586          
BLAST of CK938434 vs. ExPASy Swiss-Prot
Match: PPCE_AERHY (Prolyl endopeptidase OS=Aeromonas hydrophila PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 8.222e-37
Identity = 78/190 (41.05%), Postives = 118/190 (62.11%), Query Frame = 3
Query:  144 LRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL 713
            L F + +   PP++Y ++ + G   L +       F   +Y +E+++  + DGT++P+ I YRK L KLDGS+P +LYGYG +++   P+F+ S  + LD G ++A+A +RGGGE G+ W+  G  + K+N F DFIA AEYL    Y   ++L I G S GGLL+GAV+  RPDL + A  AV  +D+L
Sbjct:  382 LYFGFENYAQPPTLYKFEPNSGAISLYRASAA--PFKPEDYVSEQRFYRSKDGTRVPLIISYRKGL-KLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTRMNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVACQAVGVLDML 568          
BLAST of CK938434 vs. ExPASy Swiss-Prot
Match: PPCF_ELIMR (Prolyl endopeptidase OS=Elizabethkingia miricola PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.074e-36
Identity = 78/190 (41.05%), Postives = 120/190 (63.16%), Query Frame = 3
Query:  144 LRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL 713
            L + +++  TPP+++ + +D G S + +   V   F+  NY +E+ + +++DGT+IP+ I  +K L K DG +P +LY YG + I   PAF+      ++ G I+A+  IRGGGE G++W++ G   +KKN F DFIA  EYL KN Y +K+ + + GRS GGLL+GA + MRPDL K A   V  +D+L
Sbjct:  400 LYYSFTNYITPPTIFKFSIDSGKSEVYQKPKVK--FNPENYVSEQVFYTSADGTKIPMMISNKKGLKK-DGKNPTILYSYGGFNISLQPAFSVVNAIWMENGGIYAVPNIRGGGEYGKKWHDAGTKQQKKNVFNDFIAAGEYLQKNGYTSKDYMALSGRSNGGLLVGATMTMRPDLAKVAFPGVGVLDML 586          
BLAST of CK938434 vs. ExPASy Swiss-Prot
Match: Y4QF_RHISN (Uncharacterized peptidase y4qF OS=Rhizobium sp. (strain NGR234) GN=NGR_a01920 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.515e-34
Identity = 87/223 (39.01%), Postives = 122/223 (54.71%), Query Frame = 3
Query:  129 FSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF------NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPR 779
            F S  L +  SS  TP +  ++D     SV+   E  + G+D   Y      A A DG Q+PI +V R++        P+LL  YG Y I   P+F       ++RLSLLDR   F I  +RGGGELGR W++     +K+ T TD I+  E LI+  + T++ + IEG+S GG  + A    RP+LF+A VA VP  D++ T LD T+P T  E  E+GDP+
Sbjct:  419 FRSSKLTYSVSSFVTPDTFIEHDFANDRSVVL-CEARVPGYDATQYLATVVMAEAEDGVQVPISLVARRDRTS---PGPVLLSVYGCYGIPRLPSFLAWPSSMTARLSLLDREVAFGIVHVRGGGELGRPWHDAATRDQKRITHTDLISATEGLIERGFATRDGVVIEGKSGGGGTVLATAVFRPNLFRAVVAEVPLADIIDTQLDSTMPYTLKETAEYGDPQ 637          
BLAST of CK938434 vs. ExPASy Swiss-Prot
Match: Y4SO_RHISN (Uncharacterized peptidase y4sO OS=Rhizobium sp. (strain NGR234) GN=NGR_a01580 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.476e-33
Identity = 82/187 (43.85%), Postives = 114/187 (60.96%), Query Frame = 3
Query:  234 TVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF------NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP 776
            T++ GF+   Y      A A DG ++PI IV R++  + DG  P+LL  YG Y   + PAF       ++RLSLLDRG  F I  +RGGGELGR W+E     +K+ T TD IA AE L+++ + +++ + IEGRSAGG  + A   +RPDLF+A +A VP  D++ T LD T+P    E  E+GDP
Sbjct:  422 TLVSGFEPELYEARVVMAKAEDGVEVPISIVARRDRGE-DG--PVLLNVYGCYGAQSLPAFFGWPSSMTARLSLLDRGVAFGIVHVRGGGELGRAWHEAATRDQKRLTHTDLIAAAECLVEHRFASRDGIVIEGRSAGGGTVLAAAVLRPDLFRAVLAEVPLADIIDTELDFTLPYALRETAEYGDP 605          
BLAST of CK938434 vs. ExPASy Swiss-Prot
Match: PPCE_RAT (Prolyl endopeptidase OS=Rattus norvegicus GN=Prep PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.407e-33
Identity = 78/192 (40.62%), Postives = 113/192 (58.85%), Query Frame = 3
Query:  150 FHYSSLRTPPSVYDYDM---DMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL 713
            + ++S  +P  +Y  D+   ++   V +  E  + G D ++Y T + +  + DGT+IP+ IV++K  +KLDGS P  LYGYG + I   P ++ SRL  +   G + A+A IRGGGE G  W++ G    K+N F DF   AEYLIK  Y T ++L I G S GGLL+ A  N RPDLF   +A V  +D+L
Sbjct:  396 YQFTSFLSPGVIYHCDLTREELEPRVFR--EVTVKGIDASDYQTIQVFYPSKDGTKIPMFIVHKKG-IKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTTSKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDML 584          
BLAST of CK938434 vs. ExPASy Swiss-Prot
Match: PPCE_HUMAN (Prolyl endopeptidase OS=Homo sapiens GN=PREP PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.737e-32
Identity = 78/192 (40.62%), Postives = 113/192 (58.85%), Query Frame = 3
Query:  150 FHYSSLRTPPSVYDYDM---DMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL 713
            + ++S  +P  +Y  D+   ++   V +  E  + G D ++Y T + +  + DGT+IP+ IV++K  +KLDGS P  LYGYG + I   P ++ SRL  +   G I A+A IRGGGE G  W++ G    K+N F DF   AEYLIK  Y + ++L I G S GGLL+ A  N RPDLF   +A V  +D+L
Sbjct:  396 YQFTSFLSPGIIYHCDLTKEELEPRVFR--EVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKG-IKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGILAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDML 584          
BLAST of CK938434 vs. ExPASy Swiss-Prot
Match: PPCE_MOUSE (Prolyl endopeptidase OS=Mus musculus GN=Prep PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.963e-32
Identity = 76/190 (40.00%), Postives = 110/190 (57.89%), Query Frame = 3
Query:  150 FHYSSLRTPPSVYDYDMDMG-ISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL 713
            + ++S  +P  +Y  D+    +  +   E  + G D  +Y T + +  + DGT+IP+ IV++K  +KLDGS P  LYGYG + I   P ++ SRL  +   G + A+A IRGGGE G  W++ G    K+N F DF   AEYLIK  Y + ++L I G S GGLL+ A  N RPDLF   +A V  +D+L
Sbjct:  396 YQFTSFLSPGVIYHCDLTKEELEPMVFREVTVKGIDAADYQTIQIFYPSKDGTKIPMFIVHKKG-IKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDML 584          
The following BLAST results are available for this feature:
BLAST of CK938434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PTRB_ECOLI1.441e-5752.58Protease 2 OS=Escherichia coli (strain K12) GN=ptr... [more]
PTRB_MORLA5.477e-5745.57Protease 2 OS=Moraxella lacunata GN=ptrB PE=3 SV=1[more]
PPCE_FLAME6.726e-3938.49Prolyl endopeptidase OS=Flavobacterium meningosept... [more]
PPCE_AERHY8.222e-3741.05Prolyl endopeptidase OS=Aeromonas hydrophila PE=1 ... [more]
PPCF_ELIMR1.074e-3641.05Prolyl endopeptidase OS=Elizabethkingia miricola P... [more]
Y4QF_RHISN6.515e-3439.01Uncharacterized peptidase y4qF OS=Rhizobium sp. (s... [more]
Y4SO_RHISN2.476e-3343.85Uncharacterized peptidase y4sO OS=Rhizobium sp. (s... [more]
PPCE_RAT9.407e-3340.63Prolyl endopeptidase OS=Rattus norvegicus GN=Prep ... [more]
PPCE_HUMAN2.737e-3240.63Prolyl endopeptidase OS=Homo sapiens GN=PREP PE=1 ... [more]
PPCE_MOUSE7.963e-3240.00Prolyl endopeptidase OS=Mus musculus GN=Prep PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004442_G08 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938434 ID=CK938434; Name=CK938434; organism=Citrus sinensis; type=EST; length=783bp
GGGGGGGTCTGCAAAAAATAACTACTTATCGTCTTCCAGCTGTAGGGGAG
CCACTCAAAAGCCTCCAAGGTGGCAAGTCTGTTGAATTTATAGATCCAGT
ATACTCAATCGATCCATCAGAATCAGTGTTTTCATCCAGGATTTTGCGGT
TTCATTATAGCTCATTGAGGACACCTCCTTCCGTATATGATTATGATATG
GACATGGGGATTTCTGTTTTGAAGAAAATTGAAACTGTCTTGGGAGGTTT
TGATACAAACAATTATTTTACTGAAAGGAAGTGGGCCAGTGCTTCAGATG
GCACACAGATTCCTATATGCATTGTCTATCGGAAGAATCTTGTGAAGCTT
GATGGATCAGATCCATTACTACTTTATGGCTATGGTTCGTATGAGATCTG
CAATGATCCTGCTTTCAACTCATCTCGGCTTTCTCTATTAGATCGTGGTT
TCATCTTTGCGATAGCTCAGATTCGGGGGGGTGGTGAATTGGGAAGACAG
TGGTACGAGAATGGGAAGTTTTTAAAGAAAAAGAATACCTTCACTGACTT
TATTGCCTGTGCTGAGTACTTGATAAAAAATTGCTACTGTACAAAGGAAA
AACTGTGTATTGAAGGAAGAAGTGCTGGGGGATTGCTTATTGGTGCTGTC
CTTAACATGAGGCCTGATTTGTTCAAGGCTGCAGTTGCAGCAGTCCCATT
CGTAGATGTCCTGACCACAATGCTGGATCCAACTATTCCTCTTACAACTG
CTGAGTGGGAGGAATGGGGTGATCCCCGGAAGG
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