EY665889

Overview
NameEY665889
Unique NameEY665889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665889 vs. ExPASy Swiss-Prot
Match: AROD2_ARATH (Arogenate dehydratase/prephenate dehydratase 2, chloroplastic OS=Arabidopsis thaliana GN=ADT2 PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.774e-77
Identity = 158/217 (72.81%), Postives = 168/217 (77.42%), Query Frame = 2
Query:   23 VSNGSRLRVAYQGVRGAYSESAAEKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKYVSFEQLKDAGGCC*LFCCSDLWFKYTC*GYSRMIVIM--------VTRISKWLAREPIIPRTDRPFKNKYSFLIKGGPG 649
            VSNGSR+RVAYQGVRGAYSESAAEKAYPNCEAVPCE+FDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRH LHIVGEVK AVRHCLLAN GV +EDL+RVLSHPQALAQCENTLTKLGLVREAVDDTAGAAK ++FE L DA         S+   K     Y   IV          VTR    LAREPIIP T+R FK    F ++ GPG
Sbjct:   93 VSNGSRVRVAYQGVRGAYSESAAEKAYPNCEAVPCEEFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHNLHIVGEVKLAVRHCLLANHGVNIEDLRRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKQIAFENLNDAAA-----VASEKAAKI----YGLNIVAKDIQDDCDNVTRF-LMLAREPIIPGTNRLFKTSIVFSLEEGPG 299          
BLAST of EY665889 vs. ExPASy Swiss-Prot
Match: AROD6_ARATH (Arogenate dehydratase/prephenate dehydratase 6, chloroplastic OS=Arabidopsis thaliana GN=ADT6 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.977e-63
Identity = 130/207 (62.80%), Postives = 151/207 (72.95%), Query Frame = 2
Query:   29 NGSRLRVAYQGVRGAYSESAAEKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKLGL--VREAVDDTAGAAKYVSFEQLKDAGGCC*LFCCSDLWFKYTC*GYSRMIVIMVTRISKWLAREPIIPRTDRPFKNKYSFLIKGG 643
            +GS LRVAYQGV GAYSE+AA KAYPNC+A+PC+QF+ AF+AVE W+ DRAVLP+ENSLGGSIHRNYDLLLRHRLHIVGEV+  V HCLLA PGV+ E L RV+SHPQ LAQCE+TLTKLGL   REAVDDTAGAA++++   L+D               +    G  +  V  VTR    LAREPIIPRTDRPFK    F  + G
Sbjct:  112 HGSNLRVAYQGVPGAYSEAAAGKAYPNCQAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEFLTRVISHPQGLAQCEHTLTKLGLNVAREAVDDTAGAAEFIASNNLRDTAAIASARAAEIYGLEILEDGI-QDDVSNVTRF-VMLAREPIIPRTDRPFKTSIVFAHEKG 316          
BLAST of EY665889 vs. ExPASy Swiss-Prot
Match: AROD3_ARATH (Arogenate dehydratase 3, chloroplastic OS=Arabidopsis thaliana GN=ADT3 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.521e-62
Identity = 127/207 (61.35%), Postives = 150/207 (72.46%), Query Frame = 2
Query:   29 NGSRLRVAYQGVRGAYSESAAEKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKLGL--VREAVDDTAGAAKYVSFEQLKDAGGCC*LFCCSDLWFKYTC*GYSRMIVIMVTRISKWLAREPIIPRTDRPFKNKYSFLIKGG 643
            +GS LRVAYQGV GAYSE+AA KAYPNC+A+PC+QF+ AF+AVE W+ DRAVLP+ENSLGGSIHRNYDLLLRHRLHIVGEV+  V HCL+A PGV+ E L RV+SHPQ LAQCE+TLTKLGL   REAVDDTAGAA++++   ++D               +    G  +     VTR    LAREPIIPRTDRPFK    F  + G
Sbjct:  117 HGSNLRVAYQGVPGAYSEAAAGKAYPNCQAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLIALPGVRKEFLTRVISHPQGLAQCEHTLTKLGLNVAREAVDDTAGAAEFIAANNIRDTAAIASARAAEIYGLEILEDGI-QDDASNVTRF-VMLAREPIIPRTDRPFKTSIVFAHEKG 321          
BLAST of EY665889 vs. ExPASy Swiss-Prot
Match: AROD1_ARATH (Arogenate dehydratase/prephenate dehydratase 1, chloroplastic OS=Arabidopsis thaliana GN=ADT1 PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.164e-57
Identity = 118/216 (54.63%), Postives = 150/216 (69.44%), Query Frame = 2
Query:    8 SVFNFVSNGSRLRVAYQGVRGAYSESAAEKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKYVSFEQLKDAGGCC*LFCCSDLWFKYTC*GYSRMIVIMVTRISKW--LAREPIIPRTDRPFKNKYSFLIKGGPG 649
            S+++   + S++R+++QG+ GAYSE+AA KA+PNCE VPCEQF+ AF+AVE WLVD+AVLPIENS+GGSIHRNYDLLLRHRLHIV EV   V HCLL  PGVK ED+K VLSHPQAL QC N+L  LG+ R +  DTA AA+ VS     D G    +   +     Y     +  I   V  ++++  LAREP+IPRTDRP+K    F ++ GPG
Sbjct:   95 SLYSSDGDDSKVRISFQGIPGAYSETAALKAFPNCETVPCEQFEAAFQAVELWLVDKAVLPIENSVGGSIHRNYDLLLRHRLHIVQEVHLPVNHCLLGVPGVKKEDIKCVLSHPQALDQCVNSLNNLGIQRISAKDTATAAQTVSSSGKIDVGAIASVRAAN----IYGLDILAENIQDDVNNVTRFLILAREPMIPRTDRPYKTSIVFSLEEGPG 306          
BLAST of EY665889 vs. ExPASy Swiss-Prot
Match: AROD4_ARATH (Arogenate dehydratase 4, chloroplastic OS=Arabidopsis thaliana GN=ADT4 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.212e-56
Identity = 121/202 (59.90%), Postives = 142/202 (70.30%), Query Frame = 2
Query:   29 NGSRLRVAYQGVRGAYSESAAEKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKL--GLVREAVDDTAGAAKYVSFEQLKDAGGCC*LFCCSDLWFKYTC*GYSRMIVIMVTRISKWLAREPIIPRTDRPFKNKYSF 628
            +GS LRVAYQGV GAYSE+AA KAYPNC+A+PC+QFD AF+AVE W+ DRAVLP+ENSLGGSIHRNYDLLLRHRLHIVGEV+  V HCLLA PGV+ + + RV+SHPQALAQ E++L  L     REA  DTA AA+Y+S   L D          ++L+         +     VTR    LAREPIIPRTDRPFK    F
Sbjct:  121 HGSSLRVAYQGVPGAYSEAAAGKAYPNCDAIPCDQFDVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQIPVHHCLLALPGVRTDCVSRVISHPQALAQTEHSLDVLTPHAAREAFHDTAAAAEYISANDLHDTAAVA-SARAAELYNLQILADGIQDDPGNVTRF-LMLAREPIIPRTDRPFKTSIVF 320          
BLAST of EY665889 vs. ExPASy Swiss-Prot
Match: AROD5_ARATH (Arogenate dehydratase 5, chloroplastic OS=Arabidopsis thaliana GN=ADT5 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.854e-56
Identity = 120/203 (59.11%), Postives = 139/203 (68.47%), Query Frame = 2
Query:   26 SNGSRLRVAYQGVRGAYSESAAEKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKL--GLVREAVDDTAGAAKYVSFEQLKDAGGCC*LFCCSDLWFKYTC*GYSRMIVIMVTRISKWLAREPIIPRTDRPFKNKYSF 628
            S+GS LRVAYQGV GAYSE+AA KAYPN EA+PC+QFD AF+AVE W+ DRAVLP+ENSLGGSIHRNYDLLLRHRLHIVGEV+  V HCLLA PGV+ + + RV+SHPQALAQ E +L KL      EA  DTA AA+Y++   L D               +    G  +     VTR    LAR+PIIPRTDRPFK    F
Sbjct:  121 SHGSTLRVAYQGVPGAYSEAAAGKAYPNSEAIPCDQFDVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQIPVHHCLLALPGVRTDCITRVISHPQALAQTEGSLNKLTPKAAIEAFHDTAAAAEYIAANNLHDTAAVASARAAELYGLQILADGI-QDDAGNVTRF-LMLARDPIIPRTDRPFKTSIVF 321          
BLAST of EY665889 vs. ExPASy Swiss-Prot
Match: PHEA_PSEST (P-protein OS=Pseudomonas stutzeri GN=pheA PE=4 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.724e-19
Identity = 51/139 (36.69%), Postives = 71/139 (51.08%), Query Frame = 2
Query:   41 LRVAYQGVRGAYSESAAEKAYPNCE-AVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTK--LGLVREAVDDTAGAAKYVSFE 448
            LRVAY G  G +S++AA K + +   + P    D  F  V    V+  V+P+ENS  G+++   D  L H + I GEV+  + H LL     K + + R+ SH Q+LAQC   L      + R AV   A AAK V  E
Sbjct:   95 LRVAYLGPEGTFSQAAALKHFGHSVISKPMAAIDEVFREVVAGAVNFGVVPVENSTEGAVNHTLDSFLEHDIVICGEVELRIHHHLLVGETTKTDRITRIYSHAQSLAQCRKWLDAHYPNVERVAVSSNADAAKRVKSE 233          

HSP 2 Score: 35.8094 bits (81), Expect = 2.724e-19
Identity = 31/93 (33.33%), Postives = 45/93 (48.39%), Query Frame = 3
Query:  468 AVASSSAAAIYGLNILAEDI---PG*L**WLLEFLNG*LGSPLFHARIDHSRTSIVFSLKEGPGGPLQAIAVFRFREITLPRIERRSFRNSRW 737
            A+A   AA +YGL+ LAE I   P     +L+      +GS       D  +TSI+ S++  PG   + +  F    I L RIE R  R+ +W
Sbjct:  238 AIAGDMAAQLYGLSKLAEKIEDRPVNSTRFLI------IGSQEVPPTGD-DKTSIIVSMRNKPGALHELLMPFHSNGIDLTRIETRPSRSGKW 323          
BLAST of EY665889 vs. ExPASy Swiss-Prot
Match: PHEA_PSEAE (P-protein OS=Pseudomonas aeruginosa GN=pheA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.355e-15
Identity = 50/139 (35.97%), Postives = 72/139 (51.80%), Query Frame = 2
Query:   41 LRVAYQGVRGAYSESAAEKAYPNCE-AVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTK--LGLVREAVDDTAGAAKYVSFE 448
            L+VAY G  G ++++AA K + N   + P    D  F  V    V+  V+P+ENS  G+++   D  L H + I GEV+  + H LL     K +++ R+ SH Q+LAQC   L      + R AV   A AAK V  E
Sbjct:   95 LKVAYLGPEGTFTQAAALKHFGNAVISTPMAAIDEVFREVAAGAVNFGVVPVENSTEGAVNHTLDSFLEHDMVICGEVELRIHHHLLVGETTKTDNITRIYSHAQSLAQCRKWLDSHYPSVERVAVSSNADAAKRVKSE 233          
BLAST of EY665889 vs. ExPASy Swiss-Prot
Match: PHEA_BUCAP (P-protein OS=Buchnera aphidicola subsp. Schizaphis graminum GN=pheA PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.770e-15
Identity = 43/116 (37.07%), Postives = 65/116 (56.03%), Query Frame = 2
Query:   50 AYQGVRGAYSESAA----EKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTK 385
            ++ G +G+YS  AA    E+ +  C    C  F+   ++VE    D AVLPIENS  G I+  +D+L +  L I+GE+  ++ HCLLA   +++  +K V SHPQ   QC   + K
Sbjct:  107 SFLGPKGSYSHIAASQYAEQNFKTCIENACLSFNEVIQSVENNQTDYAVLPIENSCSGFINEIFDILKKTNLFIIGEINISINHCLLAIKKIELNKIKAVYSHPQPFQQCSYFIKK 222          
BLAST of EY665889 vs. ExPASy Swiss-Prot
Match: PHEA_HAEIN (P-protein OS=Haemophilus influenzae GN=pheA PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 42/123 (34.15%), Postives = 65/123 (52.85%), Query Frame = 2
Query:   41 LRVAYQGVRGAYSESAAEKAYPNCEA----VPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKLGLV 397
            L +A+ G RG+YS  AA       +     + C+ F+  FE V+    D  VLP+EN+  G+I+  YDLL    L +VGE+ + ++HC+L N    +  +  + SHPQ + QC   +  L  V
Sbjct:  104 LHIAFLGKRGSYSNLAARNYAARYQKQFVELGCQSFEQVFEKVQTGEADFGVLPLENTTSGAINEVYDLLQHTDLSLVGELAYPIKHCVLVNDKTDLNQIDTLYSHPQVIQQCSQFIHSLDRV 226          
The following BLAST results are available for this feature:
BLAST of EY665889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
AROD2_ARATH2.774e-7772.81Arogenate dehydratase/prephenate dehydratase 2, ch... [more]
AROD6_ARATH2.977e-6362.80Arogenate dehydratase/prephenate dehydratase 6, ch... [more]
AROD3_ARATH2.521e-6261.35Arogenate dehydratase 3, chloroplastic OS=Arabidop... [more]
AROD1_ARATH4.164e-5754.63Arogenate dehydratase/prephenate dehydratase 1, ch... [more]
AROD4_ARATH1.212e-5659.90Arogenate dehydratase 4, chloroplastic OS=Arabidop... [more]
AROD5_ARATH7.854e-5659.11Arogenate dehydratase 5, chloroplastic OS=Arabidop... [more]
PHEA_PSEST2.724e-1936.69P-protein OS=Pseudomonas stutzeri GN=pheA PE=4 SV=... [more]
PHEA_PSEAE1.355e-1535.97P-protein OS=Pseudomonas aeruginosa GN=pheA PE=3 S... [more]
PHEA_BUCAP1.770e-1537.07P-protein OS=Buchnera aphidicola subsp. Schizaphis... [more]
PHEA_HAEIN5.150e-1534.15P-protein OS=Haemophilus influenzae GN=pheA PE=4 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-G11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665889 ID=EY665889; Name=EY665889; organism=Citrus sinensis; type=EST; length=780bp
CTTCGGCTCAGTTTTCAATTTTGTATCCAACGGGTCCCGCCTTCGAGTTG
CGTACCAGGGAGTTCGTGGAGCTTACAGCGAGTCAGCAGCAGAGAAAGCA
TACCCAAATTGCGAAGCGGTTCCTTGCGAGCAATTTGACACTGCTTTTGA
AGCTGTCGAGAGGTGGCTTGTAGACAGAGCAGTTTTACCCATTGAGAATT
CTTTGGGTGGCAGCATCCACAGAAATTATGATCTCTTACTCCGGCACAGG
TTGCACATAGTAGGGGAAGTTAAATTTGCTGTCCGACACTGCCTACTAGC
CAATCCTGGTGTTAAAGTTGAGGACTTGAAAAGGGTTCTAAGCCATCCTC
AGGCTCTTGCTCAATGTGAGAACACACTAACGAAATTAGGGTTAGTCAGG
GAAGCGGTGGACGATACTGCAGGTGCAGCAAAGTATGTATCATTCGAGCA
ACTAAAAGATGCGGGAGGCTGTTGCTAGCTCTTCTGCTGCAGCGATCTAT
GGTTTAAATATACTTGCTGAGGATATTCCAGGATGATTGTGATAATGGTT
ACTCGAATTTCTAAATGGCTAGCTAGGGAGCCCATTATTCCACGCACGGA
TAGACCATTCAAGAACAAGTATAGTTTTCTCATTAAAGGAGGGCCCGGGA
GGGCCTCTCCAGGCCATCGCTGTGTTTCGCTTTAGGGAAATCACCCTTCC
AAGAATTGAACGGCGCTCTTTTAGGAATTCGCGTTGGGCCGCCCTTTGAG
GAACACAGGGGGGTACGGAGAAATCCTCCC
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