CK937773

Overview
NameCK937773
Unique NameCK937773
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: PIGM_ARATH (GPI mannosyltransferase 1 OS=Arabidopsis thaliana GN=PIGM PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 8.395e-80
Identity = 143/190 (75.26%), Postives = 154/190 (81.05%), Query Frame = 3
Query:  240 INIRSLLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSIIHRSWGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFRXXXXXXXXXXXXXXXXXFFRSGLKP 809
            +  RSLL  S + RV LIVYGEWQD+HMEVRYTDVDY+VFSDAASLMASG+SPYKRTTYRYSPLLA  L PNS  HRSWGKFLFSASDLLVG FIH ILK RKVPE +C YSV+VWLFNPFTFTIGTRGNCEPIVCAMILWII+CL++GN+LQAAFWYGLVVHFR                  FRSG KP
Sbjct:   16 MKFRSLLVFSMLLRVFLIVYGEWQDAHMEVRYTDVDYIVFSDAASLMASGESPYKRTTYRYSPLLALLLTPNSFFHRSWGKFLFSASDLLVGWFIHKILKQRKVPEKICTYSVMVWLFNPFTFTIGTRGNCEPIVCAMILWIILCLMQGNLLQAAFWYGLVVHFRVYPIIYALPIILVLDTQVFRSGQKP 205          
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: PIGM_DICDI (GPI mannosyltransferase 1 OS=Dictyostelium discoideum GN=pigm PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.440e-36
Identity = 68/164 (41.46%), Postives = 109/164 (66.46%), Query Frame = 3
Query:  249 RSLLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSIIHRSWGKFLFSASDLLVGVFIHSIL--KLRKVPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFR 734
            +S+  +  + R++LIV+ EWQD++M V+YTD+DY+V++DA+  + +G SPY R+TYRY+PLLA+ L+PN +IH ++GK LF   D+++   +  IL  +  K+     +  +  WL NPF+  + TRGN E ++ AM+L     L K N+  A+ +YGL VHF+
Sbjct:   26 KSIFIVGLVIRLVLIVFAEWQDANMLVKYTDIDYVVYTDASRAVVNGLSPYDRSTYRYTPLLAYLLVPNILIHPAFGKLLFVICDMIIAYLLKGILLERFPKITSRTLLICLASWLLNPFSINVSTRGNAESVIGAMVLASFYFLTKKNLTLASIFYGLSVHFK 189          
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: PIGM_XENTR (GPI mannosyltransferase 1 OS=Xenopus tropicalis GN=pigm PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.518e-31
Identity = 65/152 (42.76%), Postives = 93/152 (61.18%), Query Frame = 3
Query:  279 RVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSIIHRSWGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFR 734
            R  L+++G +QD  M V+YTDVDY VF+DAA  +  G SPYKR TYRY+PLLA+ L PN  +   +GK LF   DLL    IH IL  R + +   +Y   +WLFNP    + +RGN E ++  ++L ++  + K  +++ A  YGL VH +
Sbjct:   25 RSALVLFGVYQDQTMLVKYTDVDYHVFTDAAEYLTQGVSPYKRATYRYTPLLAWILTPNIYVTELYGKMLFVCCDLLAAYLIHRILVDRGIKDSASLY-CAIWLFNPLPMVVSSRGNAESVLAVLVLSVLYYVQKRRLIKGALIYGLSVHMK 175          
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: GPI14_DEBHA (GPI mannosyltransferase 1 OS=Debaryomyces hansenii GN=GPI14 PE=3 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 7.206e-31
Identity = 68/176 (38.64%), Postives = 112/176 (63.64%), Query Frame = 3
Query:  231 MISINIRSLLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSIIHR--SWGKFLFSASDLLVGVFIHSILK-----LRKVPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLL-KGNVLQAAFWYGLVVHFR 734
            M+ ++I  ++ LS + R+   ++G +QD +M V+YTD+DY+VFSDAA+ + +G SPY R TYRY+PLLA+ LIPN    +  ++GK++F  SDL+ G+ I  +L       +K+  +  +    +WL NP   TI TRG+ E ++  MI+  +  L+ K +++ + FW GL +HF+
Sbjct:    1 MLQLSISHIIVLSLLIRIGFFLFGLYQDKYMTVKYTDIDYVVFSDAANYVYNGYSPYSRETYRYTPLLAWMLIPNCWGGQWSNFGKYIFMISDLITGIIILKLLSGISIAGKKLSTNKIIMLSSIWLLNPMVITISTRGSSESVLTVMIMLSLYYLINKKSIIASGFWLGLSIHFK 176          
