EY665892

Overview
NameEY665892
Unique NameEY665892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665892 vs. ExPASy Swiss-Prot
Match: SFR2_ORYSJ (Beta-glucosidase-like SFR2, chloroplastic OS=Oryza sativa subsp. japonica GN=SFR2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.123e-16
Identity = 40/99 (40.40%), Postives = 56/99 (56.57%), Query Frame = 3
Query:  141 WPPSMSTPEWEHEFFFRLATAPSHVKDIINDAWLQIA*DDPRNNSYN-EDLEPADALMGATAGDGGYHLSPLPSNEVN-ETKNITNPAKLGIEAMIMGF 431
            +P S +    E  FFF LATAP+HV+D + DAWLQ A +   +++ N  D  P DALM + AGDGG   S   +   N   +    P ++ +EAM+ GF
Sbjct:   57 FPSSDADDSEEDNFFFGLATAPAHVEDRLEDAWLQFATETSCDDNGNVRDQRPVDALMASAAGDGGSQQSWRSTGGENIGDREQRKPLRVAMEAMLRGF 155          

HSP 2 Score: 33.113 bits (74), Expect = 9.123e-16
Identity = 19/52 (36.54%), Postives = 29/52 (55.77%), Query Frame = 2
Query:    8 VGSATQLSGILVTVTVAPNAFSFSCYLK*NLLPLRPPID*SADILASFYVDP 163
            V +A +L+ ++     A NA S++ Y + +L  +  PID SAD LA F   P
Sbjct:    7 VAAAARLAVLVAAAATAANAASYARYRRRHLRRIPSPIDESADPLADFRAFP 58          

HSP 3 Score: 23.8682 bits (50), Expect = 9.123e-16
Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 1
Query:  511 HCLTAWPNGPSPEKRLQIY 567
            H + AW N P P++RL+ +
Sbjct:  172 HNVAAWHNVPCPQERLRFW 190          
The following BLAST results are available for this feature:
BLAST of EY665892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SFR2_ORYSJ9.123e-1640.40Beta-glucosidase-like SFR2, chloroplastic OS=Oryza... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-H06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665892 ID=EY665892; Name=EY665892; organism=Citrus sinensis; type=EST; length=838bp
CGGACGCGTGGGATCGGCGACGCAGCTCTCCGGAATCTTGGTGACGGTGA
CTGTGGCGCCTAACGCCTTCTCTTTTTCGTGTTATCTGAAATAAAATCTC
CTGCCGTTGCGTCCTCCAATTGACTAGTCTGCTGATATTCTGGCCTCCTT
CTATGTCGACCCCCGAATGGGAACATGAGTTTTTCTTCAGATTGGCTACC
GCTCCATCACATGTTAAGGACATAATTAATGATGCTTGGCTTCAGATTGC
ATAAGACGACCCGAGAAATAATTCATATAACGAGGATTTGGAACCTGCCG
ATGCATTAATGGGTGCAACTGCTGGTGATGGGGGGTATCATCTATCTCCA
TTACCGAGTAATGAAGTTAATGAGACGAAAAATATTACGAATCCTGCTAA
GTTAGGCATAGAAGCTATGATTATGGGATTTCCCAAGTGACATAGAAGTA
GATGAAAGAGAATAATGATCAGGATATTGTGAAGTACCAACCCAAAATGA
AGAAATCCATCACTGCCTAACTGCGTGGCCAAATGGTCCTAGCCCGGAAA
AAAGGCTACAAATTTATGGGCATATCCTGACATAAAAACTGAACCTTGGG
AAACCACCCTTGCGTCACAAGCTCACGAAATGCCATACGCTTCGTCGGAC
GACCAATGGAAAGCGTATTCTTAATGGAACTGGAAAAGGTTTACCTTTTT
ATGCCGCGAATTCCTACTCGCACCTCTTCAGATGGGGCCGGTTACCTTCC
CCATGTACTACCGCCTGGTCCCCTCTCTCACCGTAAGTCCCCCCCCCTCC
ACCCACCTTTCCGACCGCCCCCACGCTATACTCCATTC
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