CK938366

Overview
NameCK938366
Unique NameCK938366
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938366 vs. ExPASy Swiss-Prot
Match: POT8_ARATH (Potassium transporter 8 OS=Arabidopsis thaliana GN=POT8 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 8.404e-42
Identity = 92/163 (56.44%), Postives = 117/163 (71.78%), Query Frame = 1
Query:    4 IAEFIRSEKP-------QCSLGIEDVECDGKMTVVGTTSSNLDGIRMCEDDG-DFSQMAGTSELKELKNPEKLRKRVRFVVPESPRIDTDTREELQELMDAREAGMAFILGHCYVRAKSGSSLMKRLVINLGYDFLRRNSRGPTYALGIPCASTLEVGMIYLV 468
            IAEFIRS+KP       +   GI +     ++TVV  +SSNL+G+++ EDDG D  + + +SE+  +    + +KRVRFV+PES RID    EEL EL +AREAGMAFI+GH YVRAKSGSS+MK++ IN GYDFLRRNSRGP Y L  P ASTLEVGM+Y+V
Sbjct:  624 IAEFIRSDKPLNYSPDPENESGINE-----RLTVVAASSSNLEGVQIYEDDGSDKQEPSSSSEVIMVAPSPRFKKRVRFVLPESARIDRSAEEELTELTEAREAGMAFIMGHSYVRAKSGSSVMKKIAINFGYDFLRRNSRGPCYGLSTPHASTLEVGMVYIV 781          
BLAST of CK938366 vs. ExPASy Swiss-Prot
Match: POT6_ARATH (Potassium transporter 6 OS=Arabidopsis thaliana GN=POT6 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.813e-36
Identity = 85/161 (52.80%), Postives = 114/161 (70.81%), Query Frame = 1
Query:    4 IAEFIRSEKPQCSLGIE-DVECDGKMTVVGTTSSNLDGIR-MCEDDGDFSQMAGTSELK----ELKNPEKLRKRVRFVVPESPRIDTDTREELQELMDAREAGMAFILGHCYVRAKSGSSLMKRLVINLGYDFLRRNSRGPTYALGIPCASTLEVGMIYLV 468
            IAEFIR+E    +   E + E D +M+VVGT S+ + GI    E D D     GTSE++    + K+  K++KRVRFVVPE+P+I+ +TR+EL EL +ARE G+A+I+G+ Y++AK GS L+KRL IN+GY+FLRRN+RGP   L  P ASTLEVGMIY V
Sbjct:  622 IAEFIRTEAETAATAAETNGEDDDRMSVVGTCSTYMQGIEDHYESDIDDPDKPGTSEIRSPKPKKKSKSKVKKRVRFVVPETPKIEKETRQELMELTEAREGGVAYIMGNAYMKAKPGSGLLKRLAINIGYEFLRRNTRGPRNMLTSPHASTLEVGMIYNV 782          
BLAST of CK938366 vs. ExPASy Swiss-Prot
Match: HAK25_ORYSJ (Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.181e-33
Identity = 79/157 (50.32%), Postives = 106/157 (67.52%), Query Frame = 1
Query:    4 IAEFIRSEKPQCSLGIEDVE--CDGKMTVVGTTSSNLDGIRMCEDDGDFSQMAGTSELKELKNPEKLRKRVRFVVPESPRIDTDTREELQELMDAREAGMAFILGHCYVRAKSGSSLMKRLVINLGYDFLRRNSRGPTYALGIPCASTLEVGMIYLV 468
            IAEFIRS     +  +ED +  C+         SS  +GI +  +DG+    A   +  + +     RK+ RFV+P++ ++D++ R ELQELMDAREAGM+FILGH Y++AKSGSS +KR+VIN  Y+FLRRNSRGP+YA  IP ASTLEVGM+Y V
Sbjct:  621 IAEFIRSGDSHHNGVLEDTDKSCE-------KLSSISNGIPLWMEDGEVDASASPHKETDTQIISPNRKKARFVLPKNAQVDSEVRRELQELMDAREAGMSFILGHSYMKAKSGSSFIKRIVINFFYEFLRRNSRGPSYAATIPHASTLEVGMVYQV 770          
BLAST of CK938366 vs. ExPASy Swiss-Prot
