CK937601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937601 vs. ExPASy Swiss-Prot
Match: RS29_ARATH (40S ribosomal protein S29 OS=Arabidopsis thaliana GN=RPS29A PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.683e-16 Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 2 Query: 2 GHSNVWNSHPKTYGPGSRACRVCGNPHAIIREYGLVCCRQ 121 GHSNVWNSHPK YGPGSR CRVCGN H +IR+YGL CCRQ Sbjct: 2 GHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQ 41
BLAST of CK937601 vs. ExPASy Swiss-Prot
Match: RS29_WHEAT (40S ribosomal protein S29 OS=Triticum aestivum GN=RPS29 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.311e-15 Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 2 Query: 2 GHSNVWNSHPKTYGPGSRACRVCGNPHAIIREYGLVCCRQ 121 GHSNVWNSHPK YG GSR CRVCGN H +IR+YGL+CCRQ Sbjct: 2 GHSNVWNSHPKNYGAGSRVCRVCGNSHGLIRKYGLMCCRQ 41
BLAST of CK937601 vs. ExPASy Swiss-Prot
Match: RS29_IXOSC (40S ribosomal protein S29 OS=Ixodes scapularis GN=RpS29 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.958e-11 Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 2 Query: 2 GHSNVWNSHPKTYGPGSRACRVCGNPHAIIREYGLVCCRQ 121 GH N+W SHP+ YGPGSR CRVC N H +IR+YGL CR+ Sbjct: 2 GHENIWYSHPRKYGPGSRYCRVCANHHGLIRKYGLNICRR 41
BLAST of CK937601 vs. ExPASy Swiss-Prot
Match: RS29_SPOFR (40S ribosomal protein S29 OS=Spodoptera frugiperda GN=RpS29 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.698e-11 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 2 Query: 2 GHSNVWNSHPKTYGPGSRACRVCGNPHAIIREYGLVCCRQ 121 GH+N+W SHP+ YG GSR+CR C N H +IR+YGL CRQ Sbjct: 2 GHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQ 41
BLAST of CK937601 vs. ExPASy Swiss-Prot
Match: RS29_PLUXY (40S ribosomal protein S29 OS=Plutella xylostella GN=RpS29 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.698e-11 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 2 Query: 2 GHSNVWNSHPKTYGPGSRACRVCGNPHAIIREYGLVCCRQ 121 GH+N+W SHP+ YG GSR+CR C N H +IR+YGL CRQ Sbjct: 2 GHANIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQ 41
BLAST of CK937601 vs. ExPASy Swiss-Prot
Match: RS29_SCALT (40S ribosomal protein S29 OS=Scarabaeus laticollis GN=RpS29 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.442e-11 Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 2 Query: 2 GHSNVWNSHPKTYGPGSRACRVCGNPHAIIREYGLVCCRQ 121 GH N+W SHP+ YG GSR+CR C N H +IR+YGL CRQ Sbjct: 2 GHQNIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQ 41
BLAST of CK937601 vs. ExPASy Swiss-Prot
Match: RS29_GRIJA (40S ribosomal protein S29 OS=Griffithsia japonica GN=RPS29 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.719e-11 Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 2 Query: 2 GHSNVWNSHPKTYGPGSRACRVCGNPHAIIREYGLVCCRQ 121 GH N+W SHP+ YG GSR+C++CGN H +IR+Y + CRQ Sbjct: 2 GHQNIWYSHPRKYGKGSRSCKICGNKHGLIRKYSMNICRQ 41
BLAST of CK937601 vs. ExPASy Swiss-Prot
Match: RS29_BOMMO (40S ribosomal protein S29 OS=Bombyx mori GN=RpS29 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.719e-11 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 2 Query: 2 GHSNVWNSHPKTYGPGSRACRVCGNPHAIIREYGLVCCRQ 121 GH+N+W SHP+ YG GSR+CR C N H +IR+YGL CRQ Sbjct: 2 GHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQ 41 The following BLAST results are available for this feature:
BLAST of CK937601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937601 ID=CK937601; Name=CK937601; organism=Citrus sinensis; type=EST; length=134bpback to top |