EL492704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EL492704 vs. ExPASy Swiss-Prot
Match: RN126_XENTR (RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.000e-19 Identity = 33/62 (53.23%), Postives = 50/62 (80.65%), Query Frame = 1 Query: 1 AMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 186 A+PT++IT+ H+ S CPVC++ + +G RQ+PCNH++H+DCI+PWL QH++CPVCR+ L Sbjct: 210 ALPTIQITEEHVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271
BLAST of EL492704 vs. ExPASy Swiss-Prot
Match: RN126_HUMAN (RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.000e-19 Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 1 AMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 186 A+PTV +T+ H+ S CPVC+D + LG RQ+PCNH++H CIVPWL QH+SCPVCR+ L Sbjct: 212 ALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 273
BLAST of EL492704 vs. ExPASy Swiss-Prot
Match: RN126_BOVIN (RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.613e-19 Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 1 AMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 186 A+PTV +T+ H+ S CPVC+D + LG RQ+PCNH++H CIVPWL QH+SCPVCR+ L Sbjct: 215 ALPTVPVTEEHVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 276
BLAST of EL492704 vs. ExPASy Swiss-Prot
Match: RN126_MOUSE (RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.457e-19 Identity = 35/62 (56.45%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 1 AMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 186 A+PTV +T+ H+ S CPVC++ + LG RQ+PCNH++H CIVPWL QH+SCPVCR+ L Sbjct: 214 ALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275
BLAST of EL492704 vs. ExPASy Swiss-Prot
Match: R126A_XENLA (RING finger protein 126-A OS=Xenopus laevis GN=rnf126-A PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.820e-19 Identity = 33/62 (53.23%), Postives = 50/62 (80.65%), Query Frame = 1 Query: 1 AMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 186 A+PT++IT+ H+ S CPVC++ + +G RQ+PCNH++H+DCI+PWL QH++CPVCR+ L Sbjct: 211 ALPTIQITEEHVGSGLECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
BLAST of EL492704 vs. ExPASy Swiss-Prot
Match: R126B_XENLA (RING finger protein 126-B OS=Xenopus laevis GN=rnf126-B PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.928e-19 Identity = 32/62 (51.61%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 1 AMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 186 A+PT++IT+ H+ CPVC++ + +G RQ+PCNH++H+DCI+PWL QH++CPVCR+ L Sbjct: 211 ALPTIQITEEHVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
BLAST of EL492704 vs. ExPASy Swiss-Prot
Match: RN115_MOUSE (RING finger protein 115 OS=Mus musculus GN=Rnf115 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.612e-16 Identity = 30/62 (48.39%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 1 AMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 186 ++PTV +TQ + + CPVC++ + + + RQ+PCNH +HS CIVPWL H++CPVCR+ L Sbjct: 212 SLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
BLAST of EL492704 vs. ExPASy Swiss-Prot
Match: RN115_HUMAN (RING finger protein 115 OS=Homo sapiens GN=RNF115 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.612e-16 Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 1 AMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 186 ++PTV +TQ + CPVC++ + + E RQ+PCNH +HS CIVPWL H++CPVCR+ L Sbjct: 211 SLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
BLAST of EL492704 vs. ExPASy Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase rnf181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.484e-14 Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 1 Query: 1 AMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 189 ++P V +T + CPVC +FE G RQ+PC H++HS CI+PWL + NSCP+CR ELP Sbjct: 62 SLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELP 124
BLAST of EL492704 vs. ExPASy Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase rnf181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.531e-14 Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 1 Query: 1 AMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 189 ++P V +T + CPVC +FE G RQ+PC H++HS CI+PWL + NSCP+CR ELP Sbjct: 62 SLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELP 124 The following BLAST results are available for this feature:
BLAST of EL492704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492704 ID=EL492704; Name=EL492704; organism=Citrus sinensis; type=EST; length=425bpback to top |