EL492702

Overview
NameEL492702
Unique NameEL492702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6922 contig Csv1_Contig6922:1..513. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EL492702 vs. ExPASy Swiss-Prot
Match: GGH_ARATH (Gamma-glutamyl hydrolase OS=Arabidopsis thaliana GN=GGH PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.497e-19
Identity = 45/65 (69.23%), Postives = 50/65 (76.92%), Query Frame = 2 
Query:  317 QKNDFEWGPKAILHIEDAIRVTQQAANLFISEARKSSNRPPTRKVLDNLIYNYSPTYCGKAGKGY 511
            +KN FEWG   I H EDAI+VTQ AAN  +SEARKS NRP ++KVL NLIYNY PTYCG AG GY
Sbjct:  270 EKNAFEWGSSKIPHSEDAIQVTQHAANHLVSEARKSLNRPESKKVLSNLIYNYKPTYCGYAGIGY 334
[Close]
BLAST of EL492702 vs. ExPASy Swiss-Prot
Match: GGH_SOYBN (Gamma-glutamyl hydrolase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.451e-16
Identity = 42/66 (63.64%), Postives = 47/66 (71.21%), Query Frame = 2 
Query:  317 QKNDFEWGPKAIL-HIEDAIRVTQQAANLFISEARKSSNRPPTRKVLDNLIYNYSPTYCGKAGKGY 511
            +KN FEW       H EDAIRVTQ  AN FISEARKS+N P  +KV D+LIYNY PT+ G AGKGY
Sbjct:  270 EKNAFEWATSLKAPHTEDAIRVTQSTANFFISEARKSTNTPDAQKVRDSLIYNYKPTFGGTAGKGY 335
The following BLAST results are available for this feature:
BLAST of EL492702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GGH_ARATH1.497e-1969.23Gamma-glutamyl hydrolase OS=Arabidopsis thaliana G... [more]
GGH_SOYBN3.451e-1663.64Gamma-glutamyl hydrolase OS=Glycine max PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC5731 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC5731, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492702 ID=EL492702; Name=EL492702; organism=Citrus sinensis; type=EST; length=513bp
GATGAGTCCTGAGTAATCAAACCTTTTGAGCAACATTTGTGTGCTAAACT
CTAGATGTTTGTGATGTTGTGGACAAGCTGTCTGGCAACACTATTTACTT
CTCTCAAGATTATTTGATTTCAGGCCAAGCTACATTTTTTTATTTGGTAT
TCATGTCAAGTGTTACATCTTTCTGGTCAAGCTCTGTTTCTGTGTGGTTC
TATGAGAAAATATTTTTTTGTATTCATCGTGTTTCTCCAAGTCAGGTATT
TCCTAAACAAATTTCTTAGTAATGCAACTGATTCTGTTTAGAGGAAAAGA
CTGACCAAATATGCTGCAGAAAAATGATTTTGAATGGGGGCCAAAAGCAA
TTCTACACATAGAGGATGCCATTCGGGTGACTCAACAAGCTGCAAACCTT
TTTATAAGCGAGGCTAGGAAGTCATCAAACAGGCCACCTACTCGAAAAGT
ACTTGACAACCTCATTTACAATTACAGTCCCACCTACTGCGGGAAGGCTG
GGAAGGGATATGA
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