CX069892

Overview
NameCX069892
Unique NameCX069892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length500
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3404 contig Csv1_Contig3404:457..956. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069892 vs. ExPASy Swiss-Prot
Match: IFRH_SOLTU (Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 5.789e-29
Identity = 61/82 (74.39%), Postives = 71/82 (86.59%), Query Frame = -3
Query:  253 VSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 498
            VSLWE+K GK LE+ YV EEQ+LKNIQEA+ P NV LSIYH+AFVKG  TNF+IEPSFGVEAS++YPDVKYT +DE LNQ+V
Sbjct:  227 VSLWEKKTGKNLERLYVPEEQVLKNIQEASVPMNVGLSIYHTAFVKGDHTNFEIEPSFGVEASEVYPDVKYTPIDEILNQYV 308          
BLAST of CX069892 vs. ExPASy Swiss-Prot
Match: IFRH_MAIZE (Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.276e-25
Identity = 53/82 (64.63%), Postives = 69/82 (84.15%), Query Frame = -3
Query:  253 VSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 498
            +SLWE+K GKT  +EYV EE +LK IQE+  P N+IL+I H+AFV+G QT F+I+P+ GV+AS+LYPDVKYTTVDEYLN+F+
Sbjct:  228 LSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL 309          
BLAST of CX069892 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.071e-25
Identity = 56/81 (69.14%), Postives = 68/81 (83.95%), Query Frame = -3
Query:  256 VSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQF 498
            V+LWE+KIGK+LEK ++ EEQLLK+IQE+  P NV+LSI H+ FV G  TN  IEPSFGVEAS+LYPDVKYT+VDEYL+ F
Sbjct:  230 VTLWEKKIGKSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNG-DTNISIEPSFGVEASELYPDVKYTSVDEYLSYF 309          
BLAST of CX069892 vs. ExPASy Swiss-Prot
Match: IFR_MEDSA (Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.607e-24
Identity = 51/82 (62.20%), Postives = 68/82 (82.93%), Query Frame = -3
Query:  253 VSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 498
            ++LWE+KIGKTLEK YVSEEQ+LK+IQE++ PHN +L++YHS  +KG    ++I+P+  +EAS+ YPDV YTT DEYLNQFV
Sbjct:  238 IALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKG-DAVYEIDPAKDIEASEAYPDVTYTTADEYLNQFV 318          
BLAST of CX069892 vs. ExPASy Swiss-Prot
Match: IFR_PEA (Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.634e-23
Identity = 51/82 (62.20%), Postives = 66/82 (80.49%), Query Frame = -3
Query:  253 VSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 498
            ++LWE+KIGKTLEK YVSEEQ+LK+IQ ++ PHN +L++YHS  +KG    ++I+P+  VEA   YPDVKYTT DEYLNQFV
Sbjct:  238 IALWEKKIGKTLEKTYVSEEQVLKDIQTSSFPHNYLLALYHSQQIKG-DAVYEIDPAKDVEAYDAYPDVKYTTADEYLNQFV 318          
BLAST of CX069892 vs. ExPASy Swiss-Prot
Match: IFR_CICAR (Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 6.854e-22
Identity = 49/82 (59.76%), Postives = 64/82 (78.05%), Query Frame = -3
Query:  253 VSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 498
            VSLWE+KIGKTLEK Y+SEE++LK+I  +  PHN +L++YHS  +KG    ++I+P+   EA  LYPDVKYTT DEYL+QFV
Sbjct:  238 VSLWEKKIGKTLEKSYISEEKVLKDINVSTFPHNYLLALYHSQQIKG-DAVYEIDPAKDAEAYDLYPDVKYTTADEYLDQFV 318          
BLAST of CX069892 vs. ExPASy Swiss-Prot
Match: IFRH_TOBAC (Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.605e-21
Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = -3
Query:  253 VSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 498