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: PIGM_DANRE (GPI mannosyltransferase 1 OS=Danio rerio GN=pigm PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.577e-30
Identity = 63/160 (39.38%), Postives = 96/160 (60.00%), Query Frame = 3
Query:  255 LLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSIIHRSWGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFR 734
            L   +A+ R++L+  G +QD  ++++YTDVDY VF+DAA  +  G+SPY+R+T+RY+PLLA  L+PN  +   +GK LF   DLL G+ +  +L LR         S  +WL NP    + TRGN E ++  ++L  ++CL       AA  +GL VH +
Sbjct:    8 LFGAAALLRLLLLCVGVYQDQTLKLKYTDVDYHVFTDAARFITQGESPYRRSTFRYTPLLALLLVPNVYLSLLFGKLLFGFCDLLSGLLMFRLLVLRGASHGSACVSCGLWLLNPLPMAVSTRGNAESVLAVLVLSTLLCLQLRKHTTAALLFGLSVHMK 167          
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: PIGM_MACFA (GPI mannosyltransferase 1 OS=Macaca fascicularis GN=PIGM PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.671e-30
Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = 3
Query:  279 RVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSIIHRSWGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFR 734
            RV L+ YG +QD  + VRYTD+DY VF+DAA  +A G SPY R TYRY+PLL + L PN  +   +GKFLF + DLL    ++ +L L+ +         V WL NP    + +RGN + IV +++L ++  + K  V  AA +YG  VH +
Sbjct:   29 RVALVFYGVFQDRTLHVRYTDIDYQVFTDAARFVAEGRSPYLRATYRYTPLLGWLLTPNIYLSELFGKFLFISCDLLTAFLLYRLLLLKGLARRQACGYCVFWLLNPLPMAVSSRGNADSIVASLVLMVLYLIRKRVVACAAVFYGFAVHMK 180          
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: GPI14_CANGA (GPI mannosyltransferase 1 OS=Candida glabrata GN=GPI14 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.671e-30
Identity = 69/173 (39.88%), Postives = 96/173 (55.49%), Query Frame = 3
Query:  231 MISINIRSLLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSII-HRSWGKFLFSASDLLVGVFIHSILKLRK----VPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFR 734
            M  +    LL L+ + R+   ++G +QD H  V+YTD+DY VF+DAA  +A   SPY R TYRY+PLL++ L+PN +I    +GK +F   DL  GV I  +LK  K       D       +WL NP   TI TRGN E ++C +IL  + C L    L     +GL +HF+
Sbjct:    1 MFKLGTIGLLSLAVLLRIAFFLFGVYQDEHFTVKYTDIDYQVFNDAAWFVAHRKSPYNRDTYRYTPLLSWLLLPNHMIPWFHFGKLIFVLCDLATGVLILQMLKKLKSKYRYGTDRMTIMAAIWLLNPMVITISTRGNAESVLCFLILSFLYCFLCEQYLLGGLLFGLSIHFK 173          
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: GPI14_KLULA (GPI mannosyltransferase 1 OS=Kluyveromyces lactis GN=GPI14 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.101e-30
Identity = 69/164 (42.07%), Postives = 101/164 (61.59%), Query Frame = 3
Query:  255 LLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSIIHRSW---GKFLFSASDLLVGVFIHSILK-LRKVPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFR 734
            LL +S + R+    YG +QDSH +V+YTD+DY VF DAA  + +G SPY R TYRY+PLL+F L+PN   +  W   GK  F   DL+ GV I  +L+   ++ + L + S  +WL NP   TI TRGN E ++C +I+  +  L +  +L +  +YGL +HF+
Sbjct:    8 LLTVSLLLRIGFFSYGIFQDSHFDVKYTDIDYFVFHDAAGYVNNGQSPYLRDTYRYTPLLSFLLLPN--YYLKWIHMGKVFFVLFDLITGVMIIKLLQGSCQLTKQLILAS--IWLLNPIVITISTRGNAESVLCFLIICALYFLKRDRLLISGLFYGLSIHFK 167          
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: PIGM_CHICK (GPI mannosyltransferase 1 OS=Gallus gallus GN=PIGM PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.041e-29
Identity = 68/164 (41.46%), Postives = 97/164 (59.15%), Query Frame = 3
Query:  246 IRSLLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSIIHRSWGKFLFSASDL-LVGVFIHSILKLRKVPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFR 734
            +R+ L    + R+ L++YG +QD+ M VRYTDVDY VF+DAA L+  G SPY+R T+RY+PLLA+ L PN  +   +GK LF A DL   GV   ++ +    P   C      WL NP    + +RGN E +V  ++L  +  +  G+V +AA  YGL VH +
Sbjct:    8 LRAALGAGLLARLSLVLYGLYQDAVMRVRYTDVDYRVFTDAARLVTQGRSPYRRATFRYTPLLAWLLTPNVHLGELFGKLLFVAGDLAAAGVAYRALRRRGASPGRACGCCAAAWLLNPLPMAVSSRGNAEALVAVLVLAALHLVEAGSVGRAALCYGLAVHLK 171          
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: PIGM_PONAB (GPI mannosyltransferase 1 OS=Pongo abelii GN=PIGM PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.775e-29
Identity = 63/152 (41.45%), Postives = 90/152 (59.21%), Query Frame = 3
Query:  279 RVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSIIHRSWGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFR 734
            RV L+ YG +QD  + VRYTD+DY VF+DAA  +  G SPY R TYRY+PLL + L PN  +   +GKFLF + DLL    ++ +L L+ +         V WL NP    + +RGN + IV +++L ++  + K  V  AA +YG  VH +
Sbjct:   29 RVALVFYGVFQDRTLHVRYTDIDYQVFTDAARFVTEGRSPYLRATYRYTPLLGWLLTPNIYLSELFGKFLFISCDLLTAFLLYRLLLLKGLGRRQACGYCVFWLLNPLPMAVSSRGNADSIVASLVLMVLYLIKKRLVACAAVFYGFAVHMK 180          
The following BLAST results are available for this feature:
BLAST of CK937773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
PIGM_ARATH8.395e-8075.26GPI mannosyltransferase 1 OS=Arabidopsis thaliana ... [more]
PIGM_DICDI7.440e-3641.46GPI mannosyltransferase 1 OS=Dictyostelium discoid... [more]
PIGM_XENTR5.518e-3142.76GPI mannosyltransferase 1 OS=Xenopus tropicalis GN... [more]
GPI14_DEBHA7.206e-3138.64GPI mannosyltransferase 1 OS=Debaryomyces hansenii... [more]
PIGM_DANRE3.577e-3039.38GPI mannosyltransferase 1 OS=Danio rerio GN=pigm P... [more]
PIGM_MACFA4.671e-3042.11GPI mannosyltransferase 1 OS=Macaca fascicularis G... [more]
GPI14_CANGA4.671e-3039.88GPI mannosyltransferase 1 OS=Candida glabrata GN=G... [more]
GPI14_KLULA6.101e-3042.07GPI mannosyltransferase 1 OS=Kluyveromyces lactis ... [more]
PIGM_CHICK1.041e-2941.46GPI mannosyltransferase 1 OS=Gallus gallus GN=PIGM... [more]
PIGM_PONAB1.775e-2941.45GPI mannosyltransferase 1 OS=Pongo abelii GN=PIGM ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_B02 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937773 ID=CK937773; Name=CK937773; organism=Citrus sinensis; type=EST; length=814bp
GCGGGGAAACCTAATTCGTAACACTAACCGGTNNNCCACTCACGCTCTCA
CAAAAACAACTCAAACTCGTGAAAATTGCTACGTTGATATTGATATTGAA
ATCAATACAAGTCAGTTTCAGTTTTCTGATTATAAACCAAAATGGGTAAA
TGAAGAAATCCCATTTCTGTGATGCCGAGCCAGCTCCTGCTTTTTCAAAT
TTGCCGTCCGTCTCCCTGTCGCAGCTAGCAATGATATCAATAAATATCCG
TTCATTGCTCTGGCTCTCAGCCATTTTCCGTGTCATTCTCATTGTTTATG
GAGAATGGCAGGACTCCCATATGGAGGTTAGATATACAGATGTGGATTAT
CTTGTGTTTTCTGATGCTGCCTCCTTGATGGCCTCTGGAGACTCCCCGTA
CAAAAGAACTACATATCGATATTCACCGTTGCTAGCATTTTTTCTTATTC
CAAATTCAATTATTCATCGCTCGTGGGGAAAATTTCTTTTCTCAGCTTCA
GATTTACTTGTGGGTGTGTTTATTCATTCCATTTTGAAGCTACGGAAAGT
GCCTGAGGATCTATGCATGTATTCTGTAGTGGTGTGGCTCTTCAATCCAT
TTACCTTCACCATTGGGACCCGGGGGAACTGTGAGCCCATTGTTTGTGCC
ATGATTTTGTGGATCATTATCTGCCTTTTGAAGGGTAATGTGTTACAAGC
TGCATTTTGGTATGGACTTGTTGTCCATTTCAGAATTTACCCGATAATTT
ATGTGCTTCCTATTATCCTGATACTTGATCCACTTTTCTTCCGATCTGGT
TTGAAGCCCAGACT
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