CK937620
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937620 vs. ExPASy Swiss-Prot
Match: EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510 PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.157e-49 Identity = 102/188 (54.26%), Postives = 120/188 (63.83%), Query Frame = 2 Query: 83 AITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITI 646 A+TFSDLHTE G+KS++++L+GK+YISG+QL+ DD+KVYAAV VKP+D+FPNAS WY+SV+S+LA SFPGKAVGV+ VL+DVKPWDDETDMKKLEEAVR VEMPGLFWGASKLVPVGYGIKKL IM TI Sbjct: 2 AVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYESVASQLAKSFPGKAVGVQFGGSAAAAPAVEAEAPAAAADDDDDMDLFGDETEEEKKAAEEREAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTI 189
BLAST of CK937620 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 180.644 bits (457), Expect = 5.901e-45 Identity = 97/188 (51.60%), Postives = 113/188 (60.11%), Query Frame = 2 Query: 83 AITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITI 646 A+TF+DLHT GLK+L+Q+LSGK+Y+SGN ++KDDIKV+AAV KP FPNA+ WYD+V++ LA FPGKAVGV VLLDVKPWDDETDMKKLEEAVRSV+M GL WGASKLVPVGYGIKKLQIM+TI Sbjct: 2 AVTFTDLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTVAAALASRFPGKAVGVNLPGGGAASSAAAAAPAAKDADEDDDDLDLFGDETEEDKKAADERAASKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTI 189
BLAST of CK937620 vs. ExPASy Swiss-Prot
Match: EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110 PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 3.596e-26 Identity = 55/76 (72.37%), Postives = 66/76 (86.84%), Query Frame = 2 Query: 83 AITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGVR 310 A+TFSDLHTE GLK+L+++L+GK+YISG+QL+ DD+KVYAAVL P D FPNAS WYDSV+S LA SFPGKA GVR Sbjct: 2 AVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDSVASHLAKSFPGKADGVR 77 HSP 2 Score: 98.9821 bits (245), Expect = 2.258e-20 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 2 Query: 491 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITI 646 VLL+VKPWDDETDMKKLEEAVRSV+MPGL WGASKLVPVGYGIKKL IM+TI Sbjct: 142 VLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTI 193
BLAST of CK937620 vs. ExPASy Swiss-Prot
Match: EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 7.760e-21 Identity = 44/75 (58.67%), Postives = 63/75 (84.00%), Query Frame = 2 Query: 83 AITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGV 307 A+TFSDLHT GLK+L+ +L+GK+YISG+ +TKDD+KV+AAV +KP+ FPNA+ WYD+V++ ++ FPG+A GV Sbjct: 2 AVTFSDLHTADGLKALEAHLAGKTYISGDGITKDDVKVFAAVPLKPSAEFPNAARWYDTVAAAVSSRFPGQASGV 76 HSP 2 Score: 97.8265 bits (242), Expect = 5.030e-20 Identity = 45/52 (86.54%), Postives = 50/52 (96.15%), Query Frame = 2 Query: 491 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITI 646 VL+D+KPWDDETDMKKLEEAVRSV+M GL WGASKL+PVGYGIKKLQIM+TI Sbjct: 132 VLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLTI 183
BLAST of CK937620 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.949e-20 Identity = 45/52 (86.54%), Postives = 49/52 (94.23%), Query Frame = 2 Query: 491 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITI 646 VL+D+KPWDDETDMKKLEEAVRS++M GLFWGASKLVPVGYGIKKL IM TI Sbjct: 145 VLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTI 196
BLAST of CK937620 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.851e-20 Identity = 44/52 (84.62%), Postives = 50/52 (96.15%), Query Frame = 2 Query: 491 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITI 646 VL+D+KPWDDETDMKKLEEAV+S++M GLFWGASKLVPVGYGIKKLQI+ TI Sbjct: 145 VLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTI 196
BLAST of CK937620 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.121e-19 Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 2 Query: 491 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITI 646 VLLDVKPWDDETDM KLEEAVR+V+M GL WGASKLVPVGYGIKKLQIM+TI Sbjct: 140 VLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTI 191 HSP 2 Score: 67.0106 bits (162), Expect = 9.508e-11 Identity = 31/67 (46.27%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 83 AITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPS 283 AIT S++++E+GL+ LD+YL +SYISG Q +KDD+ V+ ++ PA S+ N + WYD +S+ L S Sbjct: 2 AITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLRSS 68
BLAST of CK937620 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.121e-19 Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 2 Query: 491 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITI 646 VLLDVKPWDDETDM KLEEAVR+V+M GL WGASKLVPVGYGIKKLQIM+TI Sbjct: 143 VLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTI 194
BLAST of CK937620 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 4.258e-19 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 491 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITI 646 VLLDVKPWDDETDM KLEEAVRS++M GL WGASKLV VGYGIKKLQIM+TI Sbjct: 140 VLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTI 191 HSP 2 Score: 68.5514 bits (166), Expect = 3.268e-11 Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 2 Query: 83 AITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRL 274 A+TF DL +E+GL+ LD+YL +SYISG Q +KDD+ V+AA+ P+ + N S WY+ V + L Sbjct: 2 AVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALL 65
BLAST of CK937620 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 8.031e-18 Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 2 Query: 491 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITI 646 VLLDVKPWDDETDMKKLEEAVRSV+ GL GASKLVPVGYGIKKL IM+TI Sbjct: 145 VLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTI 196 The following BLAST results are available for this feature:
BLAST of CK937620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937620 ID=CK937620; Name=CK937620; organism=Citrus sinensis; type=EST; length=647bpback to top |