            VSLWE KIGKTLEK Y+SEE +L+ +QE   P    L+I HS FV G   NF+++P  GVEA++LYP VKYTTVDE+ N+FV
Sbjct:  229 VSLWEDKIGKTLEKLYLSEEDILQIVQEGPLPLRTNLAICHSVFVNGDSANFEVQPPTGVEATELYPKVKYTTVDEFYNKFV 310          
BLAST of CX069892 vs. ExPASy Swiss-Prot
Match: IGS1_PETHY (Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13
Identity = 32/78 (41.03%), Postives = 51/78 (65.38%), Query Frame = -3
Query:  265 VSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYL 498
            VS WE+  G TL+  ++SE++++K  +    P N+  SI H+ F+ G Q +F++     +EAS+LYP+  YT+VDEYL
Sbjct:  226 VSSWEKTTGSTLKMTHISEQEIIKLSESINFPENIHASILHNIFIAGAQLSFELTQDHDLEASELYPNYNYTSVDEYL 303          
BLAST of CX069892 vs. ExPASy Swiss-Prot
Match: EGS1_OCIBA (Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.923e-12
Identity = 33/82 (40.24%), Postives = 54/82 (65.85%), Query Frame = -3
Query:  253 VSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 498
            +S WE+KIGK  +K +V EE+++   +E   P N+ ++I H  F+ G   ++  + +  VEAS LYP++K+TT+DE L+ FV
Sbjct:  223 ISRWEKKIGKKFKKIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFKEN-DVEASTLYPELKFTTIDELLDIFV 303          
BLAST of CX069892 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.871e-11
Identity = 32/81 (39.51%), Postives = 48/81 (59.26%), Query Frame = -3
Query:  253 SLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 495
            SLWE+KIG+TL +  V+ ++LL +  E   P +++ S  H  F+ G Q NF I+    VE   LYPD K+ ++D+    FV
Sbjct:  237 SLWEKKIGRTLPRFTVTADKLLAHAAENIIPESIVSSFTHDIFINGCQVNFSIDEHSDVEIDTLYPDEKFRSLDDCYEDFV 317          
The following BLAST results are available for this feature:
BLAST of CX069892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
IFRH_SOLTU5.789e-2974.39Isoflavone reductase homolog OS=Solanum tuberosum ... [more]
IFRH_MAIZE2.276e-2564.63Isoflavone reductase homolog IRL OS=Zea mays GN=IR... [more]
IFRH_ARATH5.071e-2569.14Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]
IFR_MEDSA5.607e-2462.20Isoflavone reductase OS=Medicago sativa GN=IFR PE=... [more]
IFR_PEA3.634e-2362.20Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 ... [more]
IFR_CICAR6.854e-2259.76Isoflavone reductase OS=Cicer arietinum GN=IFR PE=... [more]
IFRH_TOBAC2.605e-2159.76Isoflavone reductase homolog A622 OS=Nicotiana tab... [more]
IGS1_PETHY9.920e-1341.03Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 P... [more]
EGS1_OCIBA4.923e-1240.24Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=... [more]
LAR_DESUN1.871e-1139.51Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_13E06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13E06-I11-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069892 ID=CX069892; Name=CX069892; organism=Citrus sinensis; type=EST; length=500bp
GCCCAACCCACGCACCCACCTGATCATGATGGCTTTATAACTACTACTCT
CAAATCAAGTACATGGCCTACTTCATTTGATCACTGACATAGCAAACATA
ATATGGTCTAACAAATTCCATGGACAACCAGAAGAAAGTAAGGCCAACAA
CCATAATTTTTACATATAAAACCAAAGATGGCAACAAGCCAATTATTTAT
TTACCAAGAGTCCAAGATCCTGCAAGCTGCAGCTGGAAACAGAGAAGGGT
TACACAAACTGATTGAGGTACTCATCAACTGTAGTGTACTTGACATCAGG
ATAAAGCTGCGAGGCTTCAACTCCAAAAGATGGTTCAATCTTGAAGTTGG
TTTGAACTCCCTTCACGAAAGCAGAGTGATAAATTGATAATATCACATTG
TGTGGAGGTGCAGCTTCTTGAATATTCTTTAGGAGCTGCTCCTCTGAAAC
ATACTCCTTTTCGAGGGTTTTACCAATCTTTCTCTCCCACAGAGACACAA
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