CK937607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937607 vs. ExPASy Swiss-Prot
Match: LARP7_MOUSE (La-related protein 7 OS=Mus musculus GN=Larp7 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15 Identity = 46/130 (35.38%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 373 IIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPKCCGRVK 762 I KQV+++F D NL DK++ I K+++G+V IS++ SF K+K+LT + I AL+ SS++ + G +++R PL +D + TV VE LP++ + ++R+F + G + I I K G K Sbjct: 32 IAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLG-ERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPK 160
BLAST of CK937607 vs. ExPASy Swiss-Prot
Match: LAH1_YEAST (La protein homolog OS=Saccharomyces cerevisiae GN=LAH1 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15 Identity = 51/152 (33.55%), Postives = 84/152 (55.26%), Query Frame = 1 Query: 316 KDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKL----FTVLVENLPED--------HSVENMQRIFAEAGKIKSICIR 735 + NS T ++ R +KQVE+YFS+ N P D+++ KN +G+VPIS IA+F ++K+ R ++ ALR S +L VS++G+ VKR PL +T R+ ++ T+ V N P + EN++ F + G+I + +R Sbjct: 14 QSRRNSFAVIEFTPEVLDRCLKQVEFYFSEFNFPYDRFLRTTAEKN-DGWVPISTIATFNRMKKY-RPVDKVIEALRSSEILEVSADGENVKRRVPLDLTAARNARIEQNQRTLAVMNFPHEDVEASQIPELQENLEAFFKKLGEINQVRLR 163
BLAST of CK937607 vs. ExPASy Swiss-Prot
Match: LARP7_RAT (La-related protein 7 OS=Rattus norvegicus GN=Larp7 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15 Identity = 45/130 (34.62%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 373 IIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPKCCGRVK 762 I KQV+++F D NL D+++ I K+++G+V IS++ SF K+K+LT + I AL+ SS++ + G +++R PL +D + TV VE LP++ + ++R+F + G + I I K G K Sbjct: 33 IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLG-ERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPK 161
BLAST of CK937607 vs. ExPASy Swiss-Prot
Match: LARP7_MACFA (La-related protein 7 OS=Macaca fascicularis GN=LARP7 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15 Identity = 49/150 (32.67%), Postives = 83/150 (55.33%), Query Frame = 1 Query: 313 IKDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPKCCGRVK 762 ++ + S VL D I KQV+++F D NL D+++ I K+++G+V IS++ SF K+K+LT + I ALR S+++ + G +++R PL +D TV VE LP++ + ++R+F + G + I I K G K Sbjct: 23 VEKKKRSRVKQVLAD-----IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLG-ERPKDEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPK 166
BLAST of CK937607 vs. ExPASy Swiss-Prot
Match: LARP7_HUMAN (La-related protein 7 OS=Homo sapiens GN=LARP7 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15 Identity = 49/150 (32.67%), Postives = 83/150 (55.33%), Query Frame = 1 Query: 313 IKDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPKCCGRVK 762 ++ + S VL D I KQV+++F D NL D+++ I K+++G+V IS++ SF K+K+LT + I ALR S+++ + G +++R PL +D TV VE LP++ + ++R+F + G + I I K G K Sbjct: 23 VEKKKRSRVKQVLAD-----IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLG-ERPKDEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPK 166
BLAST of CK937607 vs. ExPASy Swiss-Prot
Match: LARP7_DANRE (La-related protein 7 OS=Danio rerio GN=larp7 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15 Identity = 44/144 (30.56%), Postives = 82/144 (56.94%), Query Frame = 1 Query: 301 CEDPIKDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICI 732 C D + +N L + KQVE++F D NL D++M ++I ++++G++ I+V+ +F ++K LT + I AL+ S+++ V+ G +++R PL T +D TV VE LP+ + ++R+F++ G + I I Sbjct: 22 CADLSEKKDNEKKKRSRVKQLLSDVKKQVEFWFGDVNLHKDRFMKSIIEQSRDGYIDIAVLTTFNRMKNLTADVKLIARALKNSTIVEVNDEGTRIRRKEPLGETP-KDVDSRTVYVELLPKTVTHIWLERVFSKCGHVVYISI 164
BLAST of CK937607 vs. ExPASy Swiss-Prot
Match: LARP7_XENTR (La-related protein 7 OS=Xenopus tropicalis GN=larp7 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14 Identity = 48/149 (32.21%), Postives = 84/149 (56.38%), Query Frame = 1 Query: 316 KDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPKCCGRVK 762 KD E V L I KQV+++F D NL D+++ I K ++G++ IS++ASF K+K++T + I A++ SS++ ++ +G K++R PL + +D TV VE LP++ + ++R+F + G + + I K G K Sbjct: 23 KDREKKKRSRV--KQLLADIAKQVDFWFGDVNLHKDRFLREQIEKTRDGYIDISLLASFNKMKKITTDSKLIARAVKNSSVVEINLSGTKIRRRFPLG-EKPQDVDSRTVYVELLPKNVTHSWIERVFGKYGMVVYVSIPRYKSTGDPK 168
BLAST of CK937607 vs. ExPASy Swiss-Prot
Match: LARP6_MOUSE (La-related protein 6 OS=Mus musculus GN=Larp6 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14 Identity = 47/176 (26.70%), Postives = 90/176 (51.14%), Query Frame = 1 Query: 304 EDPIKDHENSSTPAVLTD-------------DLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRD--------------PKLFTVLV---ENLPEDHSVENMQRIFAEAGKIKSICIRDP 741 E+P + H +++T D +L ++++ Q+E+YFSDENL D +++ +R+NK G+V + ++ SF+K+K LTR+ AL+ S L ++ + +KV+R P+P+ + PKL+ + ++ +E++ ++F G I S+ I P Sbjct: 60 EEPSRGHSSATTSGGENDREDLEPEWRPPDEELIRKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLELNEDHRKVRRTTPVPLFPNENLPSKMLLVYDLHLSPKLWALATPQKNGRVQEKVMEHLLKLFGTFGVISSVRILKP 235
BLAST of CK937607 vs. ExPASy Swiss-Prot
Match: LARP6_HUMAN (La-related protein 6 OS=Homo sapiens GN=LARP6 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14 Identity = 42/146 (28.77%), Postives = 82/146 (56.16%), Query Frame = 1 Query: 355 DDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRD--------------PKLFTVLV---ENLPEDHSVENMQRIFAEAGKIKSICIRDP 741 ++L ++++ Q+E+YFSDENL D +++ +R+NK G+V + ++ SF+K+K LTR+ AL+ S +L ++ + +KV+R P+P+ + PKL+ + ++ +E++ ++F G I S+ I P Sbjct: 90 EELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVVLELNEDHRKVRRTTPVPLFPNENLPSKMLLVYDLYLSPKLWALATPQKNGRVQEKVMEHLLKLFGTFGVISSVRILKP 235
BLAST of CK937607 vs. ExPASy Swiss-Prot
Match: LA_RAT (Lupus La protein homolog OS=Rattus norvegicus GN=Ssb PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 46/132 (34.85%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 361 LKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRES--SLLVVSSNGKKVKRLNPLPVTEV-----RDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIR 735 L+ +I Q+EYYF D NLP DK++ I K EG+VP+ + F +L RLT + IV AL +S +L+ VS++ K++R P+ EV D K +V ++ P D ++++++ + G+I +I +R Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQI-KLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKANLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLDDKGQILNIQMR 143 The following BLAST results are available for this feature:
BLAST of CK937607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937607 ID=CK937607; Name=CK937607; organism=Citrus sinensis; type=EST; length=790bpback to top |