Match: HAK10_ORYSJ (Potassium transporter 10 OS=Oryza sativa subsp. japonica GN=HAK10 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.075e-32
Identity = 96/197 (48.73%), Postives = 113/197 (57.36%), Query Frame = 1
Query:    4 IAEFIRS-----------EKPQ--CSLGIEDVECDG--KMTVVGTTSSNLDGIRMCEDDGDFSQMA------------------GTSELKELKNPEKL--------RKRVRFVVPE-SPRIDTDTREELQELMDAREAGMAFILGHCYVRAKSGSSLMKRLVINLGYDFLRRNSRGPTYALGIPCASTLEVGMIYLV 468
            +AEFIRS            KP+  C  G E+ E +   +M+V+ + S     IRM E+DG     +                  G    +E+ +P           RKRVRFV+P  SPR D   REELQELMDAREAGMAFILGH YV+AKSGSS  +RLVIN  YDFLRRNSRGP YA+ IP ASTLEVGMIY V
Sbjct:  652 VAEFIRSGAAAAADAAASSKPKNVCGGGAEESEKEEEERMSVIPSGS-----IRMMEEDGGAGAPSSEDTVGGSGSGSGRGSSRGGGGAREIMSPSPSPPPVVVAPRKRVRFVLPAASPRPDAGVREELQELMDAREAGMAFILGHSYVKAKSGSSFFRRLVINFCYDFLRRNSRGPNYAVTIPHASTLEVGMIYYV 843          
BLAST of CK938366 vs. ExPASy Swiss-Prot
Match: HAK24_ORYSJ (Potassium transporter 24 OS=Oryza sativa subsp. japonica GN=HAK24 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.147e-29
Identity = 77/160 (48.12%), Postives = 104/160 (65.00%), Query Frame = 1
Query:    4 IAEFIRSEKPQCSLGIEDVECDGKMTVVGTTSSNLDGIRMCEDDGDF--SQMAGTSELKELKNPEKLR---KRVRFVVPESPRIDTDTREELQELMDAREAGMAFILGHCYVRAKSGSSLMKRLVINLGYDFLRRNSRGPTYALGIPCASTLEVGMIYLV 468
            IAEFIR     C+   ++   DG        S    G+ + E++G+F  S   G+S  KE+ NP       KRVRF +P+  +ID + R ELQELM+AREAGM+FI G  +++AKSGS L+K++VIN GY+FLRRNSRGP +A+ +P  ST+EVGMI LV
Sbjct:  619 IAEFIR-----CADSNQNSFMDGASHSCEGLSFISKGLPLEEEEGEFDGSDSTGSSAHKEI-NPNTTAPKPKRVRFALPKDTKIDREVRGELQELMEAREAGMSFITGRSHMKAKSGSGLIKQIVINFGYEFLRRNSRGPAFAVNLPHVSTVEVGMICLV 772          
BLAST of CK938366 vs. ExPASy Swiss-Prot
Match: HAK7_ORYSJ (Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 1.348e-23
Identity = 61/167 (36.53%), Postives = 96/167 (57.49%), Query Frame = 1
Query:    4 IAEFIRSEKPQCSLGIEDVECDGKMTVVGTTSSNLDGIRMCEDDGDFS--QMAGTSELKELKNPEKL----------RKRVRFVVPESPRIDTDTREELQELMDAREAGMAFILGHCYVRAKSGSSLMKRLVINLGYDFLRRNSRGPTYALGIPCASTLEVGMIYLV 468
            IA+FI+ E  + +        +G+M V+ T  +   G+ M + + + S   +  +S  + L++ + +          R+RVRF + E  RID   R+EL +L+DA+EAG+ +I+GH YV+A+  S+ +K   I+  Y FLR+N RGP  AL IP  S +EVGMIY V
Sbjct:  645 IAKFIQMEAEEAASSGSYESSEGRMAVIHTEDTTGTGLVMRDSNNEASGTSLTRSSRSETLRSLQSIYEQESGSLSRRRRVRFEIAEEERIDPQVRDELADLLDAKEAGVTYIIGHSYVKARKNSNFLKTFAIDYAYSFLRKNCRGPAVALHIPHISLVEVGMIYYV 811          
BLAST of CK938366 vs. ExPASy Swiss-Prot
Match: POT2_ARATH (Potassium transporter 2 OS=Arabidopsis thaliana GN=POT2 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.122e-23
Identity = 61/147 (41.50%), Postives = 88/147 (59.86%), Query Frame = 1
Query:   67 DGKMTVVGTTSSNL-DGIRMCEDDGDFSQMAGTSELKELKNPEKLR--KRVRFVVPE----------SPRIDTDTREELQELMDAREAGMAFILGHCYVRAKSGSSLMKRLVINLGYDFLRRNSRGPTYALGIPCASTLEVGMIYLV 468
            + ++ V+GT +  + D ++       FS +    ++ ++  P      +RVRF V E          S   D + R EL++L+ A+EAG AFILGH +V+AK GSS+MKRL +N GY+FLRRN RGP  AL +P  S LEVGM+Y+V
Sbjct:  648 ESRLAVIGTVAYEIEDNLQPESVSIGFSTVESMEDVIQMAEPAPTATIRRVRFAVEENSYEDEGSTSSAEADAELRSELRDLLAAQEAGTAFILGHSHVKAKQGSSVMKRLAVNFGYNFLRRNCRGPDVALKVPPVSLLEVGMVYVV 794          
BLAST of CK938366 vs. ExPASy Swiss-Prot
Match: HAK9_ORYSJ (Probable potassium transporter 9 OS=Oryza sativa subsp. japonica GN=HAK9 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.737e-23
Identity = 64/142 (45.07%), Postives = 84/142 (59.15%), Query Frame = 1
Query:   61 ECDGKMTVVGTTSSNLDGIRMCEDDGDFSQMAGTS-----ELKELKNPEKLRKRVRFVVPE-SPRIDTDTREELQELMDAREAGMAFILGHCYVRAKSGSSLMKRLVINLGYDFLRRNSRGPTYALGIPCASTLEVGMIYLV 468
            E +  +TV+GT             DG  S  A  S     E+        + K+VRFVV   SP ++    EELQEL +AREAG AFILGH +V+ K GSSL+K+L + +GY+FLRRN RGP   L +P AS LEVGM+Y++
Sbjct:  647 ERENALTVIGTNPLRRCLSYEASHDGVSSVDAARSPNGIVEVPAAAAAAPVTKKVRFVVEAASPEVEKGVVEELQELCEAREAGTAFILGHSHVQTKPGSSLLKKLAVGVGYNFLRRNCRGPDVVLRVPPASLLEVGMVYVL 788          
BLAST of CK938366 vs. ExPASy Swiss-Prot
Match: HAK2_ORYSJ (Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20
Identity = 59/168 (35.12%), Postives = 87/168 (51.79%), Query Frame = 1
Query:    4 IAEFIRSEKPQCSLGIE-DVECDGKMTVVGTTSSNLDGIRMCEDDGDFSQMAGTSELK-----------ELKNPE-KLRKRVRFVVPESPRIDTDTREELQELMDAREAGMAFILGHCYVRAKSGSSLMKRLVINLGYDFLRRNSRGPTYALGIPCASTLEVGMIYLV 468
            I +FI  E    S     D   +G+M V+ TTS + D      D  D +        K           E ++P    R+RVRF +PE   +D   ++EL  L++A+  G+ +++GH Y++A+  SS  KR  I++GY FLR+N RGP+  L IP  S +EVGM Y V
Sbjct:  617 IGKFIMMEAEDASSSASYDTANEGRMAVI-TTSDDYDSPLAVRDSNDLADSMTMRSTKSESLRSLQSSYEQESPNVSRRRRVRFELPEEDDMDQQVKDELLALVEAKHTGVTYVMGHVYIKARKNSSFFKRFAIDVGYSFLRKNCRGPSVTLHIPHISLIEVGMAYQV 783          
BLAST of CK938366 vs. ExPASy Swiss-Prot
Match: POT4_ARATH (Potassium transporter 4 OS=Arabidopsis thaliana GN=POT4 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.181e-19
Identity = 62/171 (36.26%), Postives = 95/171 (55.56%), Query Frame = 1
Query:    4 IAEFIRSEKPQC-SLGIEDVECDGKMTVVGTTSSNLDGIRMCEDDGDFS------QMAGTSELKELKNP--------EKLRKRVRF-VVPESPRIDTDTREELQELMDAREAGMAFILGHCYVRAKSGSSLMKRLVINLGYDFLRRNSRGPTYALGIPCASTLEVGMIYLV 468
            IAEFI+ E     S   E    DG+M V+ +  S  + I    +  +        Q + +  L+ L++         +  R+ VRF +   S  + +  REEL +L+ A+EAG+A+I+GH YV+++  SS +K++ I++GY FLR+N RGP  AL IP  S +EVGMIY V
Sbjct:  619 IAEFIQMEASDLQSSASESQSNDGRMAVLSSQKSLSNSILTVSEVEEIDYADPTIQSSKSMTLQSLRSVYEDEYPQGQVRRRHVRFQLTASSGGMGSSVREELMDLIRAKEAGVAYIMGHSYVKSRKSSSWLKKMAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 789          
The following BLAST results are available for this feature:
BLAST of CK938366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
POT8_ARATH8.404e-4256.44Potassium transporter 8 OS=Arabidopsis thaliana GN... [more]
POT6_ARATH1.813e-3652.80Potassium transporter 6 OS=Arabidopsis thaliana GN... [more]
HAK25_ORYSJ4.181e-3350.32Potassium transporter 25 OS=Oryza sativa subsp. ja... [more]
HAK10_ORYSJ2.075e-3248.73Potassium transporter 10 OS=Oryza sativa subsp. ja... [more]
HAK24_ORYSJ2.147e-2948.13Potassium transporter 24 OS=Oryza sativa subsp. ja... [more]
HAK7_ORYSJ1.348e-2336.53Potassium transporter 7 OS=Oryza sativa subsp. jap... [more]
POT2_ARATH5.122e-2341.50Potassium transporter 2 OS=Arabidopsis thaliana GN... [more]
HAK9_ORYSJ8.737e-2345.07Probable potassium transporter 9 OS=Oryza sativa s... [more]
HAK2_ORYSJ1.822e-2035.12Probable potassium transporter 2 OS=Oryza sativa s... [more]
POT4_ARATH1.181e-1936.26Potassium transporter 4 OS=Arabidopsis thaliana GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004443_G12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IVF_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938366 ID=CK938366; Name=CK938366; organism=Citrus sinensis; type=EST; length=668bp
GGGATTGCCGAATTCATCCGTTCGGAGAAACCACAGTGCAGTTTAGGAAT
AGAAGACGTGGAATGCGACGGAAAAATGACAGTTGTTGGGACTACTTCGT
CAAACTTAGATGGCATAAGAATGTGTGAAGATGATGGAGATTTTTCCCAA
ATGGCAGGCACTTCTGAGCTGAAGGAGCTAAAGAACCCAGAGAAACTGAG
GAAGAGAGTGAGATTCGTTGTGCCAGAGAGTCCTCGGATTGATACAGACA
CAAGAGAGGAGTTACAAGAACTGATGGATGCAAGGGAGGCAGGAATGGCA
TTTATACTTGGACACTGTTACGTCAGAGCCAAGAGCGGGTCAAGTTTGAT
GAAGAGACTTGTGATAAACCTTGGATATGATTTCTTGAGAAGAAATTCCA
GGGGACCAACTTATGCACTCGGCATTCCCTGTGCATCTACTCTAGAGGTA
GGGATGATCTACCTTGTTTAAATTCCAGAATACATTATACTTATGCTTTT
GAGTCATATTGTATATGAAAGATCACAGCTTCAACCATAGATTATTCTGT
AGTCACTCGAAAATCATCATGTACAAGTGTAACCTGTACAAGTGTAACCT
TTCTATCATGCTTCCTTCACTCTTAAATTTTAGTTACAGTAAAAAAAAAA
AAAAAAAAAAAAAAAAAA
back